RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 ORC4O43929 436 aa8.15□□□□□ -1.1
VCAN-206ENST00000505615 RANBP6O60518 1105 aaKnown RBP8.15□□□□□ -1.1
VCAN-206ENST00000505615 RAB11FIP3O75154 756 aa8.15□□□□□ -1.1
VCAN-206ENST00000505615 HOXB8P17481 243 aaPredicted RBP8.15□□□□□ -1.1
VCAN-206ENST00000505615 CBLBQ13191 982 aa8.15□□□□□ -1.1
VCAN-206ENST00000505615 COL9A2Q14055 689 aaPredicted RBP8.15□□□□□ -1.1
VCAN-206ENST00000505615 CDC37Q16543 378 aaPredicted RBP8.15□□□□□ -1.1
VCAN-206ENST00000505615 PPP1R26Q5T8A7 1209 aaPredicted RBP8.15□□□□□ -1.1
VCAN-206ENST00000505615 ARHGEF16Q5VV41 709 aa8.15□□□□□ -1.1
VCAN-206ENST00000505615 TSHZ1Q6ZSZ6 1077 aa8.15□□□□□ -1.1
VCAN-206ENST00000505615 ZDHHC14Q8IZN3 488 aa8.15□□□□□ -1.1
VCAN-206ENST00000505615 SEC62Q99442 399 aaKnown RBP8.15□□□□□ -1.1
VCAN-206ENST00000505615 PDCD2LQ9BRP1 358 aa8.15□□□□□ -1.1
VCAN-206ENST00000505615 NACAP1Q9BZK3 213 aa8.15□□□□□ -1.1
VCAN-206ENST00000505615 AGO3Q9H9G7 860 aaKnown RBP8.15□□□□□ -1.1
VCAN-206ENST00000505615 TELO2Q9Y4R8 837 aa8.15□□□□□ -1.1
VCAN-206ENST00000505615 PATJQ8NI35 1801 aa8.15□□□□□ -1.11
VCAN-206ENST00000505615 FLNBO75369 2602 aaKnown RBP8.15□□□□□ -1.11
VCAN-206ENST00000505615 ASPMQ8IZT6 3477 aa8.14□□□□□ -1.11
VCAN-206ENST00000505615 HIDE1A8MVS5 230 aa8.14□□□□□ -1.11
VCAN-206ENST00000505615 FGF18O76093 207 aa8.14□□□□□ -1.11
VCAN-206ENST00000505615 ZFYP08048 801 aaPredicted RBP8.14□□□□□ -1.11
VCAN-206ENST00000505615 FGRP09769 529 aa8.14□□□□□ -1.11
VCAN-206ENST00000505615 HSD17B4P51659 736 aa8.14□□□□□ -1.11
VCAN-206ENST00000505615 ARHGAP4P98171 946 aa8.14□□□□□ -1.11
VCAN-206ENST00000505615 GHRHRQ02643 423 aa8.14□□□□□ -1.11
VCAN-206ENST00000505615 APOBRQ0VD83 1088 aa8.14□□□□□ -1.11
VCAN-206ENST00000505615 PLPP4Q5VZY2 271 aa8.14□□□□□ -1.11
VCAN-206ENST00000505615 LLGL2Q6P1M3 1020 aa8.14□□□□□ -1.11
VCAN-206ENST00000505615 SUMF1Q8NBK3 374 aa8.14□□□□□ -1.11
VCAN-206ENST00000505615 MICAL1Q8TDZ2 1067 aa8.14□□□□□ -1.11
VCAN-206ENST00000505615 RUBCNQ92622 972 aa8.14□□□□□ -1.11
VCAN-206ENST00000505615 RTP3Q9BQQ7 232 aa8.14□□□□□ -1.11
VCAN-206ENST00000505615 ERVK-5Q9HDB9 667 aa8.14□□□□□ -1.11
VCAN-206ENST00000505615 ANAPC4Q9UJX5 808 aa8.14□□□□□ -1.11
VCAN-206ENST00000505615 WEE2P0C1S8 567 aa8.13□□□□□ -1.11
VCAN-206ENST00000505615 GOLGA8HP0CJ92 632 aa8.13□□□□□ -1.11
VCAN-206ENST00000505615 SRGAP2BP0DMP2 458 aa8.13□□□□□ -1.11
VCAN-206ENST00000505615 GNAT1P11488 350 aa8.13□□□□□ -1.11
VCAN-206ENST00000505615 SCG2P13521 617 aa8.13□□□□□ -1.11
VCAN-206ENST00000505615 CD52P31358 61 aa8.13□□□□□ -1.11
VCAN-206ENST00000505615 ATXN1P54253 815 aaKnown RBP8.13□□□□□ -1.11
VCAN-206ENST00000505615 SEMA3FQ13275 785 aa8.13□□□□□ -1.11
VCAN-206ENST00000505615 TSHZ3Q63HK5 1081 aa8.13□□□□□ -1.11
VCAN-206ENST00000505615 PDE12Q6L8Q7 609 aaKnown RBP8.13□□□□□ -1.11
VCAN-206ENST00000505615 KCNV1Q6PIU1 500 aa8.13□□□□□ -1.11
VCAN-206ENST00000505615 VSIG10LQ86VR7 867 aa8.13□□□□□ -1.11
VCAN-206ENST00000505615 TDRD5Q8NAT2 981 aaKnown RBP8.13□□□□□ -1.11
VCAN-206ENST00000505615 COLGALT1Q8NBJ5 622 aa8.13□□□□□ -1.11
VCAN-206ENST00000505615 FEZF2Q8TBJ5 459 aa8.13□□□□□ -1.11
VCAN-206ENST00000505615 TSC1Q92574 1164 aa8.13□□□□□ -1.11
VCAN-206ENST00000505615 NECTIN4Q96NY8 510 aa8.13□□□□□ -1.11
VCAN-206ENST00000505615 GPR20Q99678 358 aa8.13□□□□□ -1.11
VCAN-206ENST00000505615 UBA5Q9GZZ9 404 aa8.13□□□□□ -1.11
VCAN-206ENST00000505615 ADAM7Q9H2U9 754 aa8.13□□□□□ -1.11
VCAN-206ENST00000505615 TCP11L1Q9NUJ3 509 aa8.13□□□□□ -1.11
VCAN-206ENST00000505615 CDY2AQ9Y6F7 541 aa8.13□□□□□ -1.11
VCAN-206ENST00000505615 RALGAPA1Q6GYQ0 2036 aa8.13□□□□□ -1.11
VCAN-206ENST00000505615 DOCK6Q96HP0 2047 aa8.13□□□□□ -1.11
VCAN-206ENST00000505615 NRCAMQ92823 1304 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 SPEGQ15772 3267 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 MBLAC1A4D2B0 266 aaPredicted RBP8.12□□□□□ -1.11
VCAN-206ENST00000505615 FIGNL2A6NMB9 653 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 SMARCA5O60264 1052 aaPredicted RBP8.12□□□□□ -1.11
VCAN-206ENST00000505615 ADRB1P08588 477 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 HMGB1P09429 215 aaKnown RBP8.12□□□□□ -1.11
VCAN-206ENST00000505615 STAG3L1P0CL83 205 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 TGFB3P10600 412 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 HSPD1P10809 573 aaKnown RBP8.12□□□□□ -1.11
VCAN-206ENST00000505615 MYCLP12524 364 aaPredicted RBP8.12□□□□□ -1.11
VCAN-206ENST00000505615 MTHFRP42898 656 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 ITIH3Q06033 890 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 PGM5Q15124 567 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 QRICH1Q2TAL8 776 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 ZMYM1Q5SVZ6 1142 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 KIAA1841Q6NSI8 718 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 TAF2Q6P1X5 1199 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 MCF2L2Q86YR7 1114 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 SIX5Q8N196 739 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 SVOPQ8N4V2 548 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 PANK1Q8TE04 598 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 WHAMMQ8TF30 809 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 RIN2Q8WYP3 895 aaPredicted RBP8.12□□□□□ -1.11
VCAN-206ENST00000505615 CASP10Q92851 521 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 HINFPQ9BQA5 517 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 USP26Q9BXU7 913 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 TMX1Q9H3N1 280 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 CWH43Q9H720 699 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 MLXIPQ9HAP2 919 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 ECHDC1Q9NTX5 307 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 TMEM260Q9NX78 707 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 PGPEP1Q9NXJ5 209 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 DUSP12Q9UNI6 340 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 LZTS1Q9Y250 596 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 PCDHB12Q9Y5F1 795 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 HCFC2Q9Y5Z7 792 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 LAMA4Q16363 1823 aa8.12□□□□□ -1.11
VCAN-206ENST00000505615 KRBA1A5PL33 1030 aa8.11□□□□□ -1.11
VCAN-206ENST00000505615 HMMRO75330 724 aa8.11□□□□□ -1.11
VCAN-206ENST00000505615 EOMESO95936 686 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms