RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 CHST12Q9NRB3 414 aa19.02■□□□□ 0.64
TRAPPC3-207ENST00000497251 AKT3Q9Y243 479 aa19.02■□□□□ 0.64
TRAPPC3-207ENST00000497251 CACNA1HO95180 2353 aa19.01■□□□□ 0.63
TRAPPC3-207ENST00000497251 A0A0U1RQF3 1178 aa19.01■□□□□ 0.63
TRAPPC3-207ENST00000497251 REC8O95072 547 aa19.01■□□□□ 0.63
TRAPPC3-207ENST00000497251 VTNP04004 478 aa19.01■□□□□ 0.63
TRAPPC3-207ENST00000497251 OATP04181 439 aa19.01■□□□□ 0.63
TRAPPC3-207ENST00000497251 NTRK3Q16288 839 aa19.01■□□□□ 0.63
TRAPPC3-207ENST00000497251 TRIM67Q6ZTA4 783 aa19.01■□□□□ 0.63
TRAPPC3-207ENST00000497251 LENG9Q96B70 501 aa19.01■□□□□ 0.63
TRAPPC3-207ENST00000497251 CCDC136Q96JN2 1154 aa19.01■□□□□ 0.63
TRAPPC3-207ENST00000497251 JAKMIP1Q96N16 626 aaKnown RBP19.01■□□□□ 0.63
TRAPPC3-207ENST00000497251 ZNF558Q96NG5 402 aa19.01■□□□□ 0.63
TRAPPC3-207ENST00000497251 MRPL9Q9BYD2 267 aaKnown RBP19.01■□□□□ 0.63
TRAPPC3-207ENST00000497251 GAS7O60861 476 aa19■□□□□ 0.63
TRAPPC3-207ENST00000497251 SKIP12755 728 aa19■□□□□ 0.63
TRAPPC3-207ENST00000497251 RPS6KB1P23443 525 aa19■□□□□ 0.63
TRAPPC3-207ENST00000497251 DNM2P50570 870 aa19■□□□□ 0.63
TRAPPC3-207ENST00000497251 ERVFC1P60507 584 aa19■□□□□ 0.63
TRAPPC3-207ENST00000497251 TBC1D8BQ0IIM8 1120 aa19■□□□□ 0.63
TRAPPC3-207ENST00000497251 KCNC3Q14003 757 aa19■□□□□ 0.63
TRAPPC3-207ENST00000497251 GALNT17Q6IS24 598 aa19■□□□□ 0.63
TRAPPC3-207ENST00000497251 KCNT2Q6UVM3 1135 aa19■□□□□ 0.63
TRAPPC3-207ENST00000497251 ECHDC2Q86YB7 292 aa19■□□□□ 0.63
TRAPPC3-207ENST00000497251 TRIM22Q8IYM9 498 aa19■□□□□ 0.63
TRAPPC3-207ENST00000497251 SLC5A5Q92911 643 aa19■□□□□ 0.63
TRAPPC3-207ENST00000497251 FBXL18Q96ME1 805 aa19■□□□□ 0.63
TRAPPC3-207ENST00000497251 CASD1Q96PB1 797 aa19■□□□□ 0.63
TRAPPC3-207ENST00000497251 TRAIPQ9BWF2 469 aa19■□□□□ 0.63
TRAPPC3-207ENST00000497251 TEKT3Q9BXF9 490 aa19■□□□□ 0.63
TRAPPC3-207ENST00000497251 INO80BQ9C086 356 aaPredicted RBP19■□□□□ 0.63
TRAPPC3-207ENST00000497251 SPG21Q9NZD8 308 aa19■□□□□ 0.63
TRAPPC3-207ENST00000497251 BARX2Q9UMQ3 279 aaPredicted RBP19■□□□□ 0.63
TRAPPC3-207ENST00000497251 KIAA1671Q9BY89 1806 aa19■□□□□ 0.63
TRAPPC3-207ENST00000497251 MSH4O15457 936 aa18.99■□□□□ 0.63
TRAPPC3-207ENST00000497251 CSPG5O95196 566 aa18.99■□□□□ 0.63
TRAPPC3-207ENST00000497251 FGFR1P11362 822 aa18.99■□□□□ 0.63
TRAPPC3-207ENST00000497251 DARSP14868 501 aaKnown RBP18.99■□□□□ 0.63
TRAPPC3-207ENST00000497251 CLCN3P51790 818 aa18.99■□□□□ 0.63
TRAPPC3-207ENST00000497251 ZXDAP98168 799 aa18.99■□□□□ 0.63
TRAPPC3-207ENST00000497251 NHLH1Q02575 133 aa18.99■□□□□ 0.63
TRAPPC3-207ENST00000497251 MOXD1Q6UVY6 613 aa18.99■□□□□ 0.63
TRAPPC3-207ENST00000497251 JPH2Q9BR39 696 aaPredicted RBP18.99■□□□□ 0.63
TRAPPC3-207ENST00000497251 NIFKQ9BYG3 293 aaKnown RBP18.99■□□□□ 0.63
TRAPPC3-207ENST00000497251 SNX14Q9Y5W7 946 aa18.99■□□□□ 0.63
TRAPPC3-207ENST00000497251 CYP3A7-CYP3A51PA0A087WV96 503 aa18.98■□□□□ 0.63
TRAPPC3-207ENST00000497251 ZNF862O60290 1169 aa18.98■□□□□ 0.63
TRAPPC3-207ENST00000497251 IBSPP21815 317 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC3-207ENST00000497251 CYP3A7P24462 503 aa18.98■□□□□ 0.63
TRAPPC3-207ENST00000497251 GPC3P51654 580 aa18.98■□□□□ 0.63
TRAPPC3-207ENST00000497251 PRKCEQ02156 737 aa18.98■□□□□ 0.63
TRAPPC3-207ENST00000497251 TARBP2Q15633 366 aaKnown RBP18.98■□□□□ 0.63
TRAPPC3-207ENST00000497251 Q4G0T1 1027 aa18.98■□□□□ 0.63
TRAPPC3-207ENST00000497251 TPRNQ4KMQ1 711 aa18.98■□□□□ 0.63
TRAPPC3-207ENST00000497251 XKR3Q5GH77 459 aa18.98■□□□□ 0.63
TRAPPC3-207ENST00000497251 LRCH2Q5VUJ6 765 aa18.98■□□□□ 0.63
TRAPPC3-207ENST00000497251 ANKRD54Q6NXT1 300 aa18.98■□□□□ 0.63
TRAPPC3-207ENST00000497251 NECTIN4Q96NY8 510 aa18.98■□□□□ 0.63
TRAPPC3-207ENST00000497251 TCF25Q9BQ70 676 aa18.98■□□□□ 0.63
TRAPPC3-207ENST00000497251 GCOM2Q9BZD3 368 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC3-207ENST00000497251 ENTPD7Q9NQZ7 604 aa18.98■□□□□ 0.63
TRAPPC3-207ENST00000497251 STK39Q9UEW8 545 aa18.98■□□□□ 0.63
TRAPPC3-207ENST00000497251 TMEM221A6NGB7 291 aa18.97■□□□□ 0.63
TRAPPC3-207ENST00000497251 M0R296 226 aa18.97■□□□□ 0.63
TRAPPC3-207ENST00000497251 PER2O15055 1255 aa18.97■□□□□ 0.63
TRAPPC3-207ENST00000497251 PDIA3P30101 505 aaKnown RBP18.97■□□□□ 0.63
TRAPPC3-207ENST00000497251 ALDH7A1P49419 539 aaKnown RBP18.97■□□□□ 0.63
TRAPPC3-207ENST00000497251 NLRP5P59047 1200 aa18.97■□□□□ 0.63
TRAPPC3-207ENST00000497251 SIGLEC14Q08ET2 396 aa18.97■□□□□ 0.63
TRAPPC3-207ENST00000497251 GIT2Q14161 759 aa18.97■□□□□ 0.63
TRAPPC3-207ENST00000497251 ALYREFQ86V81 257 aaKnown RBP18.97■□□□□ 0.63
TRAPPC3-207ENST00000497251 ZNF410Q86VK4 478 aa18.97■□□□□ 0.63
TRAPPC3-207ENST00000497251 SUGP1Q8IWZ8 645 aaKnown RBP18.97■□□□□ 0.63
TRAPPC3-207ENST00000497251 EXOC8Q8IYI6 725 aa18.97■□□□□ 0.63
TRAPPC3-207ENST00000497251 CASP10Q92851 521 aa18.97■□□□□ 0.63
TRAPPC3-207ENST00000497251 PHKBQ93100 1093 aa18.97■□□□□ 0.63
TRAPPC3-207ENST00000497251 PBXIP1Q96AQ6 731 aa18.97■□□□□ 0.63
TRAPPC3-207ENST00000497251 SCLT1Q96NL6 688 aa18.97■□□□□ 0.63
TRAPPC3-207ENST00000497251 SLC26A6Q9BXS9 759 aa18.97■□□□□ 0.63
TRAPPC3-207ENST00000497251 IRF2BPLQ9H1B7 796 aa18.97■□□□□ 0.63
TRAPPC3-207ENST00000497251 S1PR5Q9H228 398 aa18.97■□□□□ 0.63
TRAPPC3-207ENST00000497251 PLXNA4Q9HCM2 1894 aa18.97■□□□□ 0.63
TRAPPC3-207ENST00000497251 DKC1O60832 514 aaKnown RBP eCLIP18.96■□□□□ 0.63
TRAPPC3-207ENST00000497251 PSMD10O75832 226 aa18.96■□□□□ 0.63
TRAPPC3-207ENST00000497251 MRE11P49959 708 aa18.96■□□□□ 0.63
TRAPPC3-207ENST00000497251 NUBP1P53384 320 aa18.96■□□□□ 0.63
TRAPPC3-207ENST00000497251 ITIH3Q06033 890 aa18.96■□□□□ 0.63
TRAPPC3-207ENST00000497251 SMC1AQ14683 1233 aaKnown RBP18.96■□□□□ 0.63
TRAPPC3-207ENST00000497251 CPLX2Q6PUV4 134 aaKnown RBP18.96■□□□□ 0.63
TRAPPC3-207ENST00000497251 LRRC55Q6ZSA7 311 aa18.96■□□□□ 0.63
TRAPPC3-207ENST00000497251 TRMT1LQ7Z2T5 733 aaKnown RBP18.96■□□□□ 0.63
TRAPPC3-207ENST00000497251 TMC7Q7Z402 723 aa18.96■□□□□ 0.63
TRAPPC3-207ENST00000497251 ZNF598Q86UK7 904 aaKnown RBP18.96■□□□□ 0.63
TRAPPC3-207ENST00000497251 LRRC71Q8N4P6 559 aa18.96■□□□□ 0.63
TRAPPC3-207ENST00000497251 MRPL43Q8N983 215 aaKnown RBP18.96■□□□□ 0.63
TRAPPC3-207ENST00000497251 NLRP7Q8WX94 980 aa18.96■□□□□ 0.63
TRAPPC3-207ENST00000497251 PPP1R16BQ96T49 567 aa18.96■□□□□ 0.63
TRAPPC3-207ENST00000497251 RNF19AQ9NV58 838 aa18.96■□□□□ 0.63
TRAPPC3-207ENST00000497251 PCDHA4Q9UN74 947 aa18.96■□□□□ 0.63
TRAPPC3-207ENST00000497251 NR2E1Q9Y466 385 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms