RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	SFR1	Q86XK3	245 aa		13.46	□□□□□ -0.25
MATR3-231	ENST00000502394	DHX40	Q8IX18	779 aa	Known RBP	13.46	□□□□□ -0.25
MATR3-231	ENST00000502394	AP5M1	Q9H0R1	490 aa		13.46	□□□□□ -0.25
MATR3-231	ENST00000502394	RNPEP	Q9H4A4	650 aa		13.46	□□□□□ -0.25
MATR3-231	ENST00000502394	PARVG	Q9HBI0	331 aa		13.46	□□□□□ -0.25
MATR3-231	ENST00000502394	PTPN22	Q9Y2R2	807 aa		13.46	□□□□□ -0.25
MATR3-231	ENST00000502394	HTT	P42858	3142 aa		13.46	□□□□□ -0.25
MATR3-231	ENST00000502394	COL1A2	P08123	1366 aa		13.45	□□□□□ -0.26
MATR3-231	ENST00000502394		H3BRB1	525 aa		13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	TBCA	O75347	108 aa	Known RBP	13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	MAF	O75444	373 aa	Predicted RBP	13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	FAM13A	O94988	1023 aa		13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	INHA	P05111	366 aa		13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	MAPT	P10636	758 aa	Known RBP	13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	HSPA8	P11142	646 aa	Known RBP	13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	CST5	P28325	142 aa	Predicted RBP	13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	ERCC5	P28715	1186 aa	Predicted RBP	13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	PPP1R2	P41236	205 aa		13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	RTP1	P59025	263 aa		13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	EMC2	Q15006	297 aa		13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	FSCN1	Q16658	493 aa	Known RBP	13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	ZNF484	Q5JVG2	852 aa		13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	GUF1	Q8N442	669 aa	Known RBP	13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	LINC01465	Q8N7H1	131 aa		13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	GLIS3	Q8NEA6	775 aa		13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	MCPH1	Q8NEM0	835 aa		13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	KLHDC9	Q8NEP7	349 aa		13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	KCNN1	Q92952	543 aa		13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	CCDC43	Q96MW1	224 aa	Known RBP	13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	STRA6	Q9BX79	667 aa		13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	TUT1	Q9H6E5	874 aa	Known RBP	13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	ATP6V0A4	Q9HBG4	840 aa		13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	POLD4	Q9HCU8	107 aa		13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	SLC39A2	Q9NP94	309 aa		13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	GPRC5C	Q9NQ84	441 aa		13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	DDX20	Q9UHI6	824 aa	Known RBP	13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	DACH1	Q9UI36	760 aa		13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	ZNF215	Q9UL58	517 aa	Predicted RBP	13.45	□□□□□ -0.26
MATR3-231	ENST00000502394	GOLGA6L3	A6NEY3	463 aa		13.44	□□□□□ -0.26
MATR3-231	ENST00000502394	SFI1	A8K8P3	1242 aa		13.44	□□□□□ -0.26
MATR3-231	ENST00000502394	IKBKB	O14920	756 aa		13.44	□□□□□ -0.26
MATR3-231	ENST00000502394	RARB	P10826	455 aa		13.44	□□□□□ -0.26
MATR3-231	ENST00000502394	PLS3	P13797	630 aa		13.44	□□□□□ -0.26
MATR3-231	ENST00000502394	INSRR	P14616	1297 aa		13.44	□□□□□ -0.26
MATR3-231	ENST00000502394	HOXC8	P31273	242 aa		13.44	□□□□□ -0.26
MATR3-231	ENST00000502394	ARL2	P36404	184 aa		13.44	□□□□□ -0.26
MATR3-231	ENST00000502394	CASP5	P51878	434 aa		13.44	□□□□□ -0.26
MATR3-231	ENST00000502394	PURA	Q00577	322 aa	Known RBP	13.44	□□□□□ -0.26
MATR3-231	ENST00000502394	BEX3	Q00994	111 aa		13.44	□□□□□ -0.26
MATR3-231	ENST00000502394	BMT2	Q1RMZ1	405 aa		13.44	□□□□□ -0.26
MATR3-231	ENST00000502394	FOXR2	Q6PJQ5	311 aa		13.44	□□□□□ -0.26
MATR3-231	ENST00000502394	RNF214	Q8ND24	703 aa		13.44	□□□□□ -0.26
MATR3-231	ENST00000502394	ENOX1	Q8TC92	643 aa	Known RBP	13.44	□□□□□ -0.26
MATR3-231	ENST00000502394	BSND	Q8WZ55	320 aa		13.44	□□□□□ -0.26
MATR3-231	ENST00000502394	KIFAP3	Q92845	792 aa		13.44	□□□□□ -0.26
MATR3-231	ENST00000502394	DRC1	Q96MC2	740 aa		13.44	□□□□□ -0.26
MATR3-231	ENST00000502394	KRTAP3-3	Q9BYR6	98 aa		13.44	□□□□□ -0.26
MATR3-231	ENST00000502394	KRTAP3-2	Q9BYR7	98 aa		13.44	□□□□□ -0.26
MATR3-231	ENST00000502394	NAT10	Q9H0A0	1025 aa	Known RBP	13.44	□□□□□ -0.26
MATR3-231	ENST00000502394	HSD3B7	Q9H2F3	369 aa		13.44	□□□□□ -0.26
MATR3-231	ENST00000502394	ST6GALNAC4	Q9H4F1	302 aa		13.44	□□□□□ -0.26
MATR3-231	ENST00000502394	C17orf75	Q9HAS0	396 aa		13.44	□□□□□ -0.26
MATR3-231	ENST00000502394	GAS2	O43903	313 aa	Known RBP	13.43	□□□□□ -0.26
MATR3-231	ENST00000502394	KPNA6	O60684	536 aa		13.43	□□□□□ -0.26
MATR3-231	ENST00000502394	C22orf31	O95567	290 aa		13.43	□□□□□ -0.26
MATR3-231	ENST00000502394	CNGA1	P29973	690 aa		13.43	□□□□□ -0.26
MATR3-231	ENST00000502394	PSEN2	P49810	448 aa		13.43	□□□□□ -0.26
MATR3-231	ENST00000502394	POLG	P54098	1239 aa	Predicted RBP	13.43	□□□□□ -0.26
MATR3-231	ENST00000502394	SOX10	P56693	466 aa		13.43	□□□□□ -0.26
MATR3-231	ENST00000502394	UVSSA	Q2YD98	709 aa		13.43	□□□□□ -0.26
MATR3-231	ENST00000502394	ZCWPW2	Q504Y3	356 aa		13.43	□□□□□ -0.26
MATR3-231	ENST00000502394	BRDT	Q58F21	947 aa	Predicted RBP	13.43	□□□□□ -0.26
MATR3-231	ENST00000502394	CENPP	Q6IPU0	288 aa		13.43	□□□□□ -0.26
MATR3-231	ENST00000502394	ZNF720	Q7Z2F6	126 aa		13.43	□□□□□ -0.26
MATR3-231	ENST00000502394	LUZP1	Q86V48	1076 aa		13.43	□□□□□ -0.26
MATR3-231	ENST00000502394	MYCT1	Q8N699	235 aa		13.43	□□□□□ -0.26
MATR3-231	ENST00000502394	AOPEP	Q8N6M6	819 aa		13.43	□□□□□ -0.26
MATR3-231	ENST00000502394	SCFD1	Q8WVM8	642 aa		13.43	□□□□□ -0.26
MATR3-231	ENST00000502394	SPIRE2	Q8WWL2	714 aa		13.43	□□□□□ -0.26
MATR3-231	ENST00000502394	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.43	□□□□□ -0.26
MATR3-231	ENST00000502394	NTPCR	Q9BSD7	190 aa	Known RBP	13.43	□□□□□ -0.26
MATR3-231	ENST00000502394	GRPEL1	Q9HAV7	217 aa		13.43	□□□□□ -0.26
MATR3-231	ENST00000502394	LARS	Q9P2J5	1176 aa	Known RBP	13.43	□□□□□ -0.26
MATR3-231	ENST00000502394	RWDD2A	Q9UIY3	292 aa		13.43	□□□□□ -0.26
MATR3-231	ENST00000502394	SCN10A	Q9Y5Y9	1956 aa		13.43	□□□□□ -0.26
MATR3-231	ENST00000502394	EIF3D	O15371	548 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	MSC	O60682	206 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	PGK1	P00558	417 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	NUDT7	P0C024	238 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	C6orf222	P0C671	652 aa	Predicted RBP	13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	MYB	P10242	640 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	CCNE1	P24864	410 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	NMT1	P30419	496 aa	Known RBP	13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	HOXD13	P35453	343 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	PMS1	P54277	932 aa	Known RBP	13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	NCKAP1L	P55160	1127 aa		13.42	□□□□□ -0.26
MATR3-231	ENST00000502394	ADAM17	P78536	824 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms