RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 DGKIO75912 1065 aa17.42■□□□□ 0.38
CLDND1-211ENST00000506575 ZSCAN20P17040 1043 aaPredicted RBP17.42■□□□□ 0.38
CLDND1-211ENST00000506575 RFC5P40937 340 aa17.42■□□□□ 0.38
CLDND1-211ENST00000506575 SARSP49591 514 aaKnown RBP17.42■□□□□ 0.38
CLDND1-211ENST00000506575 NPEPPSP55786 919 aa17.42■□□□□ 0.38
CLDND1-211ENST00000506575 DRP2Q13474 957 aa17.42■□□□□ 0.38
CLDND1-211ENST00000506575 SKIV2LQ15477 1246 aaKnown RBP17.42■□□□□ 0.38
CLDND1-211ENST00000506575 ZNF174Q15697 407 aa17.42■□□□□ 0.38
CLDND1-211ENST00000506575 EPC2Q52LR7 807 aa17.42■□□□□ 0.38
CLDND1-211ENST00000506575 XKR9Q5GH70 373 aa17.42■□□□□ 0.38
CLDND1-211ENST00000506575 TTC38Q5R3I4 469 aa17.42■□□□□ 0.38
CLDND1-211ENST00000506575 SLC24A5Q71RS6 500 aa17.42■□□□□ 0.38
CLDND1-211ENST00000506575 RHPN2Q8IUC4 686 aa17.42■□□□□ 0.38
CLDND1-211ENST00000506575 TMEM192Q8IY95 271 aa17.42■□□□□ 0.38
CLDND1-211ENST00000506575 CCDC43Q96MW1 224 aaKnown RBP17.42■□□□□ 0.38
CLDND1-211ENST00000506575 MTMR9Q96QG7 549 aa17.42■□□□□ 0.38
CLDND1-211ENST00000506575 GCOM2Q9BZD3 368 aaPredicted RBP17.42■□□□□ 0.38
CLDND1-211ENST00000506575 RGS18Q9NS28 235 aa17.42■□□□□ 0.38
CLDND1-211ENST00000506575 LMCD1Q9NZU5 365 aa17.42■□□□□ 0.38
CLDND1-211ENST00000506575 RWDD3Q9Y3V2 267 aa17.42■□□□□ 0.38
CLDND1-211ENST00000506575 PCDHB7Q9Y5E2 793 aa17.42■□□□□ 0.38
CLDND1-211ENST00000506575 LPXNO60711 386 aa17.41■□□□□ 0.38
CLDND1-211ENST00000506575 SLITRK3O94933 977 aa17.41■□□□□ 0.38
CLDND1-211ENST00000506575 CD2BP2O95400 341 aaKnown RBP17.41■□□□□ 0.38
CLDND1-211ENST00000506575 DARSP14868 501 aaKnown RBP17.41■□□□□ 0.38
CLDND1-211ENST00000506575 CTNNB1P35222 781 aa17.41■□□□□ 0.38
CLDND1-211ENST00000506575 TRAPPC10P48553 1259 aa17.41■□□□□ 0.38
CLDND1-211ENST00000506575 ZNF689Q96CS4 500 aaPredicted RBP17.41■□□□□ 0.38
CLDND1-211ENST00000506575 INO80BQ9C086 356 aaPredicted RBP17.41■□□□□ 0.38
CLDND1-211ENST00000506575 TMEM60Q9H2L4 133 aa17.41■□□□□ 0.38
CLDND1-211ENST00000506575 ARID2Q68CP9 1835 aa17.41■□□□□ 0.38
CLDND1-211ENST00000506575 OR52Z1P0C646 297 aa17.4■□□□□ 0.38
CLDND1-211ENST00000506575 U2AF2P26368 475 aaKnown RBP eCLIP17.4■□□□□ 0.381e-6■□□□□ 11.2
CLDND1-211ENST00000506575 GJB2P29033 226 aa17.4■□□□□ 0.38
CLDND1-211ENST00000506575 GPM6BQ13491 265 aa17.4■□□□□ 0.38
CLDND1-211ENST00000506575 MCTP1Q6DN14 999 aa17.4■□□□□ 0.38
CLDND1-211ENST00000506575 ZNF410Q86VK4 478 aa17.4■□□□□ 0.38
CLDND1-211ENST00000506575 CMTR2Q8IYT2 770 aaKnown RBP17.4■□□□□ 0.38
CLDND1-211ENST00000506575 CRIPAKQ8N1N5 446 aa17.4■□□□□ 0.38
CLDND1-211ENST00000506575 ZNF579Q8NAF0 562 aaKnown RBP17.4■□□□□ 0.38
CLDND1-211ENST00000506575 HSD17B14Q9BPX1 270 aa17.4■□□□□ 0.38
CLDND1-211ENST00000506575 RC3H2Q9HBD1 1191 aaKnown RBP17.4■□□□□ 0.38
CLDND1-211ENST00000506575 PRDM6Q9NQX0 595 aa17.4■□□□□ 0.38
CLDND1-211ENST00000506575 BMP2KQ9NSY1 1161 aaPredicted RBP17.4■□□□□ 0.38
CLDND1-211ENST00000506575 THEGQ9P2T0 379 aa17.4■□□□□ 0.38
CLDND1-211ENST00000506575 SMC3Q9UQE7 1217 aa17.4■□□□□ 0.38
CLDND1-211ENST00000506575 A0A087WZ62 844 aa17.39■□□□□ 0.37
CLDND1-211ENST00000506575 POTEMA6NI47 508 aa17.39■□□□□ 0.37
CLDND1-211ENST00000506575 C9IYK1 514 aa17.39■□□□□ 0.37
CLDND1-211ENST00000506575 H3BNC9 293 aa17.39■□□□□ 0.37
CLDND1-211ENST00000506575 H3BQV1 296 aa17.39■□□□□ 0.37
CLDND1-211ENST00000506575 GAS2O43903 313 aaKnown RBP17.39■□□□□ 0.37
CLDND1-211ENST00000506575 LYPLA2O95372 231 aa17.39■□□□□ 0.37
CLDND1-211ENST00000506575 SFPQP23246 707 aaKnown RBP eCLIP17.39■□□□□ 0.37
CLDND1-211ENST00000506575 TECP42680 631 aa17.39■□□□□ 0.37
CLDND1-211ENST00000506575 EMC2Q15006 297 aa17.39■□□□□ 0.37
CLDND1-211ENST00000506575 PTPROQ16827 1216 aa17.39■□□□□ 0.37
CLDND1-211ENST00000506575 PAN2Q504Q3 1202 aaKnown RBP17.39■□□□□ 0.37
CLDND1-211ENST00000506575 ERMNQ8TAM6 284 aa17.39■□□□□ 0.37
CLDND1-211ENST00000506575 TCP11Q8WWU5 503 aa17.39■□□□□ 0.37
CLDND1-211ENST00000506575 PSPC1Q8WXF1 523 aaKnown RBP17.39■□□□□ 0.37
CLDND1-211ENST00000506575 NLRP4Q96MN2 994 aa17.39■□□□□ 0.37
CLDND1-211ENST00000506575 FDXACB1Q9BRP7 624 aaPredicted RBP17.39■□□□□ 0.37
CLDND1-211ENST00000506575 BACH2Q9BYV9 841 aa17.39■□□□□ 0.37
CLDND1-211ENST00000506575 DHX33Q9H6R0 707 aaKnown RBP17.39■□□□□ 0.37
CLDND1-211ENST00000506575 ATP6V0A4Q9HBG4 840 aa17.39■□□□□ 0.37
CLDND1-211ENST00000506575 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.39■□□□□ 0.37
CLDND1-211ENST00000506575 COL4A3BPQ9Y5P4 624 aa17.39■□□□□ 0.37
CLDND1-211ENST00000506575 ZBTB39O15060 712 aa17.38■□□□□ 0.37
CLDND1-211ENST00000506575 CSDE1O75534 798 aaKnown RBP17.38■□□□□ 0.37
CLDND1-211ENST00000506575 RB1P06400 928 aa17.38■□□□□ 0.37
CLDND1-211ENST00000506575 FGFR4P22455 802 aa17.38■□□□□ 0.37
CLDND1-211ENST00000506575 BMPR1AP36894 532 aa17.38■□□□□ 0.37
CLDND1-211ENST00000506575 DSC3Q14574 896 aa17.38■□□□□ 0.37
CLDND1-211ENST00000506575 CLP1Q92989 425 aaKnown RBP17.38■□□□□ 0.37
CLDND1-211ENST00000506575 TMEM143Q96AN5 459 aa17.38■□□□□ 0.37
CLDND1-211ENST00000506575 MTRQ99707 1265 aa17.38■□□□□ 0.37
CLDND1-211ENST00000506575 C11orf84Q9BUA3 381 aaPredicted RBP17.38■□□□□ 0.37
CLDND1-211ENST00000506575 ANKEF1Q9NU02 776 aa17.38■□□□□ 0.37
CLDND1-211ENST00000506575 TMEM161AQ9NX61 479 aa17.38■□□□□ 0.37
CLDND1-211ENST00000506575 REV3LO60673 3130 aa17.37■□□□□ 0.37
CLDND1-211ENST00000506575 NBR1Q14596 966 aa17.37■□□□□ 0.37
CLDND1-211ENST00000506575 KSR1Q8IVT5 923 aa17.37■□□□□ 0.37
CLDND1-211ENST00000506575 ATXN2LQ8WWM7 1075 aaKnown RBP17.37■□□□□ 0.37
CLDND1-211ENST00000506575 PRPF31Q8WWY3 499 aaKnown RBP17.37■□□□□ 0.37
CLDND1-211ENST00000506575 MRPL38Q96DV4 380 aaKnown RBP17.37■□□□□ 0.37
CLDND1-211ENST00000506575 ELAC1Q9H777 363 aaKnown RBP17.37■□□□□ 0.37
CLDND1-211ENST00000506575 TUFT1Q9NNX1 390 aa17.37■□□□□ 0.37
CLDND1-211ENST00000506575 DACT1Q9NYF0 836 aa17.37■□□□□ 0.37
CLDND1-211ENST00000506575 MRPL42Q9Y6G3 142 aaKnown RBP17.37■□□□□ 0.37
CLDND1-211ENST00000506575 FNDC1Q4ZHG4 1894 aaPredicted RBP17.37■□□□□ 0.37
CLDND1-211ENST00000506575 KIAA1671Q9BY89 1806 aa17.36■□□□□ 0.37
CLDND1-211ENST00000506575 TBKBP1A7MCY6 615 aa17.36■□□□□ 0.37
CLDND1-211ENST00000506575 C5orf67F2Z3F1 127 aa17.36■□□□□ 0.37
CLDND1-211ENST00000506575 DLL1O00548 723 aa17.36■□□□□ 0.37
CLDND1-211ENST00000506575 ASAP2O43150 1006 aa17.36■□□□□ 0.37
CLDND1-211ENST00000506575 HOXA2O43364 376 aa17.36■□□□□ 0.37
CLDND1-211ENST00000506575 SRGAP2CP0DJJ0 459 aa17.36■□□□□ 0.37
CLDND1-211ENST00000506575 GATMP50440 423 aa17.36■□□□□ 0.37
CLDND1-211ENST00000506575 FAM189BP81408 668 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms