RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 EIF3DO15371 548 aaKnown RBP eCLIP8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 TTI1O43156 1089 aa8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 DAPK3O43293 454 aa8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 BUB1BO60566 1050 aaPredicted RBP8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 LRRN2O75325 713 aa8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 PSMD10O75832 226 aa8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 FGGP02679 453 aa8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 POLR2MP0CAP2 368 aa8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 ECHS1P30084 290 aa8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 CTNNA1P35221 906 aaKnown RBP8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 FLT3P36888 993 aa8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 CUL1Q13616 776 aa8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 AOC3Q16853 763 aa8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 BTNL9Q6UXG8 535 aa8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 TRMT1LQ7Z2T5 733 aaKnown RBP8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 MICALL1Q8N3F8 863 aa8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 BANK1Q8NDB2 785 aa8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 UBLCP1Q8WVY7 318 aaPredicted RBP8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 HOOK2Q96ED9 719 aa8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 ZNF577Q9BSK1 485 aa8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 STK33Q9BYT3 514 aa8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 CELF4Q9BZC1 486 aaKnown RBP8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 TRIM31Q9BZY9 425 aa8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 NEUROG2Q9H2A3 272 aa8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 QTRT2Q9H974 415 aaKnown RBP8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 TUFT1Q9NNX1 390 aa8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 PKD2L1Q9P0L9 805 aa8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 SUCLA2Q9P2R7 463 aaPredicted RBP8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 AMFRQ9UKV5 643 aa8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 TRPC5Q9UL62 973 aaPredicted RBP8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 PPP1R9AQ9ULJ8 1098 aa8.29□□□□□ -1.08
PPARGC1A-204ENST00000506055 ATAD5Q96QE3 1844 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 MYZAPP0CAP1 466 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 LMNB1P20700 586 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 HSPA9P38646 679 aaKnown RBP8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 LIG3P49916 1009 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 HDLBPQ00341 1268 aaKnown RBP8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 KDM7AQ6ZMT4 941 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 SLFN11Q7Z7L1 901 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 PACS2Q86VP3 889 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 EFCAB13Q8IY85 973 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 SLC30A5Q8TAD4 765 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 CTNNBL1Q8WYA6 563 aaPredicted RBP8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 CALR3Q96L12 384 aaKnown RBP8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 DPH5Q9H2P9 285 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 NENFQ9UMX5 172 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 STXBP5LQ9Y2K9 1186 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 SRCAPQ6ZRS2 3230 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 A0A0A6YYK5 440 aaPredicted RBP8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 CLRN2A0PK11 232 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 A6NNZ2 444 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 EXOC3O60645 756 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 ZBTB48P10074 688 aaPredicted RBP8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 ARP10275 920 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 LSP1P33241 339 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 COPB2P35606 906 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 PRELPP51888 382 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 SEC24CP53992 1094 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 PPP2R5CQ13362 524 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 TUBB8Q3ZCM7 444 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 TTC31Q49AM3 519 aaPredicted RBP8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 CEP55Q53EZ4 464 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 ODF2Q5BJF6 829 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 CD302Q8IX05 232 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 HES6Q96HZ4 224 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 NACC1Q96RE7 527 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 FAM107BQ9H098 131 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 INTS2Q9H0H0 1204 aaKnown RBP8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 THAP2Q9H0W7 228 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 UNC45AQ9H3U1 944 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 PCIF1Q9H4Z3 704 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 AGPAT3Q9NRZ7 376 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 TAS2R14Q9NYV8 317 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 NR2E1Q9Y466 385 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 SIPA1L1O43166 1804 aa8.28□□□□□ -1.08
PPARGC1A-204ENST00000506055 ANKRD31Q8N7Z5 1873 aa8.27□□□□□ -1.08
PPARGC1A-204ENST00000506055 IGSF9BQ9UPX0 1349 aa8.27□□□□□ -1.09
PPARGC1A-204ENST00000506055 SMCHD1A6NHR9 2005 aa8.27□□□□□ -1.09
PPARGC1A-204ENST00000506055 HMGB1P1B2RPK0 211 aaPredicted RBP8.27□□□□□ -1.09
PPARGC1A-204ENST00000506055 CCDC188H7C350 402 aa8.27□□□□□ -1.09
PPARGC1A-204ENST00000506055 FOXN3O00409 490 aaPredicted RBP8.27□□□□□ -1.09
PPARGC1A-204ENST00000506055 TNFAIP3P21580 790 aa8.27□□□□□ -1.09
PPARGC1A-204ENST00000506055 ANXA13P27216 316 aa8.27□□□□□ -1.09
PPARGC1A-204ENST00000506055 ITGB3BPQ13352 177 aaPredicted RBP8.27□□□□□ -1.09
PPARGC1A-204ENST00000506055 ZNF211Q13398 564 aaPredicted RBP8.27□□□□□ -1.09
PPARGC1A-204ENST00000506055 UAP1Q16222 522 aaPredicted RBP8.27□□□□□ -1.09
PPARGC1A-204ENST00000506055 CC2D2BQ6DHV5 1058 aa8.27□□□□□ -1.09
PPARGC1A-204ENST00000506055 PHLDB3Q6NSJ2 640 aa8.27□□□□□ -1.09
PPARGC1A-204ENST00000506055 KRT27Q7Z3Y8 459 aa8.27□□□□□ -1.09
PPARGC1A-204ENST00000506055 PALB2Q86YC2 1186 aa8.27□□□□□ -1.09
PPARGC1A-204ENST00000506055 RASGEF1CQ8N431 466 aa8.27□□□□□ -1.09
PPARGC1A-204ENST00000506055 CCDC26Q8TAB7 109 aa8.27□□□□□ -1.09
PPARGC1A-204ENST00000506055 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.27□□□□□ -1.09
PPARGC1A-204ENST00000506055 SLC5A5Q92911 643 aa8.27□□□□□ -1.09
PPARGC1A-204ENST00000506055 LRRC45Q96CN5 670 aa8.27□□□□□ -1.09
PPARGC1A-204ENST00000506055 FIZ1Q96SL8 496 aa8.27□□□□□ -1.09
PPARGC1A-204ENST00000506055 GPR88Q9GZN0 384 aa8.27□□□□□ -1.09
PPARGC1A-204ENST00000506055 EPN3Q9H201 632 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms