RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 ZHX1Q9UKY1 873 aaPredicted RBP9.46□□□□□ -0.9
RIF1-211ENST00000494333 FAM184BQ9ULE4 1060 aa9.46□□□□□ -0.9
RIF1-211ENST00000494333 NEDD4P46934 1319 aa9.46□□□□□ -0.9
RIF1-211ENST00000494333 SYNGAP1Q96PV0 1343 aa9.46□□□□□ -0.9
RIF1-211ENST00000494333 B4E1Z4 1266 aa9.45□□□□□ -0.9
RIF1-211ENST00000494333 ENC1O14682 589 aa9.45□□□□□ -0.9
RIF1-211ENST00000494333 ECEL1O95672 775 aa9.45□□□□□ -0.9
RIF1-211ENST00000494333 ICAM1P05362 532 aa9.45□□□□□ -0.9
RIF1-211ENST00000494333 CTSBP07858 339 aa9.45□□□□□ -0.9
RIF1-211ENST00000494333 NOS3P29474 1203 aa9.45□□□□□ -0.9
RIF1-211ENST00000494333 ADCYAP1R1P41586 468 aa9.45□□□□□ -0.9
RIF1-211ENST00000494333 ACVR2BQ13705 512 aa9.45□□□□□ -0.9
RIF1-211ENST00000494333 CCDC178Q5BJE1 867 aa9.45□□□□□ -0.9
RIF1-211ENST00000494333 MUM1L1Q5H9M0 696 aa9.45□□□□□ -0.9
RIF1-211ENST00000494333 SYDE2Q5VT97 1194 aa9.45□□□□□ -0.9
RIF1-211ENST00000494333 SLC39A5Q6ZMH5 540 aa9.45□□□□□ -0.9
RIF1-211ENST00000494333 RNF180Q86T96 592 aa9.45□□□□□ -0.9
RIF1-211ENST00000494333 CCDC144CPQ8IYA2 1237 aa9.45□□□□□ -0.9
RIF1-211ENST00000494333 RUFY2Q8WXA3 655 aa9.45□□□□□ -0.9
RIF1-211ENST00000494333 GDF15Q99988 308 aa9.45□□□□□ -0.9
RIF1-211ENST00000494333 ABHD16BQ9H3Z7 469 aa9.45□□□□□ -0.9
RIF1-211ENST00000494333 A1CFQ9NQ94 594 aaKnown RBP9.45□□□□□ -0.9
RIF1-211ENST00000494333 ZSWIM5Q9P217 1185 aa9.45□□□□□ -0.9
RIF1-211ENST00000494333 CCPG1Q9ULG6 757 aa9.45□□□□□ -0.9
RIF1-211ENST00000494333 PAGE1O75459 146 aa9.44□□□□□ -0.9
RIF1-211ENST00000494333 CELA3AP09093 270 aa9.44□□□□□ -0.9
RIF1-211ENST00000494333 GOLGA8HP0CJ92 632 aa9.44□□□□□ -0.9
RIF1-211ENST00000494333 SNHG28P0DPA3 235 aa9.44□□□□□ -0.9
RIF1-211ENST00000494333 CHMLP26374 656 aa9.44□□□□□ -0.9
RIF1-211ENST00000494333 BMP8BP34820 402 aa9.44□□□□□ -0.9
RIF1-211ENST00000494333 MAGEA10P43363 369 aaPredicted RBP9.44□□□□□ -0.9
RIF1-211ENST00000494333 NT5C2P49902 561 aa9.44□□□□□ -0.9
RIF1-211ENST00000494333 RTP1P59025 263 aa9.44□□□□□ -0.9
RIF1-211ENST00000494333 ZNF543Q08ER8 600 aa9.44□□□□□ -0.9
RIF1-211ENST00000494333 CCDC144BQ3MJ40 725 aa9.44□□□□□ -0.9
RIF1-211ENST00000494333 NSMFQ6X4W1 530 aa9.44□□□□□ -0.9
RIF1-211ENST00000494333 ARMCX2Q7L311 632 aa9.44□□□□□ -0.9
RIF1-211ENST00000494333 FAM133AQ8N9E0 248 aa9.44□□□□□ -0.9
RIF1-211ENST00000494333 STK35Q8TDR2 534 aa9.44□□□□□ -0.9
RIF1-211ENST00000494333 FGD4Q96M96 766 aa9.44□□□□□ -0.9
RIF1-211ENST00000494333 CORO1BQ9BR76 489 aa9.44□□□□□ -0.9
RIF1-211ENST00000494333 KRT23Q9C075 422 aa9.44□□□□□ -0.9
RIF1-211ENST00000494333 RANBP17Q9H2T7 1088 aaKnown RBP9.44□□□□□ -0.9
RIF1-211ENST00000494333 KAT14Q9H8E8 782 aa9.44□□□□□ -0.9
RIF1-211ENST00000494333 ATP11BQ9Y2G3 1177 aa9.44□□□□□ -0.9
RIF1-211ENST00000494333 ZNF236Q9UL36 1845 aa9.44□□□□□ -0.9
RIF1-211ENST00000494333 A0A1W2PPC1 479 aa9.43□□□□□ -0.9
RIF1-211ENST00000494333 ASB14A6NK59 587 aa9.43□□□□□ -0.9
RIF1-211ENST00000494333 ADAMTS4O75173 837 aa9.43□□□□□ -0.9
RIF1-211ENST00000494333 DUSP11O75319 330 aaKnown RBP9.43□□□□□ -0.9
RIF1-211ENST00000494333 NME2P22392 152 aa9.43□□□□□ -0.9
RIF1-211ENST00000494333 GATA4P43694 442 aa9.43□□□□□ -0.9
RIF1-211ENST00000494333 PTH1RQ03431 593 aa9.43□□□□□ -0.9
RIF1-211ENST00000494333 BAATQ14032 418 aaPredicted RBP9.43□□□□□ -0.9
RIF1-211ENST00000494333 GPATCH4Q5T3I0 446 aaKnown RBP9.43□□□□□ -0.9
RIF1-211ENST00000494333 SV2BQ7L1I2 683 aa9.43□□□□□ -0.9
RIF1-211ENST00000494333 SULF2Q8IWU5 870 aa9.43□□□□□ -0.9
RIF1-211ENST00000494333 ANKS1AQ92625 1134 aa9.43□□□□□ -0.9
RIF1-211ENST00000494333 RUSC1Q9BVN2 902 aa9.43□□□□□ -0.9
RIF1-211ENST00000494333 UBA5Q9GZZ9 404 aa9.43□□□□□ -0.9
RIF1-211ENST00000494333 CPVLQ9H3G5 476 aa9.43□□□□□ -0.9
RIF1-211ENST00000494333 CNNM2Q9H8M5 875 aa9.43□□□□□ -0.9
RIF1-211ENST00000494333 CYP39A1Q9NYL5 469 aa9.43□□□□□ -0.9
RIF1-211ENST00000494333 PRKAG2Q9UGJ0 569 aa9.43□□□□□ -0.9
RIF1-211ENST00000494333 MYH4Q9Y623 1939 aa9.43□□□□□ -0.9
RIF1-211ENST00000494333 COL11A1P12107 1806 aaPredicted RBP9.42□□□□□ -0.9
RIF1-211ENST00000494333 PARP14Q460N5 1801 aa9.42□□□□□ -0.9
RIF1-211ENST00000494333 TNKSO95271 1327 aa9.42□□□□□ -0.9
RIF1-211ENST00000494333 RAD50Q92878 1312 aa9.42□□□□□ -0.9
RIF1-211ENST00000494333 SYNRGQ9UMZ2 1314 aa9.42□□□□□ -0.9
RIF1-211ENST00000494333 PTPDC1A2A3K4 754 aa9.42□□□□□ -0.9
RIF1-211ENST00000494333 NFIBO00712 420 aa9.42□□□□□ -0.9
RIF1-211ENST00000494333 C6orf222P0C671 652 aaPredicted RBP9.42□□□□□ -0.9
RIF1-211ENST00000494333 ST13P50502 369 aaKnown RBP9.42□□□□□ -0.9
RIF1-211ENST00000494333 TRDNQ13061 729 aa9.42□□□□□ -0.9
RIF1-211ENST00000494333 CCDC85BQ15834 202 aaPredicted RBP9.42□□□□□ -0.9
RIF1-211ENST00000494333 KCNA10Q16322 511 aa9.42□□□□□ -0.9
RIF1-211ENST00000494333 TRIM60Q495X7 471 aa9.42□□□□□ -0.9
RIF1-211ENST00000494333 NOL8Q76FK4 1167 aaKnown RBP9.42□□□□□ -0.9
RIF1-211ENST00000494333 EEPD1Q7L9B9 569 aa9.42□□□□□ -0.9
RIF1-211ENST00000494333 ENAHQ8N8S7 591 aaPredicted RBP9.42□□□□□ -0.9
RIF1-211ENST00000494333 KLHDC9Q8NEP7 349 aa9.42□□□□□ -0.9
RIF1-211ENST00000494333 LBHD1Q9BQE6 289 aaPredicted RBP9.42□□□□□ -0.9
RIF1-211ENST00000494333 UBAC1Q9BSL1 405 aa9.42□□□□□ -0.9
RIF1-211ENST00000494333 SPC25Q9HBM1 224 aa9.42□□□□□ -0.9
RIF1-211ENST00000494333 PRDM5Q9NQX1 630 aaPredicted RBP9.42□□□□□ -0.9
RIF1-211ENST00000494333 PNMA2Q9UL42 364 aa9.42□□□□□ -0.9
RIF1-211ENST00000494333 DDX49Q9Y6V7 483 aaKnown RBP9.42□□□□□ -0.9
RIF1-211ENST00000494333 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.41□□□□□ -0.9
RIF1-211ENST00000494333 A0A1W2PQ45 241 aaPredicted RBP9.41□□□□□ -0.9
RIF1-211ENST00000494333 A0A1W2PQY0 241 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 MEGF11A6BM72 1044 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 MYADML2A6NDP7 307 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 SGSM2O43147 1006 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 ADCY6O43306 1168 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 CYP21A2P08686 494 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 GSTP1P09211 210 aaKnown RBP9.41□□□□□ -0.9
RIF1-211ENST00000494333 BMP6P22004 513 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 CALML3P27482 149 aa9.41□□□□□ -0.9
RIF1-211ENST00000494333 ARNTP27540 789 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms