RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 PCDHA7Q9UN72 937 aa12.38□□□□□ -0.43
APTX-230ENST00000494649 ARID2Q68CP9 1835 aa12.38□□□□□ -0.43
APTX-230ENST00000494649 A0A087WZ62 844 aa12.38□□□□□ -0.43
APTX-230ENST00000494649 A0A087X0B3 334 aa12.38□□□□□ -0.43
APTX-230ENST00000494649 IGKV6-21A0A0C4DH24 114 aa12.38□□□□□ -0.43
APTX-230ENST00000494649 NPHP3-ACAD11A0A0J9YXS1 232 aa12.38□□□□□ -0.43
APTX-230ENST00000494649 GPR32O75388 356 aa12.38□□□□□ -0.43
APTX-230ENST00000494649 FGBP02675 491 aa12.38□□□□□ -0.43
APTX-230ENST00000494649 DNM2P50570 870 aa12.38□□□□□ -0.43
APTX-230ENST00000494649 FBXO47Q5MNV8 452 aa12.38□□□□□ -0.43
APTX-230ENST00000494649 FAM109BQ6ICB4 259 aaPredicted RBP12.38□□□□□ -0.43
APTX-230ENST00000494649 SHC4Q6S5L8 630 aa12.38□□□□□ -0.43
APTX-230ENST00000494649 TDHQ8IZJ6 230 aa12.38□□□□□ -0.43
APTX-230ENST00000494649 LEO1Q8WVC0 666 aaPredicted RBP12.38□□□□□ -0.43
APTX-230ENST00000494649 FDXACB1Q9BRP7 624 aaPredicted RBP12.38□□□□□ -0.43
APTX-230ENST00000494649 RUSC1Q9BVN2 902 aa12.38□□□□□ -0.43
APTX-230ENST00000494649 KDM3AQ9Y4C1 1321 aa12.37□□□□□ -0.43
APTX-230ENST00000494649 GRXCR1A8MXD5 290 aa12.37□□□□□ -0.43
APTX-230ENST00000494649 PPP6R2O75170 966 aa12.37□□□□□ -0.43
APTX-230ENST00000494649 DGAT1O75907 488 aa12.37□□□□□ -0.43
APTX-230ENST00000494649 RFC5P40937 340 aa12.37□□□□□ -0.43
APTX-230ENST00000494649 GPC3P51654 580 aa12.37□□□□□ -0.43
APTX-230ENST00000494649 MCM6Q14566 821 aa12.37□□□□□ -0.43
APTX-230ENST00000494649 RPUSD2Q8IZ73 545 aaKnown RBP12.37□□□□□ -0.43
APTX-230ENST00000494649 ASAP3Q8TDY4 903 aa12.37□□□□□ -0.43
APTX-230ENST00000494649 POLR3FQ9H1D9 316 aaPredicted RBP12.37□□□□□ -0.43
APTX-230ENST00000494649 PRO3102Q9H379 93 aa12.37□□□□□ -0.43
APTX-230ENST00000494649 DBR1Q9UK59 544 aaKnown RBP12.37□□□□□ -0.43
APTX-230ENST00000494649 NOC2LQ9Y3T9 749 aaKnown RBP12.37□□□□□ -0.43
APTX-230ENST00000494649 ATP6V1DQ9Y5K8 247 aa12.37□□□□□ -0.43
APTX-230ENST00000494649 LOXHD1Q8IVV2 1947 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 SFI1A8K8P3 1242 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 EYA4O95677 639 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 LAMTOR4Q0VGL1 99 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 TMEM119Q4V9L6 283 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 FAM26DQ5JW98 314 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 FAM117BQ6P1L5 589 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 RPAINQ86UA6 219 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 NME8Q8N427 588 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 RNF149Q8NC42 400 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 KCNG4Q8TDN1 519 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 PSPC1Q8WXF1 523 aaKnown RBP12.36□□□□□ -0.43
APTX-230ENST00000494649 STAMQ92783 540 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 NT5C3AQ9H0P0 336 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 ADAMTS10Q9H324 1103 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 COL4A3BPQ9Y5P4 624 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 TCHHQ07283 1943 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 CAND2O75155 1236 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 RPS6KA5O75582 802 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 PLA2G4BP0C869 781 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 LIG1P18858 919 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 HABP4Q5JVS0 413 aaKnown RBP12.36□□□□□ -0.43
APTX-230ENST00000494649 AXDND1Q5T1B0 1012 aaPredicted RBP12.36□□□□□ -0.43
APTX-230ENST00000494649 PSRC1Q6PGN9 363 aaPredicted RBP12.36□□□□□ -0.43
APTX-230ENST00000494649 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.36□□□□□ -0.43
APTX-230ENST00000494649 BSNDQ8WZ55 320 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 KIFC3Q9BVG8 833 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 BLOC1S4Q9NUP1 217 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 PADI3Q9ULW8 664 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 STK24Q9Y6E0 443 aa12.36□□□□□ -0.43
APTX-230ENST00000494649 CXCL10P02778 98 aa12.35□□□□□ -0.43
APTX-230ENST00000494649 XRCC6P12956 609 aaKnown RBP eCLIP12.35□□□□□ -0.43
APTX-230ENST00000494649 GLRA2P23416 452 aa12.35□□□□□ -0.43
APTX-230ENST00000494649 BMP8BP34820 402 aa12.35□□□□□ -0.43
APTX-230ENST00000494649 RFC2P35250 354 aa12.35□□□□□ -0.43
APTX-230ENST00000494649 TXLNAP40222 546 aa12.35□□□□□ -0.43
APTX-230ENST00000494649 DEFB103AP81534 67 aa12.35□□□□□ -0.43
APTX-230ENST00000494649 PAK2Q13177 524 aa12.35□□□□□ -0.43
APTX-230ENST00000494649 PLEKHG4Q58EX7 1191 aa12.35□□□□□ -0.43
APTX-230ENST00000494649 HYIQ5T013 277 aa12.35□□□□□ -0.43
APTX-230ENST00000494649 RRAGBQ5VZM2 374 aa12.35□□□□□ -0.43
APTX-230ENST00000494649 RINT1Q6NUQ1 792 aa12.35□□□□□ -0.43
APTX-230ENST00000494649 TSHZ1Q6ZSZ6 1077 aa12.35□□□□□ -0.43
APTX-230ENST00000494649 FAM228AQ86W67 206 aa12.35□□□□□ -0.43
APTX-230ENST00000494649 IPO9Q96P70 1041 aaKnown RBP12.35□□□□□ -0.43
APTX-230ENST00000494649 JPH2Q9BR39 696 aaPredicted RBP12.35□□□□□ -0.43
APTX-230ENST00000494649 CCSER1Q9C0I3 900 aa12.35□□□□□ -0.43
APTX-230ENST00000494649 RCOR1Q9UKL0 485 aa12.35□□□□□ -0.43
APTX-230ENST00000494649 LRRIQ4A6NIV6 560 aa12.34□□□□□ -0.43
APTX-230ENST00000494649 CUTAO60888 179 aa12.34□□□□□ -0.43
APTX-230ENST00000494649 UPP2O95045 317 aa12.34□□□□□ -0.43
APTX-230ENST00000494649 CRYBB1P53674 252 aaPredicted RBP12.34□□□□□ -0.43
APTX-230ENST00000494649 SLC12A3P55017 1021 aa12.34□□□□□ -0.43
APTX-230ENST00000494649 CAPSQ13938 189 aa12.34□□□□□ -0.43
APTX-230ENST00000494649 ATL3Q6DD88 541 aa12.34□□□□□ -0.43
APTX-230ENST00000494649 CNKSR3Q6P9H4 555 aa12.34□□□□□ -0.43
APTX-230ENST00000494649 MYOCDQ8IZQ8 938 aa12.34□□□□□ -0.43
APTX-230ENST00000494649 SEPT8Q92599 483 aa12.34□□□□□ -0.43
APTX-230ENST00000494649 RAD54LQ92698 747 aa12.34□□□□□ -0.43
APTX-230ENST00000494649 DHX58Q96C10 678 aa12.34□□□□□ -0.43
APTX-230ENST00000494649 MINDY3Q9H8M7 445 aa12.34□□□□□ -0.43
APTX-230ENST00000494649 IFT122Q9HBG6 1241 aa12.34□□□□□ -0.43
APTX-230ENST00000494649 CCDC39Q9UFE4 941 aa12.34□□□□□ -0.43
APTX-230ENST00000494649 ST3GAL5Q9UNP4 418 aa12.34□□□□□ -0.43
APTX-230ENST00000494649 USP20Q9Y2K6 914 aa12.34□□□□□ -0.43
APTX-230ENST00000494649 A0A1B0GVL5 298 aa12.34□□□□□ -0.43
APTX-230ENST00000494649 HIP1RO75146 1068 aa12.34□□□□□ -0.43
APTX-230ENST00000494649 CYP11B2P19099 503 aa12.34□□□□□ -0.43
APTX-230ENST00000494649 MUTP22033 750 aa12.34□□□□□ -0.43
APTX-230ENST00000494649 EIF4BP23588 611 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms