RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 GOPCQ9HD26 462 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 NLRC4Q9NPP4 1024 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 PPANQ9NQ55 473 aaKnown RBP5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 AAASQ9NRG9 546 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 IL17RBQ9NRM6 502 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 BLOC1S4Q9NUP1 217 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 SMARCAL1Q9NZC9 954 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 SAMD15Q9P1V8 674 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 BCCIPQ9P287 314 aaKnown RBP eCLIP5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 DDX20Q9UHI6 824 aaKnown RBP5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 SLC12A6Q9UHW9 1150 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 AMFRQ9UKV5 643 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 ODF2LQ9ULJ1 636 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 STX8Q9UNK0 236 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 WASF2Q9Y6W5 498 aa5.4□□□□□ -1.54
HMGB3P16-201ENST00000508037 SCN7AQ01118 1682 aa5.4□□□□□ -1.55
HMGB3P16-201ENST00000508037 KIAA1551Q9HCM1 1747 aa5.4□□□□□ -1.55
HMGB3P16-201ENST00000508037 A0A087X0T9 212 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 ESYT3A0FGR9 886 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 CCT8L1PA6NM43 557 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 H0YGN5 161 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 PDXKO00764 312 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 ST8SIA5O15466 376 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 SIAH2O43255 324 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 CYTH3O43739 400 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 PPFIA2O75334 1257 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 NOL4O94818 638 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 GGPS1O95749 300 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 AGTP01019 485 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 NUDT17P0C025 328 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 USP17L8P0C7I0 530 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 FAM228BP0C875 321 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 CYP2D6P10635 497 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 XRCC5P13010 732 aaKnown RBP5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 RASA1P20936 1047 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 RFX1P22670 979 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 ATP5DP30049 168 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 SCTRP47872 440 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 SEC24CP53992 1094 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 DRG2P55039 364 aaKnown RBP5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 RPS8P62241 208 aaKnown RBP5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 ERVK-9P63128 1117 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 ADAM9Q13443 819 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 EXOC3L4Q17RC7 722 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 ERMARDQ5T6L9 678 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 DENND2CQ68D51 928 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 ALKBH5Q6P6C2 394 aaKnown RBP5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 C16orf86Q6ZW13 317 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 ZNF804AQ7Z570 1209 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 SLFN11Q7Z7L1 901 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 CEP57Q86XR8 500 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 COL23A1Q86Y22 540 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 SLFN12Q8IYM2 578 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 FAM133AQ8N9E0 248 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 LRRC57Q8N9N7 239 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 TPCN2Q8NHX9 752 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 FAM174AQ8TBP5 190 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 MORC4Q8TE76 937 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 CUL5Q93034 780 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 TLCD1Q96CP7 247 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 HVCN1Q96D96 273 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 HOOK2Q96ED9 719 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 IFT74Q96LB3 600 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 ANKRD27Q96NW4 1050 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 NLRP3Q96P20 1036 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 SLC4A9Q96Q91 983 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 XPO6Q96QU8 1125 aaKnown RBP5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 FMO2Q99518 471 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 TMEM109Q9BVC6 243 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 RIOX1Q9H6W3 641 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 EHD2Q9NZN4 543 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 BIN2Q9UBW5 565 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 MTRF1LQ9UGC7 380 aaKnown RBP5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 ARMCX3Q9UH62 379 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 ADAMTS1Q9UHI8 967 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 DDX25Q9UHL0 483 aaKnown RBP5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 CNOT7Q9UIV1 285 aaKnown RBP5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 SALL4Q9UJQ4 1053 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 HDAC9Q9UKV0 1011 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 NOVA2Q9UNW9 492 aaKnown RBP5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 TRAF3IP3Q9Y228 551 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 NOC2LQ9Y3T9 749 aaKnown RBP5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 NFS1Q9Y697 457 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 PHLPP1O60346 1717 aa5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.39□□□□□ -1.55
HMGB3P16-201ENST00000508037 MYH1P12882 1939 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 BAZ2AQ9UIF9 1905 aaKnown RBP5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 ABCA3Q99758 1704 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 LOC102724428A0A0B4J2F2 783 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 PNMA6FA0A0J9YX94 578 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 MIF4GDA9UHW6 222 aaKnown RBP5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 F8VZ95 297 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 PODXLO00592 558 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 ADAMTS3O15072 1205 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 RGS16O15492 202 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 MGRN1O60291 552 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 TLR2O60603 784 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 AP1G2O75843 785 aa5.38□□□□□ -1.55
HMGB3P16-201ENST00000508037 SSBP05455 408 aaKnown RBP eCLIP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms