RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 TBX18O95935 607 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 HSP90AB1P08238 724 aaKnown RBP7.06□□□□□ -1.28
BRCA1-224ENST00000497488 ZNF865P0CJ78 1059 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-224ENST00000497488 HARSP12081 509 aaKnown RBP7.06□□□□□ -1.28
BRCA1-224ENST00000497488 CKMT1AP12532 417 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 GLULP15104 373 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 CNTFP26441 200 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 KRT20P35900 424 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 NOP2P46087 812 aaKnown RBP7.06□□□□□ -1.28
BRCA1-224ENST00000497488 USP11P51784 963 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 PFKPQ01813 784 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 ROR1Q01973 937 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 FOXO1Q12778 655 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 KIF22Q14807 665 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 PFKFB4Q16877 469 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 MUM1Q2TAK8 710 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 CCDC92Q53HC0 331 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-224ENST00000497488 CCDC30Q5VVM6 783 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 NEK10Q6ZWH5 1172 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 WFDC8Q8IUA0 241 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 CCDC33Q8N5R6 958 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 OR10H5Q8NGA6 315 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 RAX2Q96IS3 184 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 PKNOX2Q96KN3 472 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 NT5C1BQ96P26 610 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 SORBS1Q9BX66 1292 aaKnown RBP7.06□□□□□ -1.28
BRCA1-224ENST00000497488 TMPRSS13Q9BYE2 586 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 UNKQ9C0B0 810 aaKnown RBP7.06□□□□□ -1.28
BRCA1-224ENST00000497488 BRD9Q9H8M2 597 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 CNTD2Q9H8S5 307 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 PNPLA8Q9NP80 782 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 SLC13A4Q9UKG4 626 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 NR2E3Q9Y5X4 410 aa7.06□□□□□ -1.28
BRCA1-224ENST00000497488 THOC2Q8NI27 1593 aaKnown RBP7.06□□□□□ -1.28
BRCA1-224ENST00000497488 ELOA3CA0A087WX78 387 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-224ENST00000497488 GOLGA6L3A6NEY3 463 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 ELOA3DA6NLF2 546 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-224ENST00000497488 TOR1BO14657 336 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 APOL1O14791 398 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 PLA2G6O60733 806 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 TIPRLO75663 272 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 TMEM253P0C7T8 217 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 ADH5P11766 374 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 ATP1A3P13637 1013 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 GALNSP34059 522 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 LIFRP42702 1097 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 LSAMPQ13449 338 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 DAG1Q14118 895 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 CCNG2Q16589 344 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 SLC35G1Q2M3R5 365 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 ELOA3BQ3SY89 546 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 PAN2Q504Q3 1202 aaKnown RBP7.05□□□□□ -1.28
BRCA1-224ENST00000497488 PITRM1Q5JRX3 1037 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 LCE2AQ5TA79 106 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-224ENST00000497488 LCE2CQ5TA81 110 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 EEF1DP3Q658K8 133 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 MBLAC2Q68D91 279 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 CCDC62Q6P9F0 684 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 C20orf204Q6ZNR8 217 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 ARHGAP36Q6ZRI8 547 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 LRRTM4Q86VH4 590 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 HEATR4Q86WZ0 1026 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 SMYD4Q8IYR2 804 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-224ENST00000497488 GALNT15Q8N3T1 639 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 ATG16L2Q8NAA4 619 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 ELOA3Q8NG57 546 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 PLBD2Q8NHP8 589 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 AUTS2Q8WXX7 1259 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 DLG3Q92796 817 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 PTPN18Q99952 460 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 LMAN2LQ9H0V9 348 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 SEMA4AQ9H3S1 761 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 GSX1Q9H4S2 264 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-224ENST00000497488 DACT1Q9NYF0 836 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 KCNK4Q9NYG8 393 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 LRFN1Q9P244 771 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 FBXL7Q9UJT9 491 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 SRPK3Q9UPE1 567 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 STARD13Q9Y3M8 1113 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 B3GALT1Q9Y5Z6 326 aa7.05□□□□□ -1.28
BRCA1-224ENST00000497488 CCDC88BA6NC98 1476 aa7.04□□□□□ -1.28
BRCA1-224ENST00000497488 CFTRP13569 1480 aa7.04□□□□□ -1.28
BRCA1-224ENST00000497488 PDS5BQ9NTI5 1447 aa7.04□□□□□ -1.28
BRCA1-224ENST00000497488 TCRBV5S4A2TA0A5A2 114 aa7.04□□□□□ -1.28
BRCA1-224ENST00000497488 ACKR2O00590 384 aa7.04□□□□□ -1.28
BRCA1-224ENST00000497488 MYO1BO43795 1136 aa7.04□□□□□ -1.28
BRCA1-224ENST00000497488 IL18RAPO95256 599 aa7.04□□□□□ -1.28
BRCA1-224ENST00000497488 XPAP23025 273 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-224ENST00000497488 CD68P34810 354 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-224ENST00000497488 ITGA8P53708 1063 aa7.04□□□□□ -1.28
BRCA1-224ENST00000497488 BCAR1P56945 870 aa7.04□□□□□ -1.28
BRCA1-224ENST00000497488 RAB1AP62820 205 aa7.04□□□□□ -1.28
BRCA1-224ENST00000497488 DUSP4Q13115 394 aa7.04□□□□□ -1.28
BRCA1-224ENST00000497488 NMIQ13287 307 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-224ENST00000497488 EPHA7Q15375 998 aa7.04□□□□□ -1.28
BRCA1-224ENST00000497488 C3orf36Q3SXR2 165 aa7.04□□□□□ -1.28
BRCA1-224ENST00000497488 JMJD6Q6NYC1 403 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-224ENST00000497488 LMBR1LQ6UX01 489 aa7.04□□□□□ -1.28
BRCA1-224ENST00000497488 SIMC1Q8NDZ2 872 aa7.04□□□□□ -1.28
BRCA1-224ENST00000497488 UBASH3BQ8TF42 649 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms