RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 NOL10Q9BSC4 688 aaKnown RBP5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 MENTQ9BUN1 341 aa5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 ASPSCR1Q9BZE9 553 aa5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 KATNBL1Q9H079 304 aa5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 BARX1Q9HBU1 254 aaPredicted RBP5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 SAE1Q9UBE0 346 aaPredicted RBP5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 EDARQ9UNE0 448 aa5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 NUMBLQ9Y6R0 609 aa5.51□□□□□ -1.53
TOPBP1-204ENST00000505804 WASHC2AQ641Q2 1341 aa5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 MROH6A6NGR9 719 aa5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 C9orf118A6NHY6 69 aa5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 TRIM13O60858 407 aa5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 CUTAO60888 179 aa5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 H2AFYO75367 372 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 MAFO75444 373 aaPredicted RBP5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 PDGFRBP09619 1106 aa5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 ZNF888P0CJ79 500 aaPredicted RBP5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 BMP7P18075 431 aa5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 ENPP1P22413 925 aa5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 IARSP41252 1262 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 TRIM25Q14258 630 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 INAVAQ3KP66 663 aa5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 NT5DC1Q5TFE4 455 aa5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 PGM2L1Q6PCE3 622 aa5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 LCNL1Q6ZST4 164 aa5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 LARP4Q71RC2 724 aaKnown RBP eCLIP5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 GPR155Q7Z3F1 870 aa5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 KLHL36Q8N4N3 616 aa5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 MARCH10Q8NA82 808 aaPredicted RBP5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 AJUBAQ96IF1 538 aa5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 SMAD5Q99717 465 aaKnown RBP5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 CARD11Q9BXL7 1154 aa5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 PITHD1Q9GZP4 211 aaPredicted RBP5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 ADAM29Q9UKF5 820 aa5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 PTPN22Q9Y2R2 807 aa5.5□□□□□ -1.53
TOPBP1-204ENST00000505804 A0A0A6YYK5 440 aaPredicted RBP5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 MAFGO15525 162 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 NOBOXO60393 691 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 MT-CO1P00395 513 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 HMGCRP04035 888 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 MYBL2P10244 700 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 CSF2RBP32927 897 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 ETV4P43268 484 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 RRADP55042 308 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 LGALS4P56470 323 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 EXOSC10Q01780 885 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 KIAA2012Q0VF49 1180 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 TRIM68Q6AZZ1 485 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 BMP8AQ7Z5Y6 402 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 IFNL2Q8IZJ0 200 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 OR5AN1Q8NGI8 311 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 GAB3Q8WWW8 586 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 MBD6Q96DN6 1003 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 DYDC2Q96IM9 177 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 PUS7Q96PZ0 661 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 ORAI2Q96SN7 254 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 SOX7Q9BT81 388 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 KRTAP4-8Q9BYQ9 185 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 QRSL1Q9H0R6 528 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 WNT8AQ9H1J5 351 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 KCTD10Q9H3F6 313 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 LUC7LQ9NQ29 371 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 TYW1Q9NV66 732 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 PRSS50Q9UI38 385 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 DNAI1Q9UI46 699 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 SYNPO2Q9UMS6 1093 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 PCDHB6Q9Y5E3 794 aa5.49□□□□□ -1.53
TOPBP1-204ENST00000505804 TNKSO95271 1327 aa5.48□□□□□ -1.53
TOPBP1-204ENST00000505804 B4GALT4O60513 344 aa5.48□□□□□ -1.53
TOPBP1-204ENST00000505804 CELA3BP08861 270 aa5.48□□□□□ -1.53
TOPBP1-204ENST00000505804 GJA9P57773 515 aa5.48□□□□□ -1.53
TOPBP1-204ENST00000505804 USP10Q14694 798 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-204ENST00000505804 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.48□□□□□ -1.53
TOPBP1-204ENST00000505804 ABCB5Q2M3G0 1257 aa5.48□□□□□ -1.53
TOPBP1-204ENST00000505804 TOR2AQ5JU69 321 aa5.48□□□□□ -1.53
TOPBP1-204ENST00000505804 SIAH1Q8IUQ4 282 aa5.48□□□□□ -1.53
TOPBP1-204ENST00000505804 SLC41A1Q8IVJ1 513 aa5.48□□□□□ -1.53
TOPBP1-204ENST00000505804 KBTBD2Q8IY47 623 aa5.48□□□□□ -1.53
TOPBP1-204ENST00000505804 RTKN2Q8IZC4 609 aa5.48□□□□□ -1.53
TOPBP1-204ENST00000505804 ZDHHC14Q8IZN3 488 aa5.48□□□□□ -1.53
TOPBP1-204ENST00000505804 C1orf162Q8NEQ5 155 aaPredicted RBP5.48□□□□□ -1.53
TOPBP1-204ENST00000505804 FEZF2Q8TBJ5 459 aa5.48□□□□□ -1.53
TOPBP1-204ENST00000505804 FAXDC2Q96IV6 333 aa5.48□□□□□ -1.53
TOPBP1-204ENST00000505804 HIST1H2AHQ96KK5 128 aa5.48□□□□□ -1.53
TOPBP1-204ENST00000505804 HIST1H2AJQ99878 128 aa5.48□□□□□ -1.53
TOPBP1-204ENST00000505804 GOLGA2P5Q9HBQ8 144 aa5.48□□□□□ -1.53
TOPBP1-204ENST00000505804 DNAJC28Q9NX36 388 aa5.48□□□□□ -1.53
TOPBP1-204ENST00000505804 HNRNPLP14866 589 aaKnown RBP eCLIP5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 CDK17Q00537 523 aa5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 SRSF2Q01130 221 aaKnown RBP5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 PPARAQ07869 468 aa5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 ADAM15Q13444 863 aa5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 PCOLCEQ15113 449 aa5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 PCBP2Q15366 365 aaKnown RBP eCLIP5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 CLUL1Q15846 466 aa5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 PTPN21Q16825 1174 aa5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 GAREM2Q75VX8 874 aa5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 FAM124AQ86V42 546 aa5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 REXO1L1PQ8IX06 675 aa5.47□□□□□ -1.53
TOPBP1-204ENST00000505804 SP8Q8IXZ3 490 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms