RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 LRRC55Q6ZSA7 311 aa13.43□□□□□ -0.26
ATG3-209ENST00000496423 RSPH1Q8WYR4 309 aa13.43□□□□□ -0.26
ATG3-209ENST00000496423 ZKSCAN3Q9BRR0 538 aa13.43□□□□□ -0.26
ATG3-209ENST00000496423 SLC2A4RGQ9NR83 387 aa13.43□□□□□ -0.26
ATG3-209ENST00000496423 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.43□□□□□ -0.26
ATG3-209ENST00000496423 GSTTP1A0A1W2PQM5 241 aa13.42□□□□□ -0.26
ATG3-209ENST00000496423 TGM1P22735 817 aa13.42□□□□□ -0.26
ATG3-209ENST00000496423 PMLP29590 882 aa13.42□□□□□ -0.26
ATG3-209ENST00000496423 METAP2P50579 478 aaKnown RBP eCLIP13.42□□□□□ -0.26
ATG3-209ENST00000496423 PRKCQQ04759 706 aa13.42□□□□□ -0.26
ATG3-209ENST00000496423 SEMA3FQ13275 785 aa13.42□□□□□ -0.26
ATG3-209ENST00000496423 PCNX4Q63HM2 1172 aa13.42□□□□□ -0.26
ATG3-209ENST00000496423 CUL5Q93034 780 aa13.42□□□□□ -0.26
ATG3-209ENST00000496423 NELL2Q99435 816 aa13.42□□□□□ -0.26
ATG3-209ENST00000496423 FOXQ1Q9C009 403 aa13.42□□□□□ -0.26
ATG3-209ENST00000496423 ZBP1Q9H171 429 aa13.42□□□□□ -0.26
ATG3-209ENST00000496423 TTC41PQ6P2S7 1318 aa13.41□□□□□ -0.26
ATG3-209ENST00000496423 RETP07949 1114 aa13.41□□□□□ -0.26
ATG3-209ENST00000496423 BCAR1P56945 870 aa13.41□□□□□ -0.26
ATG3-209ENST00000496423 UBXN2BQ14CS0 331 aa13.41□□□□□ -0.26
ATG3-209ENST00000496423 RSPO2Q6UXX9 243 aaPredicted RBP13.41□□□□□ -0.26
ATG3-209ENST00000496423 DDX53Q86TM3 631 aaKnown RBP13.41□□□□□ -0.26
ATG3-209ENST00000496423 CELF5Q8N6W0 485 aaKnown RBP13.41□□□□□ -0.26
ATG3-209ENST00000496423 CMASQ8NFW8 434 aaPredicted RBP13.41□□□□□ -0.26
ATG3-209ENST00000496423 PANK1Q8TE04 598 aa13.41□□□□□ -0.26
ATG3-209ENST00000496423 GPRASP2Q96D09 838 aa13.41□□□□□ -0.26
ATG3-209ENST00000496423 WDR6Q9NNW5 1121 aaKnown RBP13.41□□□□□ -0.26
ATG3-209ENST00000496423 HELLSQ9NRZ9 838 aa13.41□□□□□ -0.26
ATG3-209ENST00000496423 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.41□□□□□ -0.26
ATG3-209ENST00000496423 NT5C1B-RDH14C9J2C7 533 aa13.4□□□□□ -0.26
ATG3-209ENST00000496423 KLRF2D3W0D1 207 aa13.4□□□□□ -0.26
ATG3-209ENST00000496423 FOXP2O15409 715 aa13.4□□□□□ -0.26
ATG3-209ENST00000496423 MAFGO15525 162 aa13.4□□□□□ -0.26
ATG3-209ENST00000496423 GLULP15104 373 aa13.4□□□□□ -0.26
ATG3-209ENST00000496423 CRYBB1P53674 252 aaPredicted RBP13.4□□□□□ -0.26
ATG3-209ENST00000496423 GSE1Q14687 1217 aa13.4□□□□□ -0.26
ATG3-209ENST00000496423 ZBTB41Q5SVQ8 909 aa13.4□□□□□ -0.26
ATG3-209ENST00000496423 MTHFD1LQ6UB35 978 aa13.4□□□□□ -0.26
ATG3-209ENST00000496423 RNF169Q8NCN4 708 aa13.4□□□□□ -0.26
ATG3-209ENST00000496423 SMARCC2Q8TAQ2 1214 aa13.4□□□□□ -0.26
ATG3-209ENST00000496423 RHOBTB2Q9BYZ6 727 aa13.4□□□□□ -0.26
ATG3-209ENST00000496423 PIDD1Q9HB75 910 aa13.4□□□□□ -0.26
ATG3-209ENST00000496423 PARD6AQ9NPB6 346 aa13.4□□□□□ -0.26
ATG3-209ENST00000496423 ZBTB40Q9NUA8 1239 aa13.4□□□□□ -0.26
ATG3-209ENST00000496423 ZMIZ1Q9ULJ6 1067 aa13.4□□□□□ -0.26
ATG3-209ENST00000496423 ZFP37Q9Y6Q3 630 aaPredicted RBP13.4□□□□□ -0.26
ATG3-209ENST00000496423 C2orf16Q68DN1 1984 aa13.4□□□□□ -0.27
ATG3-209ENST00000496423 CLUHO75153 1309 aa13.39□□□□□ -0.27
ATG3-209ENST00000496423 FRMPD4Q14CM0 1322 aa13.39□□□□□ -0.27
ATG3-209ENST00000496423 PATJQ8NI35 1801 aa13.39□□□□□ -0.27
ATG3-209ENST00000496423 CCDC195A0A1B0GUA6 201 aa13.39□□□□□ -0.27
ATG3-209ENST00000496423 FAM170BA6NMN3 283 aa13.39□□□□□ -0.27
ATG3-209ENST00000496423 KLRC1P26715 233 aa13.39□□□□□ -0.27
ATG3-209ENST00000496423 SLC26A2P50443 739 aa13.39□□□□□ -0.27
ATG3-209ENST00000496423 HAND2P61296 217 aa13.39□□□□□ -0.27
ATG3-209ENST00000496423 PLCB4Q15147 1175 aa13.39□□□□□ -0.27
ATG3-209ENST00000496423 CSRP2Q16527 193 aa13.39□□□□□ -0.27
ATG3-209ENST00000496423 N4BP2L1Q5TBK1 243 aaPredicted RBP13.39□□□□□ -0.27
ATG3-209ENST00000496423 VPS53Q5VIR6 699 aa13.39□□□□□ -0.27
ATG3-209ENST00000496423 TSHZ3Q63HK5 1081 aa13.39□□□□□ -0.27
ATG3-209ENST00000496423 PLPPR4Q7Z2D5 763 aa13.39□□□□□ -0.27
ATG3-209ENST00000496423 HOMER1Q86YM7 354 aa13.39□□□□□ -0.27
ATG3-209ENST00000496423 AUTS2Q8WXX7 1259 aa13.39□□□□□ -0.27
ATG3-209ENST00000496423 NELL1Q92832 810 aa13.39□□□□□ -0.27
ATG3-209ENST00000496423 ZBTB10Q96DT7 871 aa13.39□□□□□ -0.27
ATG3-209ENST00000496423 ZSCAN10Q96SZ4 725 aaPredicted RBP13.39□□□□□ -0.27
ATG3-209ENST00000496423 MYL10Q9BUA6 226 aa13.39□□□□□ -0.27
ATG3-209ENST00000496423 SEMA4GQ9NTN9 838 aa13.39□□□□□ -0.27
ATG3-209ENST00000496423 SSX2IPQ9Y2D8 614 aa13.39□□□□□ -0.27
ATG3-209ENST00000496423 TELO2Q9Y4R8 837 aa13.39□□□□□ -0.27
ATG3-209ENST00000496423 ZMYM6O95789 1325 aa13.39□□□□□ -0.27
ATG3-209ENST00000496423 LRRN2O75325 713 aa13.38□□□□□ -0.27
ATG3-209ENST00000496423 LAMP2P13473 410 aa13.38□□□□□ -0.27
ATG3-209ENST00000496423 STAT5BP51692 787 aa13.38□□□□□ -0.27
ATG3-209ENST00000496423 CLCN4P51793 760 aa13.38□□□□□ -0.27
ATG3-209ENST00000496423 PFKPQ01813 784 aa13.38□□□□□ -0.27
ATG3-209ENST00000496423 PRR23CQ6ZRP0 262 aa13.38□□□□□ -0.27
ATG3-209ENST00000496423 ECHDC2Q86YB7 292 aa13.38□□□□□ -0.27
ATG3-209ENST00000496423 PHKBQ93100 1093 aa13.38□□□□□ -0.27
ATG3-209ENST00000496423 MTMR8Q96EF0 704 aa13.38□□□□□ -0.27
ATG3-209ENST00000496423 FAM212AQ96EL1 285 aa13.38□□□□□ -0.27
ATG3-209ENST00000496423 KLHL5Q96PQ7 755 aa13.38□□□□□ -0.27
ATG3-209ENST00000496423 RALGAPA1Q6GYQ0 2036 aa13.38□□□□□ -0.27
ATG3-209ENST00000496423 ANKRD11Q6UB99 2663 aaPredicted RBP13.38□□□□□ -0.27
ATG3-209ENST00000496423 TMEM8BA6NDV4 472 aa13.37□□□□□ -0.27
ATG3-209ENST00000496423 ZNF213O14771 459 aa13.37□□□□□ -0.27
ATG3-209ENST00000496423 N4BP1O75113 896 aaKnown RBP13.37□□□□□ -0.27
ATG3-209ENST00000496423 ZC3H11AO75152 810 aaKnown RBP eCLIP13.37□□□□□ -0.27
ATG3-209ENST00000496423 KCNA2P16389 499 aa13.37□□□□□ -0.27
ATG3-209ENST00000496423 SNW1Q13573 536 aaKnown RBP13.37□□□□□ -0.27
ATG3-209ENST00000496423 DSC3Q14574 896 aa13.37□□□□□ -0.27
ATG3-209ENST00000496423 MLF2Q15773 248 aaPredicted RBP13.37□□□□□ -0.27
ATG3-209ENST00000496423 SLC44A4Q53GD3 710 aa13.37□□□□□ -0.27
ATG3-209ENST00000496423 LRSAM1Q6UWE0 723 aa13.37□□□□□ -0.27
ATG3-209ENST00000496423 ZNF710Q8N1W2 664 aa13.37□□□□□ -0.27
ATG3-209ENST00000496423 HELQQ8TDG4 1101 aa13.37□□□□□ -0.27
ATG3-209ENST00000496423 TRAPPC12Q8WVT3 735 aa13.37□□□□□ -0.27
ATG3-209ENST00000496423 BBXQ8WY36 941 aaPredicted RBP13.37□□□□□ -0.27
ATG3-209ENST00000496423 SMG7Q92540 1137 aaKnown RBP13.37□□□□□ -0.27
ATG3-209ENST00000496423 IGSF21Q96ID5 467 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms