RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 CEP170P1Q96L14 293 aa18.13■□□□□ 0.49
ATG4B-225ENST00000494465 GANQ9H2C0 597 aa18.13■□□□□ 0.49
ATG4B-225ENST00000494465 UNCXA6NJT0 531 aa18.12■□□□□ 0.49
ATG4B-225ENST00000494465 COPB2P35606 906 aa18.12■□□□□ 0.49
ATG4B-225ENST00000494465 DCAF17Q5H9S7 520 aaPredicted RBP18.12■□□□□ 0.49
ATG4B-225ENST00000494465 ZNF408Q9H9D4 720 aa18.12■□□□□ 0.49
ATG4B-225ENST00000494465 MAFBQ9Y5Q3 323 aaPredicted RBP18.12■□□□□ 0.49
ATG4B-225ENST00000494465 IGKV6D-21A0A0A0MT36 114 aa18.12■□□□□ 0.49
ATG4B-225ENST00000494465 TISP43B9A030 160 aa18.12■□□□□ 0.49
ATG4B-225ENST00000494465 CYP2J2P51589 502 aa18.12■□□□□ 0.49
ATG4B-225ENST00000494465 MYBPC2Q14324 1141 aa18.12■□□□□ 0.49
ATG4B-225ENST00000494465 SYCP3Q8IZU3 236 aa18.12■□□□□ 0.49
ATG4B-225ENST00000494465 BSNDQ8WZ55 320 aa18.12■□□□□ 0.49
ATG4B-225ENST00000494465 TMEM206Q9H813 350 aa18.12■□□□□ 0.49
ATG4B-225ENST00000494465 NLRC4Q9NPP4 1024 aa18.12■□□□□ 0.49
ATG4B-225ENST00000494465 EIF3CLB5ME19 914 aaKnown RBP18.11■□□□□ 0.49
ATG4B-225ENST00000494465 SLC16A4O15374 487 aa18.11■□□□□ 0.49
ATG4B-225ENST00000494465 FARP2O94887 1054 aaPredicted RBP18.11■□□□□ 0.49
ATG4B-225ENST00000494465 SOX10P56693 466 aa18.11■□□□□ 0.49
ATG4B-225ENST00000494465 MS4A4AQ96JQ5 239 aa18.11■□□□□ 0.49
ATG4B-225ENST00000494465 ACCSQ96QU6 501 aa18.11■□□□□ 0.49
ATG4B-225ENST00000494465 EIF3CQ99613 913 aaKnown RBP18.11■□□□□ 0.49
ATG4B-225ENST00000494465 XPNPEP1Q9NQW7 623 aa18.11■□□□□ 0.49
ATG4B-225ENST00000494465 CYP26B1Q9NR63 512 aa18.11■□□□□ 0.49
ATG4B-225ENST00000494465 SEPT9Q9UHD8 586 aaPredicted RBP18.11■□□□□ 0.49
ATG4B-225ENST00000494465 CYP2C8P10632 490 aa18.11■□□□□ 0.49
ATG4B-225ENST00000494465 SLC9A1P19634 815 aa18.11■□□□□ 0.49
ATG4B-225ENST00000494465 CYLC1P35663 651 aaPredicted RBP18.11■□□□□ 0.49
ATG4B-225ENST00000494465 NPTX2P47972 431 aa18.11■□□□□ 0.49
ATG4B-225ENST00000494465 POLR2FP61218 127 aaKnown RBP18.11■□□□□ 0.49
ATG4B-225ENST00000494465 ERVK-9P63128 1117 aa18.11■□□□□ 0.49
ATG4B-225ENST00000494465 CACNA2D4Q7Z3S7 1137 aa18.11■□□□□ 0.49
ATG4B-225ENST00000494465 C12orf56Q8IXR9 622 aa18.11■□□□□ 0.49
ATG4B-225ENST00000494465 TMEM161BQ8NDZ6 487 aa18.11■□□□□ 0.49
ATG4B-225ENST00000494465 PLCB1Q9NQ66 1216 aa18.11■□□□□ 0.49
ATG4B-225ENST00000494465 GSTTP1A0A1W2PQM5 241 aa18.1■□□□□ 0.49
ATG4B-225ENST00000494465 ZNF263O14978 683 aa18.1■□□□□ 0.49
ATG4B-225ENST00000494465 TLR2O60603 784 aa18.1■□□□□ 0.49
ATG4B-225ENST00000494465 PON1P27169 355 aa18.1■□□□□ 0.49
ATG4B-225ENST00000494465 XKR3Q5GH77 459 aa18.1■□□□□ 0.49
ATG4B-225ENST00000494465 TCERG1LQ5VWI1 586 aa18.1■□□□□ 0.49
ATG4B-225ENST00000494465 HGSNATQ68CP4 663 aa18.1■□□□□ 0.49
ATG4B-225ENST00000494465 MMP19Q99542 508 aa18.1■□□□□ 0.49
ATG4B-225ENST00000494465 NTPCRQ9BSD7 190 aaKnown RBP18.1■□□□□ 0.49
ATG4B-225ENST00000494465 DGAT1O75907 488 aa18.1■□□□□ 0.49
ATG4B-225ENST00000494465 TGFB3P10600 412 aa18.1■□□□□ 0.49
ATG4B-225ENST00000494465 ACTN1P12814 892 aa18.1■□□□□ 0.49
ATG4B-225ENST00000494465 ARHGAP29Q52LW3 1261 aa18.1■□□□□ 0.49
ATG4B-225ENST00000494465 ZNF662Q6ZS27 426 aa18.1■□□□□ 0.49
ATG4B-225ENST00000494465 SYN2Q92777 582 aaPredicted RBP18.1■□□□□ 0.49
ATG4B-225ENST00000494465 KIFAP3Q92845 792 aa18.1■□□□□ 0.49
ATG4B-225ENST00000494465 PCYT2Q99447 389 aa18.1■□□□□ 0.49
ATG4B-225ENST00000494465 PORCNQ9H237 461 aa18.1■□□□□ 0.49
ATG4B-225ENST00000494465 MROH8Q9H579 483 aa18.1■□□□□ 0.49
ATG4B-225ENST00000494465 ZNF302Q9NR11 478 aa18.1■□□□□ 0.49
ATG4B-225ENST00000494465 GTPBP10A4D1E9 387 aaKnown RBP18.09■□□□□ 0.49
ATG4B-225ENST00000494465 CASQ1P31415 396 aa18.09■□□□□ 0.49
ATG4B-225ENST00000494465 EXOC3L4Q17RC7 722 aa18.09■□□□□ 0.49
ATG4B-225ENST00000494465 EEPD1Q7L9B9 569 aa18.09■□□□□ 0.49
ATG4B-225ENST00000494465 SLC17A8Q8NDX2 589 aa18.09■□□□□ 0.49
ATG4B-225ENST00000494465 SPIRE2Q8WWL2 714 aa18.09■□□□□ 0.49
ATG4B-225ENST00000494465 CBWD1Q9BRT8 395 aa18.09■□□□□ 0.49
ATG4B-225ENST00000494465 KIFC3Q9BVG8 833 aa18.09■□□□□ 0.49
ATG4B-225ENST00000494465 C17orf75Q9HAS0 396 aa18.09■□□□□ 0.49
ATG4B-225ENST00000494465 SIX2Q9NPC8 291 aa18.09■□□□□ 0.49
ATG4B-225ENST00000494465 TRIM10Q9UDY6 481 aa18.09■□□□□ 0.49
ATG4B-225ENST00000494465 ZNF215Q9UL58 517 aaPredicted RBP18.09■□□□□ 0.49
ATG4B-225ENST00000494465 TFR2Q9UP52 801 aa18.09■□□□□ 0.49
ATG4B-225ENST00000494465 FRMD4BQ9Y2L6 1034 aa18.09■□□□□ 0.49
ATG4B-225ENST00000494465 RCCD1A6NED2 376 aa18.09■□□□□ 0.49
ATG4B-225ENST00000494465 KIF5CO60282 957 aa18.09■□□□□ 0.49
ATG4B-225ENST00000494465 ARIH2O95376 493 aa18.09■□□□□ 0.49
ATG4B-225ENST00000494465 LCA5LO95447 670 aa18.09■□□□□ 0.49
ATG4B-225ENST00000494465 EIF4A3P38919 411 aaKnown RBP18.09■□□□□ 0.49
ATG4B-225ENST00000494465 KRT83P78385 493 aa18.09■□□□□ 0.49
ATG4B-225ENST00000494465 KCTD2Q14681 263 aa18.09■□□□□ 0.49
ATG4B-225ENST00000494465 ASTE1Q2TB18 679 aaPredicted RBP18.09■□□□□ 0.49
ATG4B-225ENST00000494465 GPIHBP1Q8IV16 184 aa18.09■□□□□ 0.49
ATG4B-225ENST00000494465 MCPH1Q8NEM0 835 aa18.09■□□□□ 0.49
ATG4B-225ENST00000494465 SHCBP1Q8NEM2 672 aa18.09■□□□□ 0.49
ATG4B-225ENST00000494465 CCDC42Q96M95 316 aa18.09■□□□□ 0.49
ATG4B-225ENST00000494465 CEP89Q96ST8 783 aa18.09■□□□□ 0.49
ATG4B-225ENST00000494465 NUCKS1Q9H1E3 243 aaKnown RBP18.09■□□□□ 0.49
ATG4B-225ENST00000494465 CGNQ9P2M7 1197 aaKnown RBP18.09■□□□□ 0.49
ATG4B-225ENST00000494465 EXOC3O60645 756 aa18.08■□□□□ 0.48
ATG4B-225ENST00000494465 RTP1P59025 263 aa18.08■□□□□ 0.48
ATG4B-225ENST00000494465 DMP1Q13316 513 aaPredicted RBP18.08■□□□□ 0.48
ATG4B-225ENST00000494465 NEDD9Q14511 834 aa18.08■□□□□ 0.48
ATG4B-225ENST00000494465 PPP2R5AQ15172 486 aa18.08■□□□□ 0.48
ATG4B-225ENST00000494465 LY6KQ17RY6 165 aa18.08■□□□□ 0.48
ATG4B-225ENST00000494465 KLHDC7AQ5VTJ3 777 aa18.08■□□□□ 0.48
ATG4B-225ENST00000494465 PNMA3Q9UL41 463 aa18.08■□□□□ 0.48
ATG4B-225ENST00000494465 TBX20Q9UMR3 447 aa18.08■□□□□ 0.48
ATG4B-225ENST00000494465 ADGRA3Q8IWK6 1321 aa18.08■□□□□ 0.48
ATG4B-225ENST00000494465 PLXNA1Q9UIW2 1896 aa18.08■□□□□ 0.48
ATG4B-225ENST00000494465 CCDC169A6NNP5 214 aa18.08■□□□□ 0.48
ATG4B-225ENST00000494465 OATP04181 439 aa18.08■□□□□ 0.48
ATG4B-225ENST00000494465 CYP27A1Q02318 531 aa18.08■□□□□ 0.48
ATG4B-225ENST00000494465 MAPK8IP2Q13387 824 aaPredicted RBP18.08■□□□□ 0.48
ATG4B-225ENST00000494465 MORC4Q8TE76 937 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms