RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 C9IYK1 514 aa9.61□□□□□ -0.87
LRCH3-219ENST00000494069 TNFRSF10AO00220 468 aa9.61□□□□□ -0.87
LRCH3-219ENST00000494069 MAGEB2O15479 319 aa9.61□□□□□ -0.87
LRCH3-219ENST00000494069 CCNT1O60563 726 aaKnown RBP9.61□□□□□ -0.87
LRCH3-219ENST00000494069 CENPBP07199 599 aaPredicted RBP9.61□□□□□ -0.87
LRCH3-219ENST00000494069 DNAJB1P25685 340 aa9.61□□□□□ -0.87
LRCH3-219ENST00000494069 CAMK1Q14012 370 aa9.61□□□□□ -0.87
LRCH3-219ENST00000494069 DSC3Q14574 896 aa9.61□□□□□ -0.87
LRCH3-219ENST00000494069 FAM102BQ5T8I3 360 aa9.61□□□□□ -0.87
LRCH3-219ENST00000494069 PLA2G4FQ68DD2 849 aa9.61□□□□□ -0.87
LRCH3-219ENST00000494069 FAM177A1Q8N128 213 aaPredicted RBP9.61□□□□□ -0.87
LRCH3-219ENST00000494069 HAS1Q92839 578 aa9.61□□□□□ -0.87
LRCH3-219ENST00000494069 CLP1Q92989 425 aaKnown RBP9.61□□□□□ -0.87
LRCH3-219ENST00000494069 NIFKQ9BYG3 293 aaKnown RBP9.61□□□□□ -0.87
LRCH3-219ENST00000494069 ALG13Q9NP73 1137 aaKnown RBP9.61□□□□□ -0.87
LRCH3-219ENST00000494069 KCNMB3Q9NPA1 279 aa9.61□□□□□ -0.87
LRCH3-219ENST00000494069 RGS18Q9NS28 235 aa9.61□□□□□ -0.87
LRCH3-219ENST00000494069 SEPT9Q9UHD8 586 aaPredicted RBP9.61□□□□□ -0.87
LRCH3-219ENST00000494069 COG5Q9UP83 839 aa9.61□□□□□ -0.87
LRCH3-219ENST00000494069 CEP131Q9UPN4 1083 aa9.61□□□□□ -0.87
LRCH3-219ENST00000494069 BRWD1Q9NSI6 2320 aa9.61□□□□□ -0.87
LRCH3-219ENST00000494069 NLRC5Q86WI3 1866 aa9.6□□□□□ -0.87
LRCH3-219ENST00000494069 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.6□□□□□ -0.87
LRCH3-219ENST00000494069 DENND3A2RUS2 1198 aa9.6□□□□□ -0.87
LRCH3-219ENST00000494069 BTBD18B2RXH4 712 aa9.6□□□□□ -0.87
LRCH3-219ENST00000494069 C5orf67F2Z3F1 127 aa9.6□□□□□ -0.87
LRCH3-219ENST00000494069 GPR182O15218 404 aa9.6□□□□□ -0.87
LRCH3-219ENST00000494069 FGFR1P11362 822 aa9.6□□□□□ -0.87
LRCH3-219ENST00000494069 KCNA5P22460 613 aa9.6□□□□□ -0.87
LRCH3-219ENST00000494069 KRT2P35908 639 aa9.6□□□□□ -0.87
LRCH3-219ENST00000494069 SARSP49591 514 aaKnown RBP9.6□□□□□ -0.87
LRCH3-219ENST00000494069 GPC3P51654 580 aa9.6□□□□□ -0.87
LRCH3-219ENST00000494069 NPEPPSP55786 919 aa9.6□□□□□ -0.87
LRCH3-219ENST00000494069 GUCY1B3Q02153 619 aa9.6□□□□□ -0.87
LRCH3-219ENST00000494069 TBC1D8BQ0IIM8 1120 aa9.6□□□□□ -0.87
LRCH3-219ENST00000494069 PTPROQ16827 1216 aa9.6□□□□□ -0.87
LRCH3-219ENST00000494069 XKR3Q5GH77 459 aa9.6□□□□□ -0.87
LRCH3-219ENST00000494069 PPP4R3AQ6IN85 833 aa9.6□□□□□ -0.87
LRCH3-219ENST00000494069 ANO5Q75V66 913 aa9.6□□□□□ -0.87
LRCH3-219ENST00000494069 CMTR2Q8IYT2 770 aaKnown RBP9.6□□□□□ -0.87
LRCH3-219ENST00000494069 IL27Q8NEV9 243 aa9.6□□□□□ -0.87
LRCH3-219ENST00000494069 RDM1Q8NG50 284 aa9.6□□□□□ -0.87
LRCH3-219ENST00000494069 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.6□□□□□ -0.87
LRCH3-219ENST00000494069 UBE2ZQ9H832 354 aaPredicted RBP9.6□□□□□ -0.87
LRCH3-219ENST00000494069 RGL1Q9NZL6 768 aa9.6□□□□□ -0.87
LRCH3-219ENST00000494069 LRFN2Q9ULH4 789 aa9.6□□□□□ -0.87
LRCH3-219ENST00000494069 PLAGL2Q9UPG8 496 aa9.6□□□□□ -0.87
LRCH3-219ENST00000494069 PCDHB7Q9Y5E2 793 aa9.6□□□□□ -0.87
LRCH3-219ENST00000494069 IGKV6-21A0A0C4DH24 114 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 TBKBP1A7MCY6 615 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 H3BQ06 376 aaPredicted RBP9.59□□□□□ -0.87
LRCH3-219ENST00000494069 ZBTB39O15060 712 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 ITGB1P05556 798 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 RB1P06400 928 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 STAG3L1P0CL83 205 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 DARSP14868 501 aaKnown RBP9.59□□□□□ -0.87
LRCH3-219ENST00000494069 XBP1P17861 261 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 EIF4BP23588 611 aaKnown RBP9.59□□□□□ -0.87
LRCH3-219ENST00000494069 TMOD1P28289 359 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 GTF2F1P35269 517 aaKnown RBP eCLIP9.59□□□□□ -0.87
LRCH3-219ENST00000494069 IRS1P35568 1242 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 PSMC5P62195 406 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 FAM189BP81408 668 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 PPP2R5CQ13362 524 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 AAK1Q2M2I8 961 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 C8orf34Q49A92 452 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 NCAPH2Q6IBW4 605 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 SLC24A5Q71RS6 500 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 KSR1Q8IVT5 923 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 CCDC83Q8IWF9 413 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 KLHL23Q8NBE8 558 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 SPPL3Q8TCT6 385 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 NLRP7Q8WX94 980 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 WASF1Q92558 559 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 FAM20AQ96MK3 541 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 MAP7D2Q96T17 732 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 KIF2CQ99661 725 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 RNF19AQ9NV58 838 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 PCDHGC5Q9Y5F6 944 aa9.59□□□□□ -0.87
LRCH3-219ENST00000494069 A0A087WZ62 844 aa9.58□□□□□ -0.88
LRCH3-219ENST00000494069 MARCH6O60337 910 aa9.58□□□□□ -0.88
LRCH3-219ENST00000494069 MMP1P03956 469 aa9.58□□□□□ -0.88
LRCH3-219ENST00000494069 GCFC2P16383 781 aaKnown RBP9.58□□□□□ -0.88
LRCH3-219ENST00000494069 QARSP47897 775 aaKnown RBP9.58□□□□□ -0.88
LRCH3-219ENST00000494069 CYP4A11Q02928 519 aa9.58□□□□□ -0.88
LRCH3-219ENST00000494069 SPIRE1Q08AE8 756 aa9.58□□□□□ -0.88
LRCH3-219ENST00000494069 HYAL1Q12794 435 aa9.58□□□□□ -0.88
LRCH3-219ENST00000494069 CTTNQ14247 550 aaKnown RBP9.58□□□□□ -0.88
LRCH3-219ENST00000494069 TIGD5Q53EQ6 642 aa9.58□□□□□ -0.88
LRCH3-219ENST00000494069 LRRC55Q6ZSA7 311 aa9.58□□□□□ -0.88
LRCH3-219ENST00000494069 EP400NLQ6ZTU2 488 aa9.58□□□□□ -0.88
LRCH3-219ENST00000494069 DIS3L2Q8IYB7 885 aaKnown RBP9.58□□□□□ -0.88
LRCH3-219ENST00000494069 POF1BQ8WVV4 589 aa9.58□□□□□ -0.88
LRCH3-219ENST00000494069 KHSRPQ92945 711 aaKnown RBP eCLIP9.58□□□□□ -0.881e-6■■■■□ 23.9
LRCH3-219ENST00000494069 DYDC2Q96IM9 177 aa9.58□□□□□ -0.88
LRCH3-219ENST00000494069 SCLT1Q96NL6 688 aa9.58□□□□□ -0.88
LRCH3-219ENST00000494069 FDXACB1Q9BRP7 624 aaPredicted RBP9.58□□□□□ -0.88
LRCH3-219ENST00000494069 C11orf84Q9BUA3 381 aaPredicted RBP9.58□□□□□ -0.88
LRCH3-219ENST00000494069 NSUN3Q9H649 340 aaKnown RBP9.58□□□□□ -0.88
LRCH3-219ENST00000494069 CD320Q9NPF0 282 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms