RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 ZSCAN31Q96LW9 406 aaPredicted RBP13.69□□□□□ -0.22
HDLBP-246ENST00000496569 NAP1L4Q99733 375 aaKnown RBP13.69□□□□□ -0.22
HDLBP-246ENST00000496569 EIF2AK1Q9BQI3 630 aaKnown RBP13.69□□□□□ -0.22
HDLBP-246ENST00000496569 FDXACB1Q9BRP7 624 aaPredicted RBP13.69□□□□□ -0.22
HDLBP-246ENST00000496569 LLPHQ9BRT6 129 aaKnown RBP13.69□□□□□ -0.22
HDLBP-246ENST00000496569 FTHL17Q9BXU8 183 aa13.69□□□□□ -0.22
HDLBP-246ENST00000496569 CYP26B1Q9NR63 512 aa13.69□□□□□ -0.22
HDLBP-246ENST00000496569 SH2B1Q9NRF2 756 aaPredicted RBP13.69□□□□□ -0.22
HDLBP-246ENST00000496569 IGKV6-21A0A0C4DH24 114 aa13.68□□□□□ -0.22
HDLBP-246ENST00000496569 C9IYK1 514 aa13.68□□□□□ -0.22
HDLBP-246ENST00000496569 GRM6O15303 877 aa13.68□□□□□ -0.22
HDLBP-246ENST00000496569 MAFO75444 373 aaPredicted RBP13.68□□□□□ -0.22
HDLBP-246ENST00000496569 BAG4O95429 457 aaKnown RBP13.68□□□□□ -0.22
HDLBP-246ENST00000496569 DARSP14868 501 aaKnown RBP13.68□□□□□ -0.22
HDLBP-246ENST00000496569 SARSP49591 514 aaKnown RBP13.68□□□□□ -0.22
HDLBP-246ENST00000496569 KCNQ1P51787 676 aa13.68□□□□□ -0.22
HDLBP-246ENST00000496569 SAFBQ15424 915 aaKnown RBP eCLIP13.68□□□□□ -0.22
HDLBP-246ENST00000496569 RHPN2Q8IUC4 686 aa13.68□□□□□ -0.22
HDLBP-246ENST00000496569 TPH2Q8IWU9 490 aa13.68□□□□□ -0.22
HDLBP-246ENST00000496569 FBXO18Q8NFZ0 1043 aa13.68□□□□□ -0.22
HDLBP-246ENST00000496569 TMEM143Q96AN5 459 aa13.68□□□□□ -0.22
HDLBP-246ENST00000496569 TMX3Q96JJ7 454 aa13.68□□□□□ -0.22
HDLBP-246ENST00000496569 CEP170P1Q96L14 293 aa13.68□□□□□ -0.22
HDLBP-246ENST00000496569 NLRP4Q96MN2 994 aa13.68□□□□□ -0.22
HDLBP-246ENST00000496569 MTMR9Q96QG7 549 aa13.68□□□□□ -0.22
HDLBP-246ENST00000496569 TTC12Q9H892 705 aaPredicted RBP13.68□□□□□ -0.22
HDLBP-246ENST00000496569 RNF19AQ9NV58 838 aa13.68□□□□□ -0.22
HDLBP-246ENST00000496569 SUCLA2Q9P2R7 463 aaPredicted RBP13.68□□□□□ -0.22
HDLBP-246ENST00000496569 LRFN2Q9ULH4 789 aa13.68□□□□□ -0.22
HDLBP-246ENST00000496569 TBKBP1A7MCY6 615 aa13.67□□□□□ -0.22
HDLBP-246ENST00000496569 GPR182O15218 404 aa13.67□□□□□ -0.22
HDLBP-246ENST00000496569 EIF4BP23588 611 aaKnown RBP13.67□□□□□ -0.22
HDLBP-246ENST00000496569 YWHABP31946 246 aaKnown RBP13.67□□□□□ -0.22
HDLBP-246ENST00000496569 HMGN5P82970 282 aaKnown RBP13.67□□□□□ -0.22
HDLBP-246ENST00000496569 LONRF3Q496Y0 759 aa13.67□□□□□ -0.22
HDLBP-246ENST00000496569 XKR9Q5GH70 373 aa13.67□□□□□ -0.22
HDLBP-246ENST00000496569 SLFN12Q8IYM2 578 aa13.67□□□□□ -0.22
HDLBP-246ENST00000496569 RNF169Q8NCN4 708 aa13.67□□□□□ -0.22
HDLBP-246ENST00000496569 TBC1D32Q96NH3 1257 aa13.67□□□□□ -0.22
HDLBP-246ENST00000496569 NECAB3Q96P71 396 aaPredicted RBP13.67□□□□□ -0.22
HDLBP-246ENST00000496569 ALG13Q9NP73 1137 aaKnown RBP13.67□□□□□ -0.22
HDLBP-246ENST00000496569 XPNPEP1Q9NQW7 623 aa13.67□□□□□ -0.22
HDLBP-246ENST00000496569 RGS18Q9NS28 235 aa13.67□□□□□ -0.22
HDLBP-246ENST00000496569 PCDHA12Q9UN75 941 aa13.67□□□□□ -0.22
HDLBP-246ENST00000496569 H3BNC9 293 aa13.66□□□□□ -0.22
HDLBP-246ENST00000496569 ST18O60284 1047 aa13.66□□□□□ -0.22
HDLBP-246ENST00000496569 SLITRK3O94933 977 aa13.66□□□□□ -0.22
HDLBP-246ENST00000496569 STAG3L1P0CL83 205 aa13.66□□□□□ -0.22
HDLBP-246ENST00000496569 BMPR1AP36894 532 aa13.66□□□□□ -0.22
HDLBP-246ENST00000496569 POLGP54098 1239 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-246ENST00000496569 GNL2Q13823 731 aaKnown RBP13.66□□□□□ -0.22
HDLBP-246ENST00000496569 EMC2Q15006 297 aa13.66□□□□□ -0.22
HDLBP-246ENST00000496569 TJAP1Q5JTD0 557 aa13.66□□□□□ -0.22
HDLBP-246ENST00000496569 TTC38Q5R3I4 469 aa13.66□□□□□ -0.22
HDLBP-246ENST00000496569 C4orf19Q8IY42 314 aa13.66□□□□□ -0.22
HDLBP-246ENST00000496569 CMTR2Q8IYT2 770 aaKnown RBP13.66□□□□□ -0.22
HDLBP-246ENST00000496569 PIGOQ8TEQ8 1089 aa13.66□□□□□ -0.22
HDLBP-246ENST00000496569 SAMD11Q96NU1 681 aa13.66□□□□□ -0.22
HDLBP-246ENST00000496569 DHX33Q9H6R0 707 aaKnown RBP13.66□□□□□ -0.22
HDLBP-246ENST00000496569 PCDHB7Q9Y5E2 793 aa13.66□□□□□ -0.22
HDLBP-246ENST00000496569 PCDHGC5Q9Y5F6 944 aa13.66□□□□□ -0.22
HDLBP-246ENST00000496569 C5orf42Q9H799 3197 aa13.65□□□□□ -0.22
HDLBP-246ENST00000496569 MED24O75448 989 aa13.65□□□□□ -0.22
HDLBP-246ENST00000496569 ATF7P17544 494 aaPredicted RBP13.65□□□□□ -0.22
HDLBP-246ENST00000496569 DNAJB1P25685 340 aa13.65□□□□□ -0.22
HDLBP-246ENST00000496569 TCEAL5Q5H9L2 206 aa13.65□□□□□ -0.22
HDLBP-246ENST00000496569 SLC24A5Q71RS6 500 aa13.65□□□□□ -0.22
HDLBP-246ENST00000496569 NOSTRINQ8IVI9 506 aa13.65□□□□□ -0.22
HDLBP-246ENST00000496569 CLP1Q92989 425 aaKnown RBP13.65□□□□□ -0.22
HDLBP-246ENST00000496569 MRPL38Q96DV4 380 aaKnown RBP13.65□□□□□ -0.22
HDLBP-246ENST00000496569 ASB2Q96Q27 587 aa13.65□□□□□ -0.22
HDLBP-246ENST00000496569 GCOM2Q9BZD3 368 aaPredicted RBP13.65□□□□□ -0.22
HDLBP-246ENST00000496569 FOXP1Q9H334 677 aaPredicted RBP13.65□□□□□ -0.22
HDLBP-246ENST00000496569 ZSWIM4Q9H7M6 989 aa13.65□□□□□ -0.22
HDLBP-246ENST00000496569 MINDY3Q9H8M7 445 aa13.65□□□□□ -0.22
HDLBP-246ENST00000496569 UPF2Q9HAU5 1272 aaKnown RBP13.65□□□□□ -0.22
HDLBP-246ENST00000496569 C1orf112Q9NSG2 853 aa13.65□□□□□ -0.22
HDLBP-246ENST00000496569 COL4A3BPQ9Y5P4 624 aa13.65□□□□□ -0.22
HDLBP-246ENST00000496569 MYH11P35749 1972 aa13.65□□□□□ -0.22
HDLBP-246ENST00000496569 TDRD15B5MCY1 1934 aaKnown RBP13.64□□□□□ -0.23
HDLBP-246ENST00000496569 MEIS3P2A8K0S8 358 aa13.64□□□□□ -0.23
HDLBP-246ENST00000496569 ITGB1P05556 798 aa13.64□□□□□ -0.23
HDLBP-246ENST00000496569 OR52Z1P0C646 297 aa13.64□□□□□ -0.23
HDLBP-246ENST00000496569 SRGAP2CP0DJJ0 459 aa13.64□□□□□ -0.23
HDLBP-246ENST00000496569 GJB2P29033 226 aa13.64□□□□□ -0.23
HDLBP-246ENST00000496569 GTF2F1P35269 517 aaKnown RBP eCLIP13.64□□□□□ -0.231e-7■■■■□ 24.6
HDLBP-246ENST00000496569 PBX3P40426 434 aa13.64□□□□□ -0.23
HDLBP-246ENST00000496569 TECP42680 631 aa13.64□□□□□ -0.23
HDLBP-246ENST00000496569 DNM2P50570 870 aa13.64□□□□□ -0.23
HDLBP-246ENST00000496569 TOB1P50616 345 aaPredicted RBP13.64□□□□□ -0.23
HDLBP-246ENST00000496569 MRPS5P82675 430 aaKnown RBP13.64□□□□□ -0.23
HDLBP-246ENST00000496569 CAMK1Q14012 370 aa13.64□□□□□ -0.23
HDLBP-246ENST00000496569 ODR4Q5SWX8 454 aa13.64□□□□□ -0.23
HDLBP-246ENST00000496569 SPOUT1Q5T280 376 aaKnown RBP13.64□□□□□ -0.23
HDLBP-246ENST00000496569 POTEGQ6S5H5 508 aa13.64□□□□□ -0.23
HDLBP-246ENST00000496569 ECHDC2Q86YB7 292 aa13.64□□□□□ -0.23
HDLBP-246ENST00000496569 KLHL23Q8NBE8 558 aa13.64□□□□□ -0.23
HDLBP-246ENST00000496569 ASAP3Q8TDY4 903 aa13.64□□□□□ -0.23
HDLBP-246ENST00000496569 ATXN2LQ8WWM7 1075 aaKnown RBP13.64□□□□□ -0.23
HDLBP-246ENST00000496569 PRPF31Q8WWY3 499 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms