RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 FNDC1Q4ZHG4 1894 aaPredicted RBP10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 BTBD18B2RXH4 712 aa10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 WNT7AO00755 349 aa10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 P4HBP07237 508 aaKnown RBP10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 DARSP14868 501 aaKnown RBP10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 EIF4BP23588 611 aaKnown RBP10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 CTNNB1P35222 781 aa10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 QARSP47897 775 aaKnown RBP10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 RBM25P49756 843 aaKnown RBP10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 FAM189BP81408 668 aa10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 COL19A1Q14993 1142 aa10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 EPHA7Q15375 998 aa10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 SKIV2LQ15477 1246 aaKnown RBP10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 PTPROQ16827 1216 aa10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 AAK1Q2M2I8 961 aa10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 MTERF2Q49AM1 385 aa10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 SLC24A5Q71RS6 500 aa10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 DIS3L2Q8IYB7 885 aaKnown RBP10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 BANK1Q8NDB2 785 aa10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 P2RX5Q93086 422 aa10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 HLA-CQ95604 372 aa10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 LLPHQ9BRT6 129 aaKnown RBP10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 C11orf84Q9BUA3 381 aaPredicted RBP10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 PLVAPQ9BX97 442 aa10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 BRMS1Q9HCU9 246 aa10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 SEPT9Q9UHD8 586 aaPredicted RBP10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 MRPL42Q9Y6G3 142 aaKnown RBP10.19□□□□□ -0.78
PDLIM5-209ENST00000506632 DENND3A2RUS2 1198 aa10.18□□□□□ -0.78
PDLIM5-209ENST00000506632 DDX11L8A8MPP1 907 aa10.18□□□□□ -0.78
PDLIM5-209ENST00000506632 GRM6O15303 877 aa10.18□□□□□ -0.78
PDLIM5-209ENST00000506632 MAFO75444 373 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-209ENST00000506632 GATMP50440 423 aa10.18□□□□□ -0.78
PDLIM5-209ENST00000506632 KCNQ1P51787 676 aa10.18□□□□□ -0.78
PDLIM5-209ENST00000506632 TIGD5Q53EQ6 642 aa10.18□□□□□ -0.78
PDLIM5-209ENST00000506632 C4orf19Q8IY42 314 aa10.18□□□□□ -0.78
PDLIM5-209ENST00000506632 SLFN12Q8IYM2 578 aa10.18□□□□□ -0.78
PDLIM5-209ENST00000506632 ADAMTS19Q8TE59 1207 aa10.18□□□□□ -0.78
PDLIM5-209ENST00000506632 ZSCAN31Q96LW9 406 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-209ENST00000506632 SH2D3AQ9BRG2 576 aa10.18□□□□□ -0.78
PDLIM5-209ENST00000506632 LMAN2LQ9H0V9 348 aa10.18□□□□□ -0.78
PDLIM5-209ENST00000506632 ELAC1Q9H777 363 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-209ENST00000506632 CYP26B1Q9NR63 512 aa10.18□□□□□ -0.78
PDLIM5-209ENST00000506632 TMEM161AQ9NX61 479 aa10.18□□□□□ -0.78
PDLIM5-209ENST00000506632 PPME1Q9Y570 386 aa10.18□□□□□ -0.78
PDLIM5-209ENST00000506632 DKC1O60832 514 aaKnown RBP eCLIP10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 FOSBP53539 338 aa10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 NPEPPSP55786 919 aa10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 CDC42EP1Q00587 391 aa10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 CAMK1Q14012 370 aa10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 NAALADL2Q58DX5 795 aa10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 TCEAL5Q5H9L2 206 aa10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 FAM102BQ5T8I3 360 aa10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 PLA2G4FQ68DD2 849 aa10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 ZNF410Q86VK4 478 aa10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 CCDC83Q8IWF9 413 aa10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 ZNF579Q8NAF0 562 aaKnown RBP10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 ZNF668Q96K58 619 aaPredicted RBP10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 MTMR9Q96QG7 549 aa10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 UHRF1Q96T88 793 aaPredicted RBP10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 LXNQ9BS40 222 aa10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 NSUN3Q9H649 340 aaKnown RBP10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 DHX33Q9H6R0 707 aaKnown RBP10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 UBE2ZQ9H832 354 aaPredicted RBP10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 SH2B1Q9NRF2 756 aaPredicted RBP10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 RNF19AQ9NV58 838 aa10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 RGL1Q9NZL6 768 aa10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 LRFN2Q9ULH4 789 aa10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 PLAGL2Q9UPG8 496 aa10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 PCDHB7Q9Y5E2 793 aa10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 ARID2Q68CP9 1835 aa10.17□□□□□ -0.78
PDLIM5-209ENST00000506632 TCF20Q9UGU0 1960 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 A0A087WZ62 844 aa10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 TNFRSF10AO00220 468 aa10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 SLITRK3O94933 977 aa10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 LYPLA2O95372 231 aa10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 BAG4O95429 457 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 ITGB1P05556 798 aa10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 DNM2P50570 870 aa10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 HMGN5P82970 282 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 TRIM29Q14134 588 aa10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 PAN2Q504Q3 1202 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 NCAPH2Q6IBW4 605 aa10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 ZNF598Q86UK7 904 aaKnown RBP10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 FBXO18Q8NFZ0 1043 aa10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 SPPL3Q8TCT6 385 aa10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 NEK9Q8TD19 979 aa10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 NLRP7Q8WX94 980 aa10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 DYDC2Q96IM9 177 aa10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 HSD17B14Q9BPX1 270 aa10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 JPH2Q9BR39 696 aaPredicted RBP10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 FDXACB1Q9BRP7 624 aaPredicted RBP10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 TRAIPQ9BWF2 469 aa10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 GCOM2Q9BZD3 368 aaPredicted RBP10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 ZSWIM4Q9H7M6 989 aa10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 SUCLA2Q9P2R7 463 aaPredicted RBP10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 PCDHA12Q9UN75 941 aa10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 STK24Q9Y6E0 443 aa10.16□□□□□ -0.78
PDLIM5-209ENST00000506632 A0A0U1RQF3 1178 aa10.15□□□□□ -0.78
PDLIM5-209ENST00000506632 TBKBP1A7MCY6 615 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms