RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 POTEDQ86YR6 584 aa8.1□□□□□ -1.11
VPS52-221ENST00000495755 ZNF579Q8NAF0 562 aaKnown RBP8.1□□□□□ -1.11
VPS52-221ENST00000495755 IL27Q8NEV9 243 aa8.1□□□□□ -1.11
VPS52-221ENST00000495755 P2RX5Q93086 422 aa8.1□□□□□ -1.11
VPS52-221ENST00000495755 ZNF668Q96K58 619 aaPredicted RBP8.1□□□□□ -1.11
VPS52-221ENST00000495755 NECAB3Q96P71 396 aaPredicted RBP8.1□□□□□ -1.11
VPS52-221ENST00000495755 SH2D3AQ9BRG2 576 aa8.1□□□□□ -1.11
VPS52-221ENST00000495755 NSUN3Q9H649 340 aaKnown RBP8.1□□□□□ -1.11
VPS52-221ENST00000495755 ELAC1Q9H777 363 aaKnown RBP8.1□□□□□ -1.11
VPS52-221ENST00000495755 UBE2ZQ9H832 354 aaPredicted RBP8.1□□□□□ -1.11
VPS52-221ENST00000495755 BRMS1Q9HCU9 246 aa8.1□□□□□ -1.11
VPS52-221ENST00000495755 CYP26B1Q9NR63 512 aa8.1□□□□□ -1.11
VPS52-221ENST00000495755 TMEM161AQ9NX61 479 aa8.1□□□□□ -1.11
VPS52-221ENST00000495755 WRAP73Q9P2S5 460 aaPredicted RBP8.1□□□□□ -1.11
VPS52-221ENST00000495755 LRFN2Q9ULH4 789 aa8.1□□□□□ -1.11
VPS52-221ENST00000495755 LIMCH1Q9UPQ0 1083 aa8.1□□□□□ -1.11
VPS52-221ENST00000495755 RALGAPA2Q2PPJ7 1873 aa8.1□□□□□ -1.11
VPS52-221ENST00000495755 NLRC5Q86WI3 1866 aa8.09□□□□□ -1.11
VPS52-221ENST00000495755 WNT7AO00755 349 aa8.09□□□□□ -1.11
VPS52-221ENST00000495755 DKC1O60832 514 aaKnown RBP eCLIP8.09□□□□□ -1.11
VPS52-221ENST00000495755 CSDE1O75534 798 aaKnown RBP8.09□□□□□ -1.11
VPS52-221ENST00000495755 BAG4O95429 457 aaKnown RBP8.09□□□□□ -1.11
VPS52-221ENST00000495755 ITGB1P05556 798 aa8.09□□□□□ -1.11
VPS52-221ENST00000495755 DNAJB1P25685 340 aa8.09□□□□□ -1.11
VPS52-221ENST00000495755 DNM2P50570 870 aa8.09□□□□□ -1.11
VPS52-221ENST00000495755 NPEPPSP55786 919 aa8.09□□□□□ -1.11
VPS52-221ENST00000495755 TRIM29Q14134 588 aa8.09□□□□□ -1.11
VPS52-221ENST00000495755 CTC1Q2NKJ3 1217 aa8.09□□□□□ -1.11
VPS52-221ENST00000495755 PLA2G4FQ68DD2 849 aa8.09□□□□□ -1.11
VPS52-221ENST00000495755 NCAPH2Q6IBW4 605 aa8.09□□□□□ -1.11
VPS52-221ENST00000495755 C4orf19Q8IY42 314 aa8.09□□□□□ -1.11
VPS52-221ENST00000495755 DIS3L2Q8IYB7 885 aaKnown RBP8.09□□□□□ -1.11
VPS52-221ENST00000495755 SLFN12Q8IYM2 578 aa8.09□□□□□ -1.11
VPS52-221ENST00000495755 KLHL23Q8NBE8 558 aa8.09□□□□□ -1.11
VPS52-221ENST00000495755 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.09□□□□□ -1.11
VPS52-221ENST00000495755 SPPL3Q8TCT6 385 aa8.09□□□□□ -1.11
VPS52-221ENST00000495755 NEK9Q8TD19 979 aa8.09□□□□□ -1.11
VPS52-221ENST00000495755 NLRP7Q8WX94 980 aa8.09□□□□□ -1.11
VPS52-221ENST00000495755 PABPC5Q96DU9 382 aaKnown RBP8.09□□□□□ -1.11
VPS52-221ENST00000495755 MTMR9Q96QG7 549 aa8.09□□□□□ -1.11
VPS52-221ENST00000495755 LLPHQ9BRT6 129 aaKnown RBP8.09□□□□□ -1.11
VPS52-221ENST00000495755 GCOM2Q9BZD3 368 aaPredicted RBP8.09□□□□□ -1.11
VPS52-221ENST00000495755 ATP6V0A4Q9HBG4 840 aa8.09□□□□□ -1.11
VPS52-221ENST00000495755 ALG13Q9NP73 1137 aaKnown RBP8.09□□□□□ -1.11
VPS52-221ENST00000495755 RNF19AQ9NV58 838 aa8.09□□□□□ -1.11
VPS52-221ENST00000495755 RGL1Q9NZL6 768 aa8.09□□□□□ -1.11
VPS52-221ENST00000495755 SUCLA2Q9P2R7 463 aaPredicted RBP8.09□□□□□ -1.11
VPS52-221ENST00000495755 PPME1Q9Y570 386 aa8.09□□□□□ -1.11
VPS52-221ENST00000495755 BRWD1Q9NSI6 2320 aa8.09□□□□□ -1.11
VPS52-221ENST00000495755 A0A087WZ62 844 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 A0A0U1RQF3 1178 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 TBKBP1A7MCY6 615 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 NCK2O43639 380 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 MARCH6O60337 910 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 SLITRK3O94933 977 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 LYPLA2O95372 231 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 FGFR1P11362 822 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 ZSCAN20P17040 1043 aaPredicted RBP8.08□□□□□ -1.12
VPS52-221ENST00000495755 IBSPP21815 317 aaPredicted RBP8.08□□□□□ -1.12
VPS52-221ENST00000495755 FGFR4P22455 802 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 KCNA5P22460 613 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 LTBRP36941 435 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 RFC5P40937 340 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 RBM25P49756 843 aaKnown RBP8.08□□□□□ -1.12
VPS52-221ENST00000495755 HYAL1Q12794 435 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 CALCRLQ16602 461 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 LRRC55Q6ZSA7 311 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 ZNF598Q86UK7 904 aaKnown RBP8.08□□□□□ -1.12
VPS52-221ENST00000495755 ZNF410Q86VK4 478 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 ECHDC2Q86YB7 292 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 KSR1Q8IVT5 923 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 CCDC83Q8IWF9 413 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 EXOC8Q8IYI6 725 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 SLC7A3Q8WY07 619 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 DYDC2Q96IM9 177 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 CEP170P1Q96L14 293 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 ZSCAN31Q96LW9 406 aaPredicted RBP8.08□□□□□ -1.12
VPS52-221ENST00000495755 CASD1Q96PB1 797 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 HSD17B14Q9BPX1 270 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 JPH2Q9BR39 696 aaPredicted RBP8.08□□□□□ -1.12
VPS52-221ENST00000495755 FDXACB1Q9BRP7 624 aaPredicted RBP8.08□□□□□ -1.12
VPS52-221ENST00000495755 LXNQ9BS40 222 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 TRAIPQ9BWF2 469 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 TMEM117Q9H0C3 514 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 DHX33Q9H6R0 707 aaKnown RBP8.08□□□□□ -1.12
VPS52-221ENST00000495755 CWH43Q9H720 699 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 ZSWIM4Q9H7M6 989 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 CHST12Q9NRB3 414 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 TYW1Q9NV66 732 aaKnown RBP8.08□□□□□ -1.12
VPS52-221ENST00000495755 PCDHA12Q9UN75 941 aa8.08□□□□□ -1.12
VPS52-221ENST00000495755 TCF20Q9UGU0 1960 aaKnown RBP8.08□□□□□ -1.12
VPS52-221ENST00000495755 MYO7AQ13402 2215 aa8.07□□□□□ -1.12
VPS52-221ENST00000495755 GRXCR2A6NFK2 248 aa8.07□□□□□ -1.12
VPS52-221ENST00000495755 H3BQ06 376 aaPredicted RBP8.07□□□□□ -1.12
VPS52-221ENST00000495755 ZBTB39O15060 712 aa8.07□□□□□ -1.12
VPS52-221ENST00000495755 HOXA2O43364 376 aa8.07□□□□□ -1.12
VPS52-221ENST00000495755 NEMFO60524 1076 aa8.07□□□□□ -1.12
VPS52-221ENST00000495755 EOMESO95936 686 aa8.07□□□□□ -1.12
VPS52-221ENST00000495755 ATF7P17544 494 aaPredicted RBP8.07□□□□□ -1.12
VPS52-221ENST00000495755 YWHABP31946 246 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms