RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 CCDC112Q8NEF3 446 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 MCPH1Q8NEM0 835 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 ANKRD20A12PQ8NF67 263 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 GOLGA5Q8TBA6 731 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 SCFD2Q8WU76 684 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 KIFAP3Q92845 792 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 CCDC102AQ96A19 550 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 RNF166Q96A37 237 aaPredicted RBP7.49□□□□□ -1.21
MSH5-217ENST00000494458 HVCN1Q96D96 273 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 CCDC51Q96ER9 411 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 CNOT6LQ96LI5 555 aaKnown RBP7.49□□□□□ -1.21
MSH5-217ENST00000494458 TSG101Q99816 390 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 EDEM3Q9BZQ6 932 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 NDST4Q9H3R1 872 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 MRPL44Q9H9J2 332 aaKnown RBP7.49□□□□□ -1.21
MSH5-217ENST00000494458 CYP26B1Q9NR63 512 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 PKD2L1Q9P0L9 805 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 GJD2Q9UKL4 321 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 FAM184BQ9ULE4 1060 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 CAPN11Q9UMQ6 739 aa7.49□□□□□ -1.21
MSH5-217ENST00000494458 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.49□□□□□ -1.212e-11■□□□□ 11.2
MSH5-217ENST00000494458 WDR81Q562E7 1941 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 SFI1A8K8P3 1242 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 RNF225M0QZC1 329 aaPredicted RBP7.48□□□□□ -1.21
MSH5-217ENST00000494458 CETN3O15182 167 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 CALUO43852 315 aaPredicted RBP7.48□□□□□ -1.21
MSH5-217ENST00000494458 MAFO75444 373 aaPredicted RBP7.48□□□□□ -1.21
MSH5-217ENST00000494458 PRPF6O94906 941 aaKnown RBP7.48□□□□□ -1.21
MSH5-217ENST00000494458 GGPS1O95749 300 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 OATP04181 439 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 SKILP12757 684 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 SFPQP23246 707 aaKnown RBP eCLIP7.48□□□□□ -1.21
MSH5-217ENST00000494458 RPL13P26373 211 aaKnown RBP7.48□□□□□ -1.21
MSH5-217ENST00000494458 ABCD1P33897 745 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 ZNF157P51786 506 aaPredicted RBP7.48□□□□□ -1.21
MSH5-217ENST00000494458 CDK17Q00537 523 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 PRKCEQ02156 737 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 ARHGAP1Q07960 439 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 RBL2Q08999 1139 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 RAD51AP2Q09MP3 1159 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 KCNMA1Q12791 1236 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 ADAM9Q13443 819 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 LAMC2Q13753 1193 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 TTLL4Q14679 1199 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 NOLC1Q14978 699 aaKnown RBP eCLIP7.48□□□□□ -1.21
MSH5-217ENST00000494458 MEA1Q16626 185 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 LY6KQ17RY6 165 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 HSDL1Q3SXM5 330 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 XKR9Q5GH70 373 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 ODR4Q5SWX8 454 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 CEP135Q66GS9 1140 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 STXBP4Q6ZWJ1 553 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 ARMCX2Q7L311 632 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 PLEKHH3Q7Z736 793 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 MAP4K3Q8IVH8 894 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 FAM178BQ8IXR5 827 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 SMCR8Q8TEV9 937 aaPredicted RBP7.48□□□□□ -1.21
MSH5-217ENST00000494458 BBXQ8WY36 941 aaPredicted RBP7.48□□□□□ -1.21
MSH5-217ENST00000494458 MAML3Q96JK9 1138 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 FBXL18Q96ME1 805 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 DNAJC7Q99615 494 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 NUP58Q9BVL2 599 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 NAA15Q9BXJ9 866 aaKnown RBP7.48□□□□□ -1.21
MSH5-217ENST00000494458 CFHR5Q9BXR6 569 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 GBP3Q9H0R5 595 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 VPS16Q9H269 839 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 TMEM206Q9H813 350 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 METTL14Q9HCE5 456 aaKnown RBP7.48□□□□□ -1.21
MSH5-217ENST00000494458 ZNF302Q9NR11 478 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 TAB2Q9NYJ8 693 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 TBC1D7Q9P0N9 293 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 ARHGAP28Q9P2N2 729 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 TCEAL9Q9UHQ7 104 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 USP20Q9Y2K6 914 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 SAMM50Q9Y512 469 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 STYXL1Q9Y6J8 313 aa7.48□□□□□ -1.21
MSH5-217ENST00000494458 GTPBP10A4D1E9 387 aaKnown RBP7.47□□□□□ -1.21
MSH5-217ENST00000494458 TMEM150BA6NC51 233 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 AKR1B15C9JRZ8 316 aaPredicted RBP7.47□□□□□ -1.21
MSH5-217ENST00000494458 ARHGAP6O43182 974 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 GAS2O43903 313 aaKnown RBP7.47□□□□□ -1.21
MSH5-217ENST00000494458 MFAP3LO75121 409 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 AKAP3O75969 853 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 GCNT3O95395 438 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 PIGRP01833 764 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 NR3C1P04150 777 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 HOXB1P14653 301 aaPredicted RBP7.47□□□□□ -1.21
MSH5-217ENST00000494458 NR2F2P24468 414 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 MSNP26038 577 aaKnown RBP7.47□□□□□ -1.21
MSH5-217ENST00000494458 RFC5P40937 340 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 NPTX2P47972 431 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 FXR1P51114 621 aaKnown RBP eCLIP7.47□□□□□ -1.21
MSH5-217ENST00000494458 STAT5BP51692 787 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 NKX3-2P78367 333 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 UBXN1Q04323 297 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 POU5F1BQ06416 359 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 TBC1D8BQ0IIM8 1120 aa7.47□□□□□ -1.21
MSH5-217ENST00000494458 ZC2HC1CQ53FD0 456 aaPredicted RBP7.47□□□□□ -1.21
MSH5-217ENST00000494458 UTP14CQ5TAP6 766 aaKnown RBP7.47□□□□□ -1.21
MSH5-217ENST00000494458 E4F1Q66K89 784 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms