RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 GPC3P51654 580 aa20.92■□□□□ 0.94
PRKCB-209ENST00000498058 LRCH2Q5VUJ6 765 aa20.92■□□□□ 0.94
PRKCB-209ENST00000498058 SMRP1Q8NCR6 262 aa20.92■□□□□ 0.94
PRKCB-209ENST00000498058 SH2D3AQ9BRG2 576 aa20.92■□□□□ 0.94
PRKCB-209ENST00000498058 TCEAL9Q9UHQ7 104 aa20.92■□□□□ 0.94
PRKCB-209ENST00000498058 PCDHA4Q9UN74 947 aa20.92■□□□□ 0.94
PRKCB-209ENST00000498058 PCDHB12Q9Y5F1 795 aa20.92■□□□□ 0.94
PRKCB-209ENST00000498058 CSDE1O75534 798 aaKnown RBP20.91■□□□□ 0.94
PRKCB-209ENST00000498058 EIF4BP23588 611 aaKnown RBP20.91■□□□□ 0.94
PRKCB-209ENST00000498058 PBX3P40426 434 aa20.91■□□□□ 0.94
PRKCB-209ENST00000498058 COASYQ13057 564 aa20.91■□□□□ 0.94
PRKCB-209ENST00000498058 Q4G0T1 1027 aa20.91■□□□□ 0.94
PRKCB-209ENST00000498058 FAM43BQ6ZT52 329 aaPredicted RBP20.91■□□□□ 0.94
PRKCB-209ENST00000498058 ECHDC2Q86YB7 292 aa20.91■□□□□ 0.94
PRKCB-209ENST00000498058 TEKT3Q9BXF9 490 aa20.91■□□□□ 0.94
PRKCB-209ENST00000498058 UPF3BQ9BZI7 483 aaKnown RBP20.91■□□□□ 0.94
PRKCB-209ENST00000498058 TLE6Q9H808 572 aa20.91■□□□□ 0.94
PRKCB-209ENST00000498058 TLR9Q9NR96 1032 aa20.91■□□□□ 0.94
PRKCB-209ENST00000498058 NRBP2Q9NSY0 501 aa20.91■□□□□ 0.94
PRKCB-209ENST00000498058 MUTYHQ9UIF7 546 aa20.91■□□□□ 0.94
PRKCB-209ENST00000498058 TECTAO75443 2155 aa20.9■□□□□ 0.94
PRKCB-209ENST00000498058 CYP3A7-CYP3A51PA0A087WV96 503 aa20.9■□□□□ 0.94
PRKCB-209ENST00000498058 CYP3A7P24462 503 aa20.9■□□□□ 0.94
PRKCB-209ENST00000498058 HOXD11P31277 338 aaPredicted RBP20.9■□□□□ 0.94
PRKCB-209ENST00000498058 UBE3AQ05086 875 aa20.9■□□□□ 0.94
PRKCB-209ENST00000498058 SSRP1Q08945 709 aaKnown RBP20.9■□□□□ 0.94
PRKCB-209ENST00000498058 STK3Q13188 491 aa20.9■□□□□ 0.94
PRKCB-209ENST00000498058 CLLU1OSQ5K130 101 aa20.9■□□□□ 0.94
PRKCB-209ENST00000498058 RNF135Q8IUD6 432 aa20.9■□□□□ 0.94
PRKCB-209ENST00000498058 THNSL1Q8IYQ7 743 aa20.9■□□□□ 0.94
PRKCB-209ENST00000498058 MICAL1Q8TDZ2 1067 aa20.9■□□□□ 0.94
PRKCB-209ENST00000498058 MBOAT7Q96N66 472 aa20.9■□□□□ 0.94
PRKCB-209ENST00000498058 MAP7D2Q96T17 732 aa20.9■□□□□ 0.94
PRKCB-209ENST00000498058 TMEM117Q9H0C3 514 aa20.9■□□□□ 0.94
PRKCB-209ENST00000498058 MUC6Q6W4X9 2439 aa20.9■□□□□ 0.94
PRKCB-209ENST00000498058 DARSP14868 501 aaKnown RBP20.89■□□□□ 0.93
PRKCB-209ENST00000498058 ATF7P17544 494 aaPredicted RBP20.89■□□□□ 0.93
PRKCB-209ENST00000498058 SFNP31947 248 aa20.89■□□□□ 0.93
PRKCB-209ENST00000498058 JAK3P52333 1124 aa20.89■□□□□ 0.93
PRKCB-209ENST00000498058 KCNC3Q14003 757 aa20.89■□□□□ 0.93
PRKCB-209ENST00000498058 DUSP6Q16828 381 aa20.89■□□□□ 0.93
PRKCB-209ENST00000498058 ZNF598Q86UK7 904 aaKnown RBP20.89■□□□□ 0.93
PRKCB-209ENST00000498058 BLIDQ8IZY5 108 aa20.89■□□□□ 0.93
PRKCB-209ENST00000498058 ETNPPLQ8TBG4 499 aa20.89■□□□□ 0.93
PRKCB-209ENST00000498058 PPP2R3CQ969Q6 453 aa20.89■□□□□ 0.93
PRKCB-209ENST00000498058 ZNF274Q96GC6 653 aaPredicted RBP20.89■□□□□ 0.93
PRKCB-209ENST00000498058 AAASQ9NRG9 546 aa20.89■□□□□ 0.93
PRKCB-209ENST00000498058 USP15Q9Y4E8 981 aaPredicted RBP20.89■□□□□ 0.93
PRKCB-209ENST00000498058 DEXIO95424 95 aa20.88■□□□□ 0.93
PRKCB-209ENST00000498058 TMOD1P28289 359 aa20.88■□□□□ 0.93
PRKCB-209ENST00000498058 MTERF2Q49AM1 385 aa20.88■□□□□ 0.93
PRKCB-209ENST00000498058 MIER3Q7Z3K6 550 aa20.88■□□□□ 0.93
PRKCB-209ENST00000498058 DAGLBQ8NCG7 672 aa20.88■□□□□ 0.93
PRKCB-209ENST00000498058 NIFKQ9BYG3 293 aaKnown RBP20.88■□□□□ 0.93
PRKCB-209ENST00000498058 KCNJ14Q9UNX9 436 aa20.88■□□□□ 0.93
PRKCB-209ENST00000498058 CYP46A1Q9Y6A2 500 aa20.88■□□□□ 0.93
PRKCB-209ENST00000498058 ZNF318Q5VUA4 2279 aa20.87■□□□□ 0.93
PRKCB-209ENST00000498058 IGKV6-21A0A0C4DH24 114 aa20.87■□□□□ 0.93
PRKCB-209ENST00000498058 LOC730098B7Z3J9 87 aa20.87■□□□□ 0.93
PRKCB-209ENST00000498058 EML1O00423 815 aa20.87■□□□□ 0.93
PRKCB-209ENST00000498058 SLC37A4O43826 429 aa20.87■□□□□ 0.93
PRKCB-209ENST00000498058 LAG3P18627 525 aa20.87■□□□□ 0.93
PRKCB-209ENST00000498058 PLCB3Q01970 1234 aa20.87■□□□□ 0.93
PRKCB-209ENST00000498058 TBC1D8BQ0IIM8 1120 aa20.87■□□□□ 0.93
PRKCB-209ENST00000498058 HERC4Q5GLZ8 1057 aaPredicted RBP20.87■□□□□ 0.93
PRKCB-209ENST00000498058 PLPP4Q5VZY2 271 aa20.87■□□□□ 0.93
PRKCB-209ENST00000498058 KCNT2Q6UVM3 1135 aa20.87■□□□□ 0.93
PRKCB-209ENST00000498058 TRIM22Q8IYM9 498 aa20.87■□□□□ 0.93
PRKCB-209ENST00000498058 MRPS27Q92552 414 aaKnown RBP20.87■□□□□ 0.93
PRKCB-209ENST00000498058 TM6SF1Q9BZW5 370 aa20.87■□□□□ 0.93
PRKCB-209ENST00000498058 GJB4Q9NTQ9 266 aa20.87■□□□□ 0.93
PRKCB-209ENST00000498058 RNF216Q9NWF9 866 aaPredicted RBP20.87■□□□□ 0.93
PRKCB-209ENST00000498058 SEPT9Q9UHD8 586 aaPredicted RBP20.87■□□□□ 0.93
PRKCB-209ENST00000498058 HIDE1A8MVS5 230 aa20.86■□□□□ 0.93
PRKCB-209ENST00000498058 EPB41L2O43491 1005 aaKnown RBP20.86■□□□□ 0.93
PRKCB-209ENST00000498058 ZSCAN20P17040 1043 aaPredicted RBP20.86■□□□□ 0.93
PRKCB-209ENST00000498058 INF2Q27J81 1249 aa20.86■□□□□ 0.93
PRKCB-209ENST00000498058 HFE2Q6ZVN8 426 aa20.86■□□□□ 0.93
PRKCB-209ENST00000498058 RNF169Q8NCN4 708 aa20.86■□□□□ 0.93
PRKCB-209ENST00000498058 RDM1Q8NG50 284 aa20.86■□□□□ 0.93
PRKCB-209ENST00000498058 POP1Q99575 1024 aaKnown RBP20.86■□□□□ 0.93
PRKCB-209ENST00000498058 LZTS1Q9Y250 596 aa20.86■□□□□ 0.93
PRKCB-209ENST00000498058 A0A087WZ62 844 aa20.85■□□□□ 0.93
PRKCB-209ENST00000498058 A0A0U1RQF3 1178 aa20.85■□□□□ 0.93
PRKCB-209ENST00000498058 SCRN1Q12765 414 aa20.85■□□□□ 0.93
PRKCB-209ENST00000498058 CSPP1Q1MSJ5 1256 aa20.85■□□□□ 0.93
PRKCB-209ENST00000498058 XKR3Q5GH77 459 aa20.85■□□□□ 0.93
PRKCB-209ENST00000498058 ANO5Q75V66 913 aa20.85■□□□□ 0.93
PRKCB-209ENST00000498058 ZNF579Q8NAF0 562 aaKnown RBP20.85■□□□□ 0.93
PRKCB-209ENST00000498058 HELQQ8TDG4 1101 aa20.85■□□□□ 0.93
PRKCB-209ENST00000498058 NLRP7Q8WX94 980 aa20.85■□□□□ 0.93
PRKCB-209ENST00000498058 SUSD6Q92537 303 aa20.85■□□□□ 0.93
PRKCB-209ENST00000498058 FDXACB1Q9BRP7 624 aaPredicted RBP20.85■□□□□ 0.93
PRKCB-209ENST00000498058 CPLX1O14810 134 aa20.84■□□□□ 0.93
PRKCB-209ENST00000498058 CBX2Q14781 532 aaPredicted RBP20.84■□□□□ 0.93
PRKCB-209ENST00000498058 NONOQ15233 471 aaKnown RBP eCLIP20.84■□□□□ 0.932e-7■□□□□ 10
PRKCB-209ENST00000498058 PLA2G4FQ68DD2 849 aa20.84■□□□□ 0.93
PRKCB-209ENST00000498058 SYCE2Q6PIF2 218 aa20.84■□□□□ 0.93
PRKCB-209ENST00000498058 MOXD1Q6UVY6 613 aa20.84■□□□□ 0.93
PRKCB-209ENST00000498058 KSR1Q8IVT5 923 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms