RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 SKA2Q8WVK7 121 aaPredicted RBP12.56□□□□□ -0.4
COL25A1-204ENST00000494183 KLHL14Q9P2G3 628 aa12.56□□□□□ -0.4
COL25A1-204ENST00000494183 HUS1O60921 280 aa12.56□□□□□ -0.4
COL25A1-204ENST00000494183 FGGP02679 453 aa12.56□□□□□ -0.4
COL25A1-204ENST00000494183 FDPSP14324 419 aaKnown RBP12.56□□□□□ -0.4
COL25A1-204ENST00000494183 ATP11AP98196 1134 aa12.56□□□□□ -0.4
COL25A1-204ENST00000494183 SLC7A5Q01650 507 aa12.56□□□□□ -0.4
COL25A1-204ENST00000494183 TNFAIP2Q03169 654 aa12.56□□□□□ -0.4
COL25A1-204ENST00000494183 NFIAQ12857 509 aa12.56□□□□□ -0.4
COL25A1-204ENST00000494183 ZNF746Q6NUN9 644 aaPredicted RBP12.56□□□□□ -0.4
COL25A1-204ENST00000494183 C11orf70Q9BRQ4 267 aa12.56□□□□□ -0.4
COL25A1-204ENST00000494183 C2orf40Q9H1Z8 148 aa12.56□□□□□ -0.4
COL25A1-204ENST00000494183 ZWILCHQ9H900 591 aa12.56□□□□□ -0.4
COL25A1-204ENST00000494183 MED4Q9NPJ6 270 aa12.56□□□□□ -0.4
COL25A1-204ENST00000494183 GOLGA8KD6RF30 607 aa12.56□□□□□ -0.4
COL25A1-204ENST00000494183 ZRANB2O95218 330 aaKnown RBP eCLIP12.56□□□□□ -0.4
COL25A1-204ENST00000494183 PSMA2P25787 234 aa12.56□□□□□ -0.4
COL25A1-204ENST00000494183 YWHABP31946 246 aaKnown RBP12.56□□□□□ -0.4
COL25A1-204ENST00000494183 EPHB4P54760 987 aa12.56□□□□□ -0.4
COL25A1-204ENST00000494183 PPP4CP60510 307 aa12.56□□□□□ -0.4
COL25A1-204ENST00000494183 DRAP1Q14919 205 aaPredicted RBP12.56□□□□□ -0.4
COL25A1-204ENST00000494183 KRT39Q6A163 491 aa12.56□□□□□ -0.4
COL25A1-204ENST00000494183 PRMT6Q96LA8 375 aaPredicted RBP12.56□□□□□ -0.4
COL25A1-204ENST00000494183 TACC3Q9Y6A5 838 aa12.56□□□□□ -0.4
COL25A1-204ENST00000494183 PFDN6O15212 129 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 SLC4A1P02730 911 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 XPAP23025 273 aaPredicted RBP12.55□□□□□ -0.4
COL25A1-204ENST00000494183 TROAPQ12815 778 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 PLCB4Q15147 1175 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 TTC31Q49AM3 519 aaPredicted RBP12.55□□□□□ -0.4
COL25A1-204ENST00000494183 ZBED2Q9BTP6 218 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 MRPL4Q9BYD3 311 aaKnown RBP12.55□□□□□ -0.4
COL25A1-204ENST00000494183 JMJD4Q9H9V9 463 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 SMYD2Q9NRG4 433 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 SCINQ9Y6U3 715 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 ANKRD40Q6AI12 368 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 TOGARAM2Q6ZUX3 1019 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 CAPS2Q9BXY5 557 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 FBXO28Q9NVF7 368 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 AGO2Q9UKV8 859 aaKnown RBP12.55□□□□□ -0.4
COL25A1-204ENST00000494183 EIF3CLB5ME19 914 aaKnown RBP12.55□□□□□ -0.4
COL25A1-204ENST00000494183 ANXA13P27216 316 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 ARHGAP25P42331 645 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 GFPT1Q06210 699 aaPredicted RBP12.55□□□□□ -0.4
COL25A1-204ENST00000494183 BBS9Q3SYG4 887 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 SLC10A5Q5PT55 438 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 ARHGEF18Q6ZSZ5 1173 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 SCN4BQ8IWT1 228 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 EIF3CQ99613 913 aaKnown RBP12.55□□□□□ -0.4
COL25A1-204ENST00000494183 SLITRK6Q9H5Y7 841 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 RBAKQ9NYW8 714 aaPredicted RBP12.55□□□□□ -0.4
COL25A1-204ENST00000494183 PALMO75781 387 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 COPB2P35606 906 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 ECE1P42892 770 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 SLCO1A2P46721 670 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 CACNA2D3Q8IZS8 1091 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 DCLK2Q8N568 766 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 DDX23Q9BUQ8 820 aaKnown RBP12.55□□□□□ -0.4
COL25A1-204ENST00000494183 PARD6BQ9BYG5 372 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 POLIQ9UNA4 740 aa12.55□□□□□ -0.4
COL25A1-204ENST00000494183 NPHP3-ACAD11A0A0J9YXS1 232 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 GPC3P51654 580 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 CCDC144BQ3MJ40 725 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 NXNQ6DKJ4 435 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 TTC19Q6DKK2 380 aaPredicted RBP12.54□□□□□ -0.4
COL25A1-204ENST00000494183 ARHGAP24Q8N264 748 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 DNAJC17Q9NVM6 304 aaKnown RBP12.54□□□□□ -0.4
COL25A1-204ENST00000494183 EMSYQ7Z589 1322 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 PXDNLA1KZ92 1463 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 MEGF6O75095 1541 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 STXBP3O00186 592 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 LMBRD2Q68DH5 695 aaPredicted RBP12.54□□□□□ -0.4
COL25A1-204ENST00000494183 MCUQ8NE86 351 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 BEST2Q8NFU1 509 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 BPIFA3Q9BQP9 254 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 HEMGNQ9BXL5 484 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 GCOM2Q9BZD3 368 aaPredicted RBP12.54□□□□□ -0.4
COL25A1-204ENST00000494183 MKRN1Q9UHC7 482 aaKnown RBP12.54□□□□□ -0.4
COL25A1-204ENST00000494183 HACL1Q9UJ83 578 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 CEP170BQ9Y4F5 1589 aaPredicted RBP12.54□□□□□ -0.4
COL25A1-204ENST00000494183 CCDC151A5D8V7 595 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 DYNC1LI2O43237 492 aaPredicted RBP12.54□□□□□ -0.4
COL25A1-204ENST00000494183 BNIP3LO60238 219 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 ZBED1O96006 694 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 CPP00450 1065 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 GPC5P78333 572 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 KCNB1Q14721 858 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 ZSCAN26Q16670 478 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 XKR3Q5GH77 459 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 CLEC17AQ6ZS10 378 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 SPATA24Q86W54 205 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 HSPH1Q92598 858 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 AGBL1Q96MI9 1066 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 INTS9Q9NV88 658 aaKnown RBP12.54□□□□□ -0.4
COL25A1-204ENST00000494183 APBA1Q02410 837 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 STK4Q13043 487 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 MFSD14CQ5VZR4 134 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 RAPH1Q70E73 1250 aa12.54□□□□□ -0.4
COL25A1-204ENST00000494183 RPUSD2Q8IZ73 545 aaKnown RBP12.54□□□□□ -0.4
COL25A1-204ENST00000494183 SEPT1Q8WYJ6 367 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms