RNA–Protein interactions for RNA: ENST00000497469.5

RNF220-218, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-218ENST00000497469 TMEM169Q96HH4 297 aa16.46■□□□□ 0.23
RNF220-218ENST00000497469 ARRDC1-AS1Q9H2J1 176 aa16.46■□□□□ 0.23
RNF220-218ENST00000497469 MAN1C1Q9NR34 630 aa16.46■□□□□ 0.23
RNF220-218ENST00000497469 CACNA2D2Q9NY47 1150 aa16.46■□□□□ 0.23
RNF220-218ENST00000497469 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.46■□□□□ 0.23
RNF220-218ENST00000497469 MYH15Q9Y2K3 1946 aa16.46■□□□□ 0.23
RNF220-218ENST00000497469 FREM2Q5SZK8 3169 aa16.45■□□□□ 0.22
RNF220-218ENST00000497469 CHURC1-FNTBB4DL54 471 aa16.45■□□□□ 0.22
RNF220-218ENST00000497469 AXIN1O15169 862 aa16.45■□□□□ 0.22
RNF220-218ENST00000497469 SLC3A2P08195 630 aaKnown RBP16.45■□□□□ 0.22
RNF220-218ENST00000497469 CTSAP10619 480 aa16.45■□□□□ 0.22
RNF220-218ENST00000497469 KLRC2P26717 231 aa16.45■□□□□ 0.22
RNF220-218ENST00000497469 FNTBP49356 437 aa16.45■□□□□ 0.22
RNF220-218ENST00000497469 PARM1Q6UWI2 310 aa16.45■□□□□ 0.22
RNF220-218ENST00000497469 ARHGAP45Q92619 1136 aa16.45■□□□□ 0.22
RNF220-218ENST00000497469 CDHR5Q9HBB8 845 aa16.45■□□□□ 0.22
RNF220-218ENST00000497469 TICRRQ7Z2Z1 1910 aa16.45■□□□□ 0.22
RNF220-218ENST00000497469 RFPL2O75678 378 aa16.44■□□□□ 0.22
RNF220-218ENST00000497469 SSBP05455 408 aaKnown RBP eCLIP16.44■□□□□ 0.22
RNF220-218ENST00000497469 TOP1P11387 765 aaKnown RBP16.44■□□□□ 0.22
RNF220-218ENST00000497469 HOXA13P31271 388 aaPredicted RBP16.44■□□□□ 0.22
RNF220-218ENST00000497469 NOVP48745 357 aa16.44■□□□□ 0.22
RNF220-218ENST00000497469 BCAR1P56945 870 aa16.44■□□□□ 0.22
RNF220-218ENST00000497469 SEMA3FQ13275 785 aa16.44■□□□□ 0.22
RNF220-218ENST00000497469 FZD5Q13467 585 aa16.44■□□□□ 0.22
RNF220-218ENST00000497469 PPFIBP1Q86W92 1011 aa16.44■□□□□ 0.22
RNF220-218ENST00000497469 ABI1Q8IZP0 508 aa16.44■□□□□ 0.22
RNF220-218ENST00000497469 TMEM57Q8N5G2 664 aa16.44■□□□□ 0.22
RNF220-218ENST00000497469 RNF169Q8NCN4 708 aa16.44■□□□□ 0.22
RNF220-218ENST00000497469 BCL7CQ8WUZ0 217 aaPredicted RBP16.44■□□□□ 0.22
RNF220-218ENST00000497469 TRAPPC12Q8WVT3 735 aa16.44■□□□□ 0.22
RNF220-218ENST00000497469 TMEM40Q8WWA1 233 aa16.44■□□□□ 0.22
RNF220-218ENST00000497469 KLHL5Q96PQ7 755 aa16.44■□□□□ 0.22
RNF220-218ENST00000497469 IRAK3Q9Y616 596 aa16.44■□□□□ 0.22
RNF220-218ENST00000497469 OPLAHO14841 1288 aa16.43■□□□□ 0.22
RNF220-218ENST00000497469 INPPL1O15357 1258 aa16.43■□□□□ 0.22
RNF220-218ENST00000497469 ANP32CO43423 234 aa16.43■□□□□ 0.22
RNF220-218ENST00000497469 RPS6KA5O75582 802 aa16.43■□□□□ 0.22
RNF220-218ENST00000497469 CCND2P30279 289 aa16.43■□□□□ 0.22
RNF220-218ENST00000497469 TCF7P36402 384 aaPredicted RBP16.43■□□□□ 0.22
RNF220-218ENST00000497469 RPS9P46781 194 aaKnown RBP16.43■□□□□ 0.22
RNF220-218ENST00000497469 KRT76Q01546 638 aa16.43■□□□□ 0.22
RNF220-218ENST00000497469 FAM9BQ8IZU0 186 aa16.43■□□□□ 0.22
RNF220-218ENST00000497469 CLASRPQ8N2M8 674 aaKnown RBP16.43■□□□□ 0.22
RNF220-218ENST00000497469 GLIS3Q8NEA6 775 aa16.43■□□□□ 0.22
RNF220-218ENST00000497469 SMG7Q92540 1137 aaKnown RBP16.43■□□□□ 0.22
RNF220-218ENST00000497469 PPP1R16BQ96T49 567 aa16.43■□□□□ 0.22
RNF220-218ENST00000497469 ST3GAL5Q9UNP4 418 aa16.43■□□□□ 0.22
RNF220-218ENST00000497469 HECTD1Q9ULT8 2610 aa16.43■□□□□ 0.22
RNF220-218ENST00000497469 HYAL3O43820 417 aaPredicted RBP16.42■□□□□ 0.22
RNF220-218ENST00000497469 SEC24BO95487 1268 aa16.42■□□□□ 0.22
RNF220-218ENST00000497469 ATP5JP18859 108 aa16.42■□□□□ 0.22
RNF220-218ENST00000497469 ADCY1Q08828 1119 aa16.42■□□□□ 0.22
RNF220-218ENST00000497469 NEDD9Q14511 834 aa16.42■□□□□ 0.22
RNF220-218ENST00000497469 CLLU1OSQ5K130 101 aa16.42■□□□□ 0.22
RNF220-218ENST00000497469 RNF43Q68DV7 783 aa16.42■□□□□ 0.22
RNF220-218ENST00000497469 FRAT1Q92837 279 aaPredicted RBP16.42■□□□□ 0.22
RNF220-218ENST00000497469 KLK13Q9UKR3 277 aa16.42■□□□□ 0.22
RNF220-218ENST00000497469 MRPL11Q9Y3B7 192 aaKnown RBP16.42■□□□□ 0.22
RNF220-218ENST00000497469 PCDHA1Q9Y5I3 950 aa16.42■□□□□ 0.22
RNF220-218ENST00000497469 GREB1Q4ZG55 1949 aa16.41■□□□□ 0.22
RNF220-218ENST00000497469 PATL2C9JE40 543 aaKnown RBP16.41■□□□□ 0.22
RNF220-218ENST00000497469 NCAM2O15394 837 aa16.41■□□□□ 0.22
RNF220-218ENST00000497469 CNPP09543 421 aaKnown RBP16.41■□□□□ 0.22
RNF220-218ENST00000497469 ALDH7A1P49419 539 aaKnown RBP16.41■□□□□ 0.22
RNF220-218ENST00000497469 HSD17B4P51659 736 aa16.41■□□□□ 0.22
RNF220-218ENST00000497469 FAM189BP81408 668 aa16.41■□□□□ 0.22
RNF220-218ENST00000497469 GIT2Q14161 759 aa16.41■□□□□ 0.22
RNF220-218ENST00000497469 QRICH1Q2TAL8 776 aa16.41■□□□□ 0.22
RNF220-218ENST00000497469 SH3PXD2AQ5TCZ1 1133 aa16.41■□□□□ 0.22
RNF220-218ENST00000497469 HEATR6Q6AI08 1181 aaKnown RBP16.41■□□□□ 0.22
RNF220-218ENST00000497469 TCEAL6Q6IPX3 200 aa16.41■□□□□ 0.22
RNF220-218ENST00000497469 CEP68Q76N32 757 aa16.41■□□□□ 0.22
RNF220-218ENST00000497469 PROSER1Q86XN7 944 aa16.41■□□□□ 0.22
RNF220-218ENST00000497469 CMASQ8NFW8 434 aaPredicted RBP16.41■□□□□ 0.22
RNF220-218ENST00000497469 HELQQ8TDG4 1101 aa16.41■□□□□ 0.22
RNF220-218ENST00000497469 APPBP2Q92624 585 aa16.41■□□□□ 0.22
RNF220-218ENST00000497469 TCEAL3Q969E4 200 aa16.41■□□□□ 0.22
RNF220-218ENST00000497469 VN1R3Q9BXE9 311 aa16.41■□□□□ 0.22
RNF220-218ENST00000497469 NAPBQ9H115 298 aa16.41■□□□□ 0.22
RNF220-218ENST00000497469 RTEL1Q9NZ71 1219 aa16.41■□□□□ 0.22
RNF220-218ENST00000497469 NDRG2Q9UN36 371 aaKnown RBP16.41■□□□□ 0.22
RNF220-218ENST00000497469 ZC3H11AO75152 810 aaKnown RBP eCLIP16.4■□□□□ 0.22
RNF220-218ENST00000497469 ZNF806P0C7X5 589 aa16.4■□□□□ 0.22
RNF220-218ENST00000497469 INSRRP14616 1297 aa16.4■□□□□ 0.22
RNF220-218ENST00000497469 GNAT2P19087 354 aa16.4■□□□□ 0.22
RNF220-218ENST00000497469 SATB1Q01826 763 aa16.4■□□□□ 0.22
RNF220-218ENST00000497469 C19orf57Q0VDD7 668 aa16.4■□□□□ 0.22
RNF220-218ENST00000497469 MAF1Q9H063 256 aa16.4■□□□□ 0.22
RNF220-218ENST00000497469 ELAC1Q9H777 363 aaKnown RBP16.4■□□□□ 0.22
RNF220-218ENST00000497469 PLA2G2AP14555 144 aa16.39■□□□□ 0.21
RNF220-218ENST00000497469 TROAPQ12815 778 aa16.39■□□□□ 0.21
RNF220-218ENST00000497469 RSPO2Q6UXX9 243 aaPredicted RBP16.39■□□□□ 0.21
RNF220-218ENST00000497469 STOX1Q6ZVD7 989 aa16.39■□□□□ 0.21
RNF220-218ENST00000497469 DDX53Q86TM3 631 aaKnown RBP16.39■□□□□ 0.21
RNF220-218ENST00000497469 HNRNPLLQ8WVV9 542 aaKnown RBP16.39■□□□□ 0.21
RNF220-218ENST00000497469 ZNF707Q96C28 371 aaPredicted RBP16.39■□□□□ 0.21
RNF220-218ENST00000497469 LRIG1Q96JA1 1093 aa16.39■□□□□ 0.21
RNF220-218ENST00000497469 KXD1Q9BQD3 176 aa16.39■□□□□ 0.21
RNF220-218ENST00000497469 EMILIN2Q9BXX0 1053 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms