RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 PNMA5Q96PV4 448 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 SEPT5Q99719 369 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 USP26Q9BXU7 913 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 EVA1BQ9NVM1 165 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 THEGQ9P2T0 379 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 FAN1Q9Y2M0 1017 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 IPPQ9Y573 584 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 ZNF831Q5JPB2 1677 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 FAM205AQ6ZU69 1335 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 ZBTB7BO15156 539 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 NEMFO60524 1076 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 XYLBO75191 536 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 SELPP16109 830 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 POLR2BP30876 1174 aaKnown RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 ABCD1P33897 745 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 NOL9Q5SY16 702 aaKnown RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 BTBD8Q5XKL5 378 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 GSTA5Q7RTV2 222 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 LRP10Q7Z4F1 713 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 LCA5Q86VQ0 697 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 SPATA24Q86W54 205 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 CCDC63Q8NA47 563 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 SLC43A3Q8NBI5 491 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 DNAJB3Q8WWF6 145 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 HLA-CQ95604 372 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 ZSWIM4Q9H7M6 989 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 IL23AQ9NPF7 189 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 MRPL17Q9NRX2 175 aaKnown RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 TBC1D7Q9P0N9 293 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 GABBR1Q9UBS5 961 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 FAM198AQ9UFP1 575 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 PCDHB8Q9UN66 801 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 TNNQ9UQP3 1299 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 PCDHB13Q9Y5F0 798 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 TRPV2Q9Y5S1 764 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 AOX1Q06278 1338 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 POTEFA5A3E0 1075 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 CARNS1A5YM72 827 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 E7EVH7 732 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 TRAPPC3O43617 180 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 MCM4P33991 863 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 PRPHP41219 470 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 MYO1EQ12965 1108 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 TIGD5Q53EQ6 642 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 CNKSR3Q6P9H4 555 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 SPATA2LQ8IUW3 424 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 ZFPM1Q8IX07 1006 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 TTC30BQ8N4P2 665 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 TEX9Q8N6V9 391 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 PPP1R13LQ8WUF5 828 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 BHMTQ93088 406 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 RMDN2Q96LZ7 410 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 TIGD1Q96MW7 591 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 SAMD11Q96NU1 681 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 TGS1Q96RS0 853 aaKnown RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 UHRF1Q96T88 793 aaPredicted RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 SEC62Q99442 399 aaKnown RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 NAA15Q9BXJ9 866 aaKnown RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 DBNLQ9UJU6 430 aaKnown RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 BAZ2AQ9UIF9 1905 aaKnown RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 ARVCFO00192 962 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 NCAM2O15394 837 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 OPA1O60313 960 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 ALDH1A2O94788 518 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 PARNO95453 639 aaKnown RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 VTNP04004 478 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 TNNI1P19237 187 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 ZBTB16Q05516 673 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 NFIAQ12857 509 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 MTFR1Q15390 333 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 FAM133BQ5BKY9 247 aaKnown RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 APOBEC3HQ6NTF7 200 aaKnown RBP3.22□□□□□ -1.89
NEDD4-208ENST00000508342 LRRC8DQ7L1W4 858 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 TXNRD3Q86VQ6 643 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 BEST2Q8NFU1 509 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 ACER1Q8TDN7 264 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 ATRIPQ8WXE1 791 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 TCF25Q9BQ70 676 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 EPC1Q9H2F5 836 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 VPS54Q9P1Q0 977 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 PRR12Q9ULL5 1215 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 PCDHA4Q9UN74 947 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 DOLKQ9UPQ8 538 aa3.22□□□□□ -1.89
NEDD4-208ENST00000508342 ZMYM6O95789 1325 aa3.21□□□□□ -1.89
NEDD4-208ENST00000508342 NEDD4P46934 1319 aa3.21□□□□□ -1.89
NEDD4-208ENST00000508342 PHLPP2Q6ZVD8 1323 aa3.21□□□□□ -1.89
NEDD4-208ENST00000508342 CXCL14O95715 111 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 NDUFB10O96000 172 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 TIMP1P01033 207 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 EPB41P11171 864 aaKnown RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 RPL13P26373 211 aaKnown RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 EPHB3P54753 998 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 AK2P54819 239 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 TSTA3Q13630 321 aaPredicted RBP3.21□□□□□ -1.9
NEDD4-208ENST00000508342 GRIK4Q16099 956 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 GIMAP6Q6P9H5 292 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 HDDC3Q8N4P3 179 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 SAMD3Q8N6K7 520 aa3.21□□□□□ -1.9
NEDD4-208ENST00000508342 SKA2Q8WVK7 121 aaPredicted RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms