RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 MAP7D2Q96T17 732 aa14.29□□□□□ -0.12
SKA1-205ENST00000494518 ENTPD7Q9NQZ7 604 aa14.29□□□□□ -0.12
SKA1-205ENST00000494518 DISC1Q9NRI5 854 aa14.29□□□□□ -0.12
SKA1-205ENST00000494518 RNF19AQ9NV58 838 aa14.29□□□□□ -0.12
SKA1-205ENST00000494518 CEP131Q9UPN4 1083 aa14.29□□□□□ -0.12
SKA1-205ENST00000494518 NID2Q14112 1375 aa14.29□□□□□ -0.12
SKA1-205ENST00000494518 TMEM150BA6NC51 233 aa14.28□□□□□ -0.12
SKA1-205ENST00000494518 LAG3P18627 525 aa14.28□□□□□ -0.12
SKA1-205ENST00000494518 RPS6KB1P23443 525 aa14.28□□□□□ -0.12
SKA1-205ENST00000494518 CIITAP33076 1130 aa14.28□□□□□ -0.12
SKA1-205ENST00000494518 HSPA4P34932 840 aa14.28□□□□□ -0.12
SKA1-205ENST00000494518 FAM189BP81408 668 aa14.28□□□□□ -0.12
SKA1-205ENST00000494518 UBE3AQ05086 875 aa14.28□□□□□ -0.12
SKA1-205ENST00000494518 DUSP6Q16828 381 aa14.28□□□□□ -0.12
SKA1-205ENST00000494518 KMT2EQ8IZD2 1858 aa14.28□□□□□ -0.12
SKA1-205ENST00000494518 KCNB2Q92953 911 aa14.28□□□□□ -0.12
SKA1-205ENST00000494518 FAM167AQ96KS9 214 aa14.28□□□□□ -0.12
SKA1-205ENST00000494518 CASD1Q96PB1 797 aa14.28□□□□□ -0.12
SKA1-205ENST00000494518 TCF25Q9BQ70 676 aa14.28□□□□□ -0.12
SKA1-205ENST00000494518 SH2D3AQ9BRG2 576 aa14.28□□□□□ -0.12
SKA1-205ENST00000494518 LARP6Q9BRS8 491 aaKnown RBP14.28□□□□□ -0.12
SKA1-205ENST00000494518 ADAMTS10Q9H324 1103 aa14.28□□□□□ -0.12
SKA1-205ENST00000494518 UNC45AQ9H3U1 944 aa14.28□□□□□ -0.12
SKA1-205ENST00000494518 CDH22Q9UJ99 828 aa14.28□□□□□ -0.12
SKA1-205ENST00000494518 HIDE1A8MVS5 230 aa14.27□□□□□ -0.13
SKA1-205ENST00000494518 FSCN2O14926 492 aa14.27□□□□□ -0.13
SKA1-205ENST00000494518 MAGEB2O15479 319 aa14.27□□□□□ -0.13
SKA1-205ENST00000494518 GAS7O60861 476 aa14.27□□□□□ -0.13
SKA1-205ENST00000494518 ZSCAN20P17040 1043 aaPredicted RBP14.27□□□□□ -0.13
SKA1-205ENST00000494518 TMOD1P28289 359 aa14.27□□□□□ -0.13
SKA1-205ENST00000494518 TECP42680 631 aa14.27□□□□□ -0.13
SKA1-205ENST00000494518 NHLH1Q02575 133 aa14.27□□□□□ -0.13
SKA1-205ENST00000494518 DRP2Q13474 957 aa14.27□□□□□ -0.13
SKA1-205ENST00000494518 LRCH2Q5VUJ6 765 aa14.27□□□□□ -0.13
SKA1-205ENST00000494518 MCTP2Q6DN12 878 aa14.27□□□□□ -0.13
SKA1-205ENST00000494518 ECHDC2Q86YB7 292 aa14.27□□□□□ -0.13
SKA1-205ENST00000494518 ABI1Q8IZP0 508 aa14.27□□□□□ -0.13
SKA1-205ENST00000494518 LINC01465Q8N7H1 131 aa14.27□□□□□ -0.13
SKA1-205ENST00000494518 CCDC148Q8NFR7 591 aa14.27□□□□□ -0.13
SKA1-205ENST00000494518 BICD2Q8TD16 824 aa14.27□□□□□ -0.13
SKA1-205ENST00000494518 NLRP7Q8WX94 980 aa14.27□□□□□ -0.13
SKA1-205ENST00000494518 RNF26Q9BY78 433 aaPredicted RBP14.27□□□□□ -0.13
SKA1-205ENST00000494518 TMEM117Q9H0C3 514 aa14.27□□□□□ -0.13
SKA1-205ENST00000494518 SEPT9Q9UHD8 586 aaPredicted RBP14.27□□□□□ -0.13
SKA1-205ENST00000494518 CACNA1HO95180 2353 aa14.26□□□□□ -0.13
SKA1-205ENST00000494518 LOC730098B7Z3J9 87 aa14.26□□□□□ -0.13
SKA1-205ENST00000494518 TDP2O95551 362 aa14.26□□□□□ -0.13
SKA1-205ENST00000494518 EIF4BP23588 611 aaKnown RBP14.26□□□□□ -0.13
SKA1-205ENST00000494518 CA8P35219 290 aa14.26□□□□□ -0.13
SKA1-205ENST00000494518 GPC3P51654 580 aa14.26□□□□□ -0.13
SKA1-205ENST00000494518 NLRP5P59047 1200 aa14.26□□□□□ -0.13
SKA1-205ENST00000494518 TBC1D8BQ0IIM8 1120 aa14.26□□□□□ -0.13
SKA1-205ENST00000494518 LONRF3Q496Y0 759 aa14.26□□□□□ -0.13
SKA1-205ENST00000494518 MTERF2Q49AM1 385 aa14.26□□□□□ -0.13
SKA1-205ENST00000494518 CLLU1OSQ5K130 101 aa14.26□□□□□ -0.13
SKA1-205ENST00000494518 KCNT2Q6UVM3 1135 aa14.26□□□□□ -0.13
SKA1-205ENST00000494518 LRRC43Q8N309 656 aa14.26□□□□□ -0.13
SKA1-205ENST00000494518 HELQQ8TDG4 1101 aa14.26□□□□□ -0.13
SKA1-205ENST00000494518 TBCKQ8TEA7 893 aa14.26□□□□□ -0.13
SKA1-205ENST00000494518 MRPS27Q92552 414 aaKnown RBP14.26□□□□□ -0.13
SKA1-205ENST00000494518 EDAQ92838 391 aa14.26□□□□□ -0.13
SKA1-205ENST00000494518 SLC5A5Q92911 643 aa14.26□□□□□ -0.13
SKA1-205ENST00000494518 ZNF558Q96NG5 402 aa14.26□□□□□ -0.13
SKA1-205ENST00000494518 PHF7Q9BWX1 381 aaPredicted RBP14.26□□□□□ -0.13
SKA1-205ENST00000494518 TEKT3Q9BXF9 490 aa14.26□□□□□ -0.13
SKA1-205ENST00000494518 ELAC1Q9H777 363 aaKnown RBP14.26□□□□□ -0.13
SKA1-205ENST00000494518 NRBP2Q9NSY0 501 aa14.26□□□□□ -0.13
SKA1-205ENST00000494518 TMEM221A6NGB7 291 aa14.25□□□□□ -0.13
SKA1-205ENST00000494518 NT5C1B-RDH14C9J2C7 533 aa14.25□□□□□ -0.13
SKA1-205ENST00000494518 M0R296 226 aa14.25□□□□□ -0.13
SKA1-205ENST00000494518 DARSP14868 501 aaKnown RBP14.25□□□□□ -0.13
SKA1-205ENST00000494518 IFNAR1P17181 557 aa14.25□□□□□ -0.13
SKA1-205ENST00000494518 PDIA3P30101 505 aaKnown RBP14.25□□□□□ -0.13
SKA1-205ENST00000494518 MRE11P49959 708 aa14.25□□□□□ -0.13
SKA1-205ENST00000494518 TRIM67Q6ZTA4 783 aa14.25□□□□□ -0.13
SKA1-205ENST00000494518 MIER3Q7Z3K6 550 aa14.25□□□□□ -0.13
SKA1-205ENST00000494518 TMC7Q7Z402 723 aa14.25□□□□□ -0.13
SKA1-205ENST00000494518 MFSD14AQ96MC6 490 aa14.25□□□□□ -0.13
SKA1-205ENST00000494518 AGXT2Q9BYV1 514 aa14.25□□□□□ -0.13
SKA1-205ENST00000494518 HOXA2O43364 376 aa14.24□□□□□ -0.13
SKA1-205ENST00000494518 DTNBO60941 627 aa14.24□□□□□ -0.13
SKA1-205ENST00000494518 ATF7P17544 494 aaPredicted RBP14.24□□□□□ -0.13
SKA1-205ENST00000494518 JAK3P52333 1124 aa14.24□□□□□ -0.13
SKA1-205ENST00000494518 ZXDAP98168 799 aa14.24□□□□□ -0.13
SKA1-205ENST00000494518 PLCB3Q01970 1234 aa14.24□□□□□ -0.13
SKA1-205ENST00000494518 STK3Q13188 491 aa14.24□□□□□ -0.13
SKA1-205ENST00000494518 ANKRD54Q6NXT1 300 aa14.24□□□□□ -0.13
SKA1-205ENST00000494518 SUSD6Q92537 303 aa14.24□□□□□ -0.13
SKA1-205ENST00000494518 LPPQ93052 612 aa14.24□□□□□ -0.13
SKA1-205ENST00000494518 PBXIP1Q96AQ6 731 aa14.24□□□□□ -0.13
SKA1-205ENST00000494518 AIFM3Q96NN9 605 aa14.24□□□□□ -0.13
SKA1-205ENST00000494518 RIT2Q99578 217 aa14.24□□□□□ -0.13
SKA1-205ENST00000494518 CDCA3Q99618 268 aaPredicted RBP14.24□□□□□ -0.13
SKA1-205ENST00000494518 TSHZ2Q9NRE2 1034 aa14.24□□□□□ -0.13
SKA1-205ENST00000494518 PUF60Q9UHX1 559 aaKnown RBP14.24□□□□□ -0.13
SKA1-205ENST00000494518 ARID2Q68CP9 1835 aa14.23□□□□□ -0.13
SKA1-205ENST00000494518 A0A087WZ62 844 aa14.23□□□□□ -0.13
SKA1-205ENST00000494518 PSMD10O75832 226 aa14.23□□□□□ -0.13
SKA1-205ENST00000494518 PSMA5P28066 241 aa14.23□□□□□ -0.13
SKA1-205ENST00000494518 SFNP31947 248 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms