RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 KRTAP21-3Q3LHN1 58 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 SLFNL1Q499Z3 407 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 TTC39AQ5SRH9 613 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 CELF3Q5SZQ8 465 aaKnown RBP3.98□□□□□ -1.77
TCOF1-208ENST00000506063 MARCH8Q5T0T0 291 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 SPOUT1Q5T280 376 aaKnown RBP3.98□□□□□ -1.77
TCOF1-208ENST00000506063 GORABQ5T7V8 394 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 DAB2IPQ5VWQ8 1189 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 CTR9Q6PD62 1173 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 TMED8Q6PL24 325 aaPredicted RBP3.98□□□□□ -1.77
TCOF1-208ENST00000506063 POTEHQ6S545 545 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 RNF207Q6ZRF8 634 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 FAM160B2Q86V87 743 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 WDR5BQ86VZ2 330 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 TRIM50Q86XT4 487 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 SCUBE3Q8IX30 993 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 VPS52Q8N1B4 723 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 ZFP91Q96JP5 570 aaPredicted RBP3.98□□□□□ -1.77
TCOF1-208ENST00000506063 ZC3H10Q96K80 434 aaKnown RBP3.98□□□□□ -1.77
TCOF1-208ENST00000506063 IER2Q9BTL4 223 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 FTHL17Q9BXU8 183 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 VPS45Q9NRW7 570 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 MTMR4Q9NYA4 1195 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 SPG21Q9NZD8 308 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 HSPBP1Q9NZL4 362 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 ANKMY1Q9P2S6 941 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 DBNLQ9UJU6 430 aaKnown RBP3.98□□□□□ -1.77
TCOF1-208ENST00000506063 SQORQ9Y6N5 450 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 NBASA2RRP1 2371 aa3.98□□□□□ -1.77
TCOF1-208ENST00000506063 CELSR1Q9NYQ6 3014 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 ADGRG4Q8IZF6 3080 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 CCDC195A0A1B0GUA6 201 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 INPPL1O15357 1258 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 NCAM2O15394 837 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 SORBS3O60504 671 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 CHGBP05060 677 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 CNPP09543 421 aaKnown RBP3.97□□□□□ -1.77
TCOF1-208ENST00000506063 CHRNB1P11230 501 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 GP1BBP13224 206 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 UBA1P22314 1058 aaKnown RBP3.97□□□□□ -1.77
TCOF1-208ENST00000506063 MCCP23508 829 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 ITPKBP27987 946 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 CXCL12P48061 93 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 CSRP3P50461 194 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 SIM1P81133 766 aaPredicted RBP3.97□□□□□ -1.77
TCOF1-208ENST00000506063 MRPS6P82932 125 aaKnown RBP3.97□□□□□ -1.77
TCOF1-208ENST00000506063 ARHGAP4P98171 946 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 KRT17Q04695 432 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 TNNI3KQ59H18 835 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 SYDE2Q5VT97 1194 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 HEATR6Q6AI08 1181 aaKnown RBP3.97□□□□□ -1.77
TCOF1-208ENST00000506063 TAF2Q6P1X5 1199 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 CYP26C1Q6V0L0 522 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 ZNF852Q6ZMS4 543 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 KCTD1Q719H9 257 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 TMC8Q8IU68 726 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 MRPL50Q8N5N7 158 aaKnown RBP3.97□□□□□ -1.77
TCOF1-208ENST00000506063 CHURC1Q8WUH1 139 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 DNAJB3Q8WWF6 145 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 GAB3Q8WWW8 586 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 TBC1D5Q92609 795 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 STAMQ92783 540 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 GPKOWQ92917 476 aaPredicted RBP eCLIP3.97□□□□□ -1.77
TCOF1-208ENST00000506063 CHMP4CQ96CF2 233 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 ZBTB10Q96DT7 871 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 SPATA33Q96N06 139 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 ZNF558Q96NG5 402 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 TAAR1Q96RJ0 339 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 ARMT1Q9H993 441 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 HEBP1Q9NRV9 189 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 RGS18Q9NS28 235 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 ATP8A2Q9NTI2 1148 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.97□□□□□ -1.77
TCOF1-208ENST00000506063 PCDHB7Q9Y5E2 793 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 FPGT-TNNI3KV9GXZ4 949 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 NF1P21359 2839 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 CABIN1Q9Y6J0 2220 aa3.97□□□□□ -1.77
TCOF1-208ENST00000506063 ZNF532Q9HCE3 1301 aa3.96□□□□□ -1.77
TCOF1-208ENST00000506063 CRYBG3Q68DQ2 2970 aa3.96□□□□□ -1.77
TCOF1-208ENST00000506063 MYLKQ15746 1914 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 PLXND1Q9Y4D7 1925 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 BCLAF3A2AJT9 711 aaKnown RBP3.96□□□□□ -1.78
TCOF1-208ENST00000506063 UPK3BL1B0FP48 263 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 PATE3B3GLJ2 98 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 B8ZZF3 427 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 NT5C1B-RDH14C9J2C7 533 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 UPK3BL2E5RIL1 263 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 H0Y626 953 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 NRG2O14511 850 aaPredicted RBP3.96□□□□□ -1.78
TCOF1-208ENST00000506063 C2CD2LO14523 706 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 B4GALT3O60512 393 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 TRIM16O95361 564 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 GGPS1O95749 300 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 TTLL1O95922 423 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 UBTFL1P0CB47 393 aaPredicted RBP3.96□□□□□ -1.78
TCOF1-208ENST00000506063 POLGP54098 1239 aaPredicted RBP3.96□□□□□ -1.78
TCOF1-208ENST00000506063 PFKPQ01813 784 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 SEMA3BQ13214 749 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 PTGDRQ13258 359 aa3.96□□□□□ -1.78
TCOF1-208ENST00000506063 DSC3Q14574 896 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms