RNA–Protein interactions for RNA: ENST00000502575.1

PDE4D-209, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-209ENST00000502575 ALG1Q9BT22 464 aa10.06□□□□□ -0.8
PDE4D-209ENST00000502575 PHACTR1Q9C0D0 580 aa10.06□□□□□ -0.8
PDE4D-209ENST00000502575 PRDM12Q9H4Q4 367 aa10.06□□□□□ -0.8
PDE4D-209ENST00000502575 PLXNA4Q9HCM2 1894 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 SPDYE3A6NKU9 549 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 HAS3O00219 553 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 PROCP04070 461 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 ITGB2P05107 769 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 SUPT20HL2P0C7V6 817 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 COL8A1P27658 744 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 CCND2P30279 289 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 MCM5P33992 734 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 PCBP4P57723 403 aaKnown RBP10.05□□□□□ -0.8
PDE4D-209ENST00000502575 PTPN11Q06124 597 aaPredicted RBP10.05□□□□□ -0.8
PDE4D-209ENST00000502575 ADGRE1Q14246 886 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 GPNMBQ14956 572 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 DGKDQ16760 1214 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 BMP2KLQ5H9B9 411 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 CELF3Q5SZQ8 465 aaKnown RBP10.05□□□□□ -0.8
PDE4D-209ENST00000502575 CASC1Q6TDU7 716 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 NFXL1Q6ZNB6 911 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 TMCO2Q7Z6W1 182 aaPredicted RBP10.05□□□□□ -0.8
PDE4D-209ENST00000502575 SYT9Q86SS6 491 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 SESTD1Q86VW0 696 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 DHX37Q8IY37 1157 aaKnown RBP10.05□□□□□ -0.8
PDE4D-209ENST00000502575 CCDC82Q8N4S0 544 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 TSEN2Q8NCE0 465 aaKnown RBP10.05□□□□□ -0.8
PDE4D-209ENST00000502575 PPTC7Q8NI37 304 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 CTCFLQ8NI51 663 aaPredicted RBP10.05□□□□□ -0.8
PDE4D-209ENST00000502575 TNFRSF25Q93038 417 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 SPZ1Q9BXG8 430 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 PRDM6Q9NQX0 595 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 HDAC6Q9UBN7 1215 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 GTF2IRD1Q9UHL9 959 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 SLC4A7Q9Y6M7 1214 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 TTC3P53804 2025 aa10.05□□□□□ -0.8
PDE4D-209ENST00000502575 KRBA1A5PL33 1030 aa10.04□□□□□ -0.8
PDE4D-209ENST00000502575 CCDC69A6NI79 296 aa10.04□□□□□ -0.8
PDE4D-209ENST00000502575 SFI1A8K8P3 1242 aa10.04□□□□□ -0.8
PDE4D-209ENST00000502575 MEIS2O14770 477 aa10.04□□□□□ -0.8
PDE4D-209ENST00000502575 HOXD8P13378 290 aaPredicted RBP10.04□□□□□ -0.8
PDE4D-209ENST00000502575 CASTP20810 708 aaKnown RBP10.04□□□□□ -0.8
PDE4D-209ENST00000502575 UBE2SQ16763 222 aa10.04□□□□□ -0.8
PDE4D-209ENST00000502575 KIAA0753Q2KHM9 967 aa10.04□□□□□ -0.8
PDE4D-209ENST00000502575 ADCK5Q3MIX3 580 aa10.04□□□□□ -0.8
PDE4D-209ENST00000502575 CENPQQ7L2Z9 268 aaPredicted RBP10.04□□□□□ -0.8
PDE4D-209ENST00000502575 SPRED2Q7Z698 418 aa10.04□□□□□ -0.8
PDE4D-209ENST00000502575 MICU3Q86XE3 530 aa10.04□□□□□ -0.8
PDE4D-209ENST00000502575 RPUSD2Q8IZ73 545 aaKnown RBP10.04□□□□□ -0.8
PDE4D-209ENST00000502575 RRP36Q96EU6 259 aaKnown RBP10.04□□□□□ -0.8
PDE4D-209ENST00000502575 SPATA33Q96N06 139 aa10.04□□□□□ -0.8
PDE4D-209ENST00000502575 MAP3K14Q99558 947 aa10.04□□□□□ -0.8
PDE4D-209ENST00000502575 MDFIQ99750 246 aa10.04□□□□□ -0.8
PDE4D-209ENST00000502575 C2orf49Q9BVC5 232 aaPredicted RBP10.04□□□□□ -0.8
PDE4D-209ENST00000502575 MAP3K20Q9NYL2 800 aaKnown RBP10.04□□□□□ -0.8
PDE4D-209ENST00000502575 RTEL1Q9NZ71 1219 aa10.04□□□□□ -0.8
PDE4D-209ENST00000502575 ARID2Q68CP9 1835 aa10.04□□□□□ -0.8
PDE4D-209ENST00000502575 LOC100996750A0A140TA64 210 aa10.03□□□□□ -0.8
PDE4D-209ENST00000502575 CKBP12277 381 aa10.03□□□□□ -0.8
PDE4D-209ENST00000502575 ATP2A2P16615 1042 aaKnown RBP10.03□□□□□ -0.8
PDE4D-209ENST00000502575 KIF5BP33176 963 aa10.03□□□□□ -0.8
PDE4D-209ENST00000502575 BFSP2Q13515 415 aa10.03□□□□□ -0.8
PDE4D-209ENST00000502575 MBTPS1Q14703 1052 aa10.03□□□□□ -0.8
PDE4D-209ENST00000502575 RAB30Q15771 203 aa10.03□□□□□ -0.8
PDE4D-209ENST00000502575 TRIM71Q2Q1W2 868 aaKnown RBP10.03□□□□□ -0.8
PDE4D-209ENST00000502575 SH3PXD2AQ5TCZ1 1133 aa10.03□□□□□ -0.8
PDE4D-209ENST00000502575 IER5Q5VY09 327 aa10.03□□□□□ -0.8
PDE4D-209ENST00000502575 TMTC3Q6ZXV5 915 aa10.03□□□□□ -0.8
PDE4D-209ENST00000502575 LRRC8DQ7L1W4 858 aa10.03□□□□□ -0.8
PDE4D-209ENST00000502575 C7orf31Q8N865 590 aa10.03□□□□□ -0.8
PDE4D-209ENST00000502575 PPM1EQ8WY54 764 aa10.03□□□□□ -0.8
PDE4D-209ENST00000502575 TMEM87BQ96K49 555 aa10.03□□□□□ -0.8
PDE4D-209ENST00000502575 INPP4AQ96PE3 977 aaPredicted RBP10.03□□□□□ -0.8
PDE4D-209ENST00000502575 C16orf70Q9BSU1 422 aa10.03□□□□□ -0.8
PDE4D-209ENST00000502575 KRTAP4-6Q9BYQ5 205 aa10.03□□□□□ -0.8
PDE4D-209ENST00000502575 FTOQ9C0B1 505 aaKnown RBP eCLIP10.03□□□□□ -0.8
PDE4D-209ENST00000502575 MTIF3Q9H2K0 278 aaKnown RBP10.03□□□□□ -0.8
PDE4D-209ENST00000502575 BRD7Q9NPI1 651 aa10.03□□□□□ -0.8
PDE4D-209ENST00000502575 MSRAQ9UJ68 235 aa10.03□□□□□ -0.8
PDE4D-209ENST00000502575 BRPF3Q9ULD4 1205 aa10.03□□□□□ -0.8
PDE4D-209ENST00000502575 COL4A6Q14031 1691 aa10.02□□□□□ -0.8
PDE4D-209ENST00000502575 EPOPA6NHQ4 379 aa10.02□□□□□ -0.81
PDE4D-209ENST00000502575 RFXAPO00287 272 aa10.02□□□□□ -0.81
PDE4D-209ENST00000502575 NBNO60934 754 aa10.02□□□□□ -0.81
PDE4D-209ENST00000502575 LGALS2P05162 132 aa10.02□□□□□ -0.81
PDE4D-209ENST00000502575 CA3P07451 260 aa10.02□□□□□ -0.81
PDE4D-209ENST00000502575 PFKMP08237 780 aa10.02□□□□□ -0.81
PDE4D-209ENST00000502575 CPA1P15085 419 aa10.02□□□□□ -0.81
PDE4D-209ENST00000502575 RFC2P35250 354 aa10.02□□□□□ -0.81
PDE4D-209ENST00000502575 LIFRP42702 1097 aa10.02□□□□□ -0.81
PDE4D-209ENST00000502575 SP4Q02446 784 aa10.02□□□□□ -0.81
PDE4D-209ENST00000502575 TYRO3Q06418 890 aa10.02□□□□□ -0.81
PDE4D-209ENST00000502575 APOA5Q6Q788 366 aa10.02□□□□□ -0.81
PDE4D-209ENST00000502575 CYFIP1Q7L576 1253 aa10.02□□□□□ -0.81
PDE4D-209ENST00000502575 SAMD3Q8N6K7 520 aa10.02□□□□□ -0.81
PDE4D-209ENST00000502575 RETREG2Q8NC44 543 aa10.02□□□□□ -0.81
PDE4D-209ENST00000502575 SMARCC2Q8TAQ2 1214 aa10.02□□□□□ -0.81
PDE4D-209ENST00000502575 CAGE1Q8TC20 777 aa10.02□□□□□ -0.81
PDE4D-209ENST00000502575 AFAP1L1Q8TED9 768 aa10.02□□□□□ -0.81
PDE4D-209ENST00000502575 SUSD3Q96L08 255 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms