RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 RFC5P40937 340 aa24.47■■□□□ 1.51
HPS3-207ENST00000494327 CDC42EP1Q00587 391 aa24.47■■□□□ 1.51
HPS3-207ENST00000494327 NPAS4Q8IUM7 802 aa24.47■■□□□ 1.51
HPS3-207ENST00000494327 KSR1Q8IVT5 923 aa24.47■■□□□ 1.51
HPS3-207ENST00000494327 EXOC8Q8IYI6 725 aa24.47■■□□□ 1.51
HPS3-207ENST00000494327 FIBCD1Q8N539 461 aa24.47■■□□□ 1.51
HPS3-207ENST00000494327 TMEM143Q96AN5 459 aa24.47■■□□□ 1.51
HPS3-207ENST00000494327 FDXACB1Q9BRP7 624 aaPredicted RBP24.47■■□□□ 1.51
HPS3-207ENST00000494327 GCOM2Q9BZD3 368 aaPredicted RBP24.47■■□□□ 1.51
HPS3-207ENST00000494327 PPME1Q9Y570 386 aa24.47■■□□□ 1.51
HPS3-207ENST00000494327 GTPBP6O43824 516 aaPredicted RBP24.46■■□□□ 1.51
HPS3-207ENST00000494327 GRB10Q13322 594 aa24.46■■□□□ 1.51
HPS3-207ENST00000494327 C4orf32Q8N8J7 132 aa24.46■■□□□ 1.51
HPS3-207ENST00000494327 PIGOQ8TEQ8 1089 aa24.46■■□□□ 1.51
HPS3-207ENST00000494327 GDPD5Q8WTR4 605 aa24.46■■□□□ 1.51
HPS3-207ENST00000494327 NLRP4Q96MN2 994 aa24.46■■□□□ 1.51
HPS3-207ENST00000494327 CCDC43Q96MW1 224 aaKnown RBP24.46■■□□□ 1.51
HPS3-207ENST00000494327 DHX33Q9H6R0 707 aaKnown RBP24.46■■□□□ 1.51
HPS3-207ENST00000494327 RGS18Q9NS28 235 aa24.46■■□□□ 1.51
HPS3-207ENST00000494327 LOXHD1Q8IVV2 1947 aa24.45■■□□□ 1.51
HPS3-207ENST00000494327 DGKIO75912 1065 aa24.45■■□□□ 1.5
HPS3-207ENST00000494327 LYPLA2O95372 231 aa24.45■■□□□ 1.5
HPS3-207ENST00000494327 SARSP49591 514 aaKnown RBP24.45■■□□□ 1.5
HPS3-207ENST00000494327 PTGDRQ13258 359 aa24.45■■□□□ 1.5
HPS3-207ENST00000494327 CUL4AQ13619 759 aa24.45■■□□□ 1.5
HPS3-207ENST00000494327 BTG3Q14201 252 aaPredicted RBP24.45■■□□□ 1.5
HPS3-207ENST00000494327 EMC2Q15006 297 aa24.45■■□□□ 1.5
HPS3-207ENST00000494327 FBXO22Q8NEZ5 403 aa24.45■■□□□ 1.5
HPS3-207ENST00000494327 ERMNQ8TAM6 284 aa24.45■■□□□ 1.5
HPS3-207ENST00000494327 C1orf112Q9NSG2 853 aa24.45■■□□□ 1.5
HPS3-207ENST00000494327 ANKEF1Q9NU02 776 aa24.45■■□□□ 1.5
HPS3-207ENST00000494327 PCDHB7Q9Y5E2 793 aa24.45■■□□□ 1.5
HPS3-207ENST00000494327 COL6A3P12111 3177 aa24.44■■□□□ 1.5
HPS3-207ENST00000494327 ADGRA3Q8IWK6 1321 aa24.44■■□□□ 1.5
HPS3-207ENST00000494327 MED24O75448 989 aa24.44■■□□□ 1.5
HPS3-207ENST00000494327 SPATA31C1P0DKV0 1188 aa24.44■■□□□ 1.5
HPS3-207ENST00000494327 ZSCAN20P17040 1043 aaPredicted RBP24.44■■□□□ 1.5
HPS3-207ENST00000494327 PAN2Q504Q3 1202 aaKnown RBP24.44■■□□□ 1.5
HPS3-207ENST00000494327 SLC24A5Q71RS6 500 aa24.44■■□□□ 1.5
HPS3-207ENST00000494327 CATSPER3Q86XQ3 398 aa24.44■■□□□ 1.5
HPS3-207ENST00000494327 PRPF31Q8WWY3 499 aaKnown RBP24.44■■□□□ 1.5
HPS3-207ENST00000494327 PSPC1Q8WXF1 523 aaKnown RBP24.44■■□□□ 1.5
HPS3-207ENST00000494327 ZNF689Q96CS4 500 aaPredicted RBP24.44■■□□□ 1.5
HPS3-207ENST00000494327 MTRQ99707 1265 aa24.44■■□□□ 1.5
HPS3-207ENST00000494327 TUFT1Q9NNX1 390 aa24.44■■□□□ 1.5
HPS3-207ENST00000494327 COL4A3BPQ9Y5P4 624 aa24.44■■□□□ 1.5
HPS3-207ENST00000494327 MTCH2Q9Y6C9 303 aa24.44■■□□□ 1.5
HPS3-207ENST00000494327 SRGAP2CP0DJJ0 459 aa24.43■■□□□ 1.5
HPS3-207ENST00000494327 DSC3Q14574 896 aa24.43■■□□□ 1.5
HPS3-207ENST00000494327 EPC2Q52LR7 807 aa24.43■■□□□ 1.5
HPS3-207ENST00000494327 RILPL1Q5EBL4 403 aa24.43■■□□□ 1.5
HPS3-207ENST00000494327 FAM43BQ6ZT52 329 aaPredicted RBP24.43■■□□□ 1.5
HPS3-207ENST00000494327 ZNF410Q86VK4 478 aa24.43■■□□□ 1.5
HPS3-207ENST00000494327 TMEM192Q8IY95 271 aa24.43■■□□□ 1.5
HPS3-207ENST00000494327 CRIPAKQ8N1N5 446 aa24.43■■□□□ 1.5
HPS3-207ENST00000494327 C9IYK1 514 aa24.42■■□□□ 1.5
HPS3-207ENST00000494327 LPXNO60711 386 aa24.42■■□□□ 1.5
HPS3-207ENST00000494327 GATMP50440 423 aa24.42■■□□□ 1.5
HPS3-207ENST00000494327 TCP11Q8WWU5 503 aa24.42■■□□□ 1.5
HPS3-207ENST00000494327 SAMD11Q96NU1 681 aa24.42■■□□□ 1.5
HPS3-207ENST00000494327 POLR3CQ9BUI4 534 aaPredicted RBP24.42■■□□□ 1.5
HPS3-207ENST00000494327 INO80BQ9C086 356 aaPredicted RBP24.42■■□□□ 1.5
HPS3-207ENST00000494327 RC3H2Q9HBD1 1191 aaKnown RBP24.42■■□□□ 1.5
HPS3-207ENST00000494327 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.42■■□□□ 1.5
HPS3-207ENST00000494327 FOXD4L1Q9NU39 408 aa24.42■■□□□ 1.5
HPS3-207ENST00000494327 LRWD1Q9UFC0 647 aa24.42■■□□□ 1.5
HPS3-207ENST00000494327 CDH23Q9H251 3354 aa24.42■■□□□ 1.5
HPS3-207ENST00000494327 GAS2O43903 313 aaKnown RBP24.41■■□□□ 1.5
HPS3-207ENST00000494327 RARRES1P49788 294 aa24.41■■□□□ 1.5
HPS3-207ENST00000494327 FXR2P51116 673 aaKnown RBP eCLIP24.41■■□□□ 1.5
HPS3-207ENST00000494327 LAMTOR4Q0VGL1 99 aa24.41■■□□□ 1.5
HPS3-207ENST00000494327 POTEGQ6S5H5 508 aa24.41■■□□□ 1.5
HPS3-207ENST00000494327 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.41■■□□□ 1.5
HPS3-207ENST00000494327 ATP6V0A4Q9HBG4 840 aa24.41■■□□□ 1.5
HPS3-207ENST00000494327 RNF216Q9NWF9 866 aaPredicted RBP24.41■■□□□ 1.5
HPS3-207ENST00000494327 DGAT1O75907 488 aa24.4■■□□□ 1.5
HPS3-207ENST00000494327 XRCC6P12956 609 aaKnown RBP eCLIP24.4■■□□□ 1.5
HPS3-207ENST00000494327 SFPQP23246 707 aaKnown RBP eCLIP24.4■■□□□ 1.5
HPS3-207ENST00000494327 RPA1P27694 616 aa24.4■■□□□ 1.5
HPS3-207ENST00000494327 CTNNB1P35222 781 aa24.4■■□□□ 1.5
HPS3-207ENST00000494327 CCT6AP40227 531 aaKnown RBP24.4■■□□□ 1.5
HPS3-207ENST00000494327 FAM102BQ5T8I3 360 aa24.4■■□□□ 1.5
HPS3-207ENST00000494327 NACC1Q96RE7 527 aa24.4■■□□□ 1.5
HPS3-207ENST00000494327 XPNPEP1Q9NQW7 623 aa24.4■■□□□ 1.5
HPS3-207ENST00000494327 PRDM6Q9NQX0 595 aa24.4■■□□□ 1.5
HPS3-207ENST00000494327 CHD7Q9P2D1 2997 aa24.4■■□□□ 1.5
HPS3-207ENST00000494327 MYO9BQ13459 2157 aa24.39■■□□□ 1.5
HPS3-207ENST00000494327 TTC3P53804 2025 aa24.39■■□□□ 1.5
HPS3-207ENST00000494327 VPS37CA5D8V6 355 aaPredicted RBP24.39■■□□□ 1.49
HPS3-207ENST00000494327 USO1O60763 962 aaKnown RBP24.39■■□□□ 1.49
HPS3-207ENST00000494327 POU3F3P20264 500 aaPredicted RBP24.39■■□□□ 1.49
HPS3-207ENST00000494327 FAM189BP81408 668 aa24.39■■□□□ 1.49
HPS3-207ENST00000494327 GPM6BQ13491 265 aa24.39■■□□□ 1.49
HPS3-207ENST00000494327 SKIV2LQ15477 1246 aaKnown RBP24.39■■□□□ 1.49
HPS3-207ENST00000494327 HAUS3Q68CZ6 603 aa24.39■■□□□ 1.49
HPS3-207ENST00000494327 MAEAQ7L5Y9 396 aa24.39■■□□□ 1.49
HPS3-207ENST00000494327 CATSPER4Q7RTX7 472 aa24.39■■□□□ 1.49
HPS3-207ENST00000494327 FERMT3Q86UX7 667 aa24.39■■□□□ 1.49
HPS3-207ENST00000494327 CMTR2Q8IYT2 770 aaKnown RBP24.39■■□□□ 1.49
HPS3-207ENST00000494327 RNF149Q8NC42 400 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms