RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 ARFIP2P53365 341 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 PRKG1Q13976 671 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 GCKRQ14397 625 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 CWF19L2Q2TBE0 894 aaKnown RBP7.38□□□□□ -1.23
VPS13B-205ENST00000493587 EAPPQ56P03 285 aaPredicted RBP7.38□□□□□ -1.23
VPS13B-205ENST00000493587 PAPD7Q5XG87 772 aaKnown RBP7.38□□□□□ -1.23
VPS13B-205ENST00000493587 HAUS3Q68CZ6 603 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 MIER3Q7Z3K6 550 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 DDHD1Q8NEL9 900 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 KRT12Q99456 494 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 FAM129AQ9BZQ8 928 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 FHDC1Q9C0D6 1143 aaPredicted RBP7.38□□□□□ -1.23
VPS13B-205ENST00000493587 BTG4Q9NY30 223 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 KLHL14Q9P2G3 628 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 HESX1Q9UBX0 185 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 LINC00854A0A1B0GVQ3 168 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 SPDYE16A6NNV3 312 aaPredicted RBP7.38□□□□□ -1.23
VPS13B-205ENST00000493587 MARCH6O60337 910 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 TBC1D12O60347 775 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 ENTPD5O75356 428 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 LDHBP07195 334 aaKnown RBP7.38□□□□□ -1.23
VPS13B-205ENST00000493587 METTL21CQ5VZV1 264 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 NFRKBQ6P4R8 1299 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 TOM1L2Q6ZVM7 507 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 MARK2Q7KZI7 788 aaKnown RBP7.38□□□□□ -1.23
VPS13B-205ENST00000493587 LINC00301Q8NCQ3 95 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 TTC8Q8TAM2 541 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 ASAP3Q8TDY4 903 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 ATP8B4Q8TF62 1192 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 MAML3Q96JK9 1138 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 PRMT1Q99873 361 aaKnown RBP7.38□□□□□ -1.23
VPS13B-205ENST00000493587 TUT1Q9H6E5 874 aaKnown RBP7.38□□□□□ -1.23
VPS13B-205ENST00000493587 ABHD10Q9NUJ1 306 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 TXLNGQ9NUQ3 528 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 DIS3Q9Y2L1 958 aaKnown RBP7.38□□□□□ -1.23
VPS13B-205ENST00000493587 ATP6V0A2Q9Y487 856 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 USP15Q9Y4E8 981 aaPredicted RBP7.38□□□□□ -1.23
VPS13B-205ENST00000493587 ABCC12Q96J65 1359 aa7.38□□□□□ -1.23
VPS13B-205ENST00000493587 NOTOA8MTQ0 251 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 XPOTO43592 962 aaKnown RBP7.37□□□□□ -1.23
VPS13B-205ENST00000493587 B3GALNT1O75752 331 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 RXRGP48443 463 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 RASSF2P50749 326 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 FMR1Q06787 632 aaKnown RBP eCLIP7.37□□□□□ -1.23
VPS13B-205ENST00000493587 CAMK2BQ13554 666 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 TMTC4Q5T4D3 741 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 DHX32Q7L7V1 743 aaKnown RBP7.37□□□□□ -1.23
VPS13B-205ENST00000493587 VPS36Q86VN1 386 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 ISCA1Q9BUE6 129 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 STK33Q9BYT3 514 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 SAP30BPQ9UHR5 308 aaKnown RBP7.37□□□□□ -1.23
VPS13B-205ENST00000493587 PASKQ96RG2 1323 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 FBP2O00757 339 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 LMNAP02545 664 aaKnown RBP7.37□□□□□ -1.23
VPS13B-205ENST00000493587 LYNP07948 512 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 GLI1P08151 1106 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 IARSP41252 1262 aaKnown RBP7.37□□□□□ -1.23
VPS13B-205ENST00000493587 PIP4K2AP48426 406 aaPredicted RBP7.37□□□□□ -1.23
VPS13B-205ENST00000493587 CDK17Q00537 523 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 PTK7Q13308 1070 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 NR1I3Q14994 352 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 GPR162Q16538 588 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 PDCD4Q53EL6 469 aaKnown RBP7.37□□□□□ -1.23
VPS13B-205ENST00000493587 BPHLQ86WA6 291 aaPredicted RBP7.37□□□□□ -1.23
VPS13B-205ENST00000493587 KSR1Q8IVT5 923 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 LRRC43Q8N309 656 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 FBXL16Q8N461 479 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 RBM12Q9NTZ6 932 aaKnown RBP7.37□□□□□ -1.23
VPS13B-205ENST00000493587 HYOU1Q9Y4L1 999 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 KIF13BQ9NQT8 1826 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 A0A1W2PQ67 120 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 ASAP2O43150 1006 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 PEX11AO75192 247 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 GYPCP04921 128 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 TCP1P17987 556 aaKnown RBP7.37□□□□□ -1.23
VPS13B-205ENST00000493587 GNAZP19086 355 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 ADD1P35611 737 aaKnown RBP7.37□□□□□ -1.23
VPS13B-205ENST00000493587 SLC16A2P36021 539 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 HSD17B3P37058 310 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 ERFP50548 548 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 CYP27A1Q02318 531 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 TRIM28Q13263 835 aaKnown RBP7.37□□□□□ -1.23
VPS13B-205ENST00000493587 ARHGEF6Q15052 776 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 VWA3BQ502W6 1294 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 RSPH3Q86UC2 560 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 CD302Q8IX05 232 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 VGLL2Q8N8G2 317 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 APPBP2Q92624 585 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 ZNF333Q96JL9 665 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 AGXT2Q9BYV1 514 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 NCOA5Q9HCD5 579 aaKnown RBP7.37□□□□□ -1.23
VPS13B-205ENST00000493587 FGFR1OP2Q9NVK5 253 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 HACD3Q9P035 362 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 HBS1LQ9Y450 684 aaKnown RBP7.37□□□□□ -1.23
VPS13B-205ENST00000493587 NAV1Q8NEY1 1877 aa7.37□□□□□ -1.23
VPS13B-205ENST00000493587 ANO9A1A5B4 782 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 DCDC2CA8MYV0 355 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 MATN2O00339 956 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 CAPN9O14815 690 aa7.36□□□□□ -1.23
VPS13B-205ENST00000493587 BIRC5O15392 142 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms