RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 ZNF397Q8NF99 534 aaPredicted RBP11.11□□□□□ -0.63
PRPF3-206ENST00000493553 CEP63Q96MT8 703 aa11.11□□□□□ -0.63
PRPF3-206ENST00000493553 SPON1Q9HCB6 807 aa11.11□□□□□ -0.63
PRPF3-206ENST00000493553 BLOC1S4Q9NUP1 217 aa11.11□□□□□ -0.63
PRPF3-206ENST00000493553 TCEAL9Q9UHQ7 104 aa11.11□□□□□ -0.63
PRPF3-206ENST00000493553 HACL1Q9UJ83 578 aa11.11□□□□□ -0.63
PRPF3-206ENST00000493553 CCPG1Q9ULG6 757 aa11.11□□□□□ -0.63
PRPF3-206ENST00000493553 DNMT3AQ9Y6K1 912 aaPredicted RBP11.11□□□□□ -0.63
PRPF3-206ENST00000493553 COL4A5P29400 1685 aa11.11□□□□□ -0.63
PRPF3-206ENST00000493553 MYMKA6NI61 221 aa11.1□□□□□ -0.63
PRPF3-206ENST00000493553 CFBP00751 764 aa11.1□□□□□ -0.63
PRPF3-206ENST00000493553 PLA2G4BP0C869 781 aa11.1□□□□□ -0.63
PRPF3-206ENST00000493553 TNNT1P13805 278 aa11.1□□□□□ -0.63
PRPF3-206ENST00000493553 ADH6P28332 368 aa11.1□□□□□ -0.63
PRPF3-206ENST00000493553 PBX1P40424 430 aa11.1□□□□□ -0.63
PRPF3-206ENST00000493553 HSD17B4P51659 736 aa11.1□□□□□ -0.63
PRPF3-206ENST00000493553 PPP2R5CQ13362 524 aa11.1□□□□□ -0.63
PRPF3-206ENST00000493553 FAM26FQ5R3K3 315 aa11.1□□□□□ -0.63
PRPF3-206ENST00000493553 NOL9Q5SY16 702 aaKnown RBP11.1□□□□□ -0.63
PRPF3-206ENST00000493553 ZNF468Q5VIY5 522 aaPredicted RBP11.1□□□□□ -0.63
PRPF3-206ENST00000493553 APTXQ7Z2E3 356 aaKnown RBP11.1□□□□□ -0.63
PRPF3-206ENST00000493553 TMTC1Q8IUR5 882 aa11.1□□□□□ -0.63
PRPF3-206ENST00000493553 MYRIPQ8NFW9 859 aa11.1□□□□□ -0.63
PRPF3-206ENST00000493553 C12orf42Q96LP6 360 aa11.1□□□□□ -0.63
PRPF3-206ENST00000493553 MED15Q96RN5 788 aa11.1□□□□□ -0.63
PRPF3-206ENST00000493553 PLIN2Q99541 437 aa11.1□□□□□ -0.63
PRPF3-206ENST00000493553 SRRTQ9BXP5 876 aaKnown RBP11.1□□□□□ -0.63
PRPF3-206ENST00000493553 EDEM3Q9BZQ6 932 aa11.1□□□□□ -0.63
PRPF3-206ENST00000493553 PANK4Q9NVE7 773 aa11.1□□□□□ -0.63
PRPF3-206ENST00000493553 ZNHIT6Q9NWK9 470 aaKnown RBP11.1□□□□□ -0.63
PRPF3-206ENST00000493553 GDAQ9Y2T3 454 aa11.1□□□□□ -0.63
PRPF3-206ENST00000493553 COL4A3BPQ9Y5P4 624 aa11.1□□□□□ -0.63
PRPF3-206ENST00000493553 MYPNQ86TC9 1320 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 MEIS1O00470 390 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 EDIL3O43854 480 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 GAS7O60861 476 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 EYA4O95677 639 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 EPXP11678 715 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 IDEP14735 1019 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 RFX1P22670 979 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 CASP1P29466 404 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 GTF2F1P35269 517 aaKnown RBP eCLIP11.09□□□□□ -0.63
PRPF3-206ENST00000493553 BACE1P56817 501 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 FKBP3Q00688 224 aaKnown RBP11.09□□□□□ -0.63
PRPF3-206ENST00000493553 SHROOM1Q2M3G4 852 aaPredicted RBP11.09□□□□□ -0.63
PRPF3-206ENST00000493553 FIGNQ5HY92 759 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 CEP135Q66GS9 1140 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 CCDC174Q6PII3 467 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 GPBP1Q86WP2 473 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 SMYD4Q8IYR2 804 aaPredicted RBP11.09□□□□□ -0.63
PRPF3-206ENST00000493553 TXLNBQ8N3L3 684 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 ZNF280CQ8ND82 737 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 SLC5A5Q92911 643 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 SUSD3Q96L08 255 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 NACC1Q96RE7 527 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 TEKT3Q9BXF9 490 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 SLC38A10Q9HBR0 1119 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 TBC1D22BQ9NU19 505 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 GPRC5DQ9NZD1 345 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 TMOD4Q9NZQ9 345 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 SEL1LQ9UBV2 794 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 PPP1R9AQ9ULJ8 1098 aa11.09□□□□□ -0.63
PRPF3-206ENST00000493553 ARFGEF1Q9Y6D6 1849 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 OPLAHO14841 1288 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 MSH4O15457 936 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 MAFGO15525 162 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 DKC1O60832 514 aaKnown RBP eCLIP11.08□□□□□ -0.64
PRPF3-206ENST00000493553 MFAP3LO75121 409 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 TBCAO75347 108 aaKnown RBP11.08□□□□□ -0.64
PRPF3-206ENST00000493553 SSBP05455 408 aaKnown RBP eCLIP11.08□□□□□ -0.64
PRPF3-206ENST00000493553 WEE1P30291 646 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 MTIF2P46199 727 aaKnown RBP11.08□□□□□ -0.64
PRPF3-206ENST00000493553 UBXN1Q04323 297 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 EHHADHQ08426 723 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 SPIRE1Q08AE8 756 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 STK4Q13043 487 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 TUBB2AQ13885 445 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 EPHA7Q15375 998 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 HIF1AQ16665 826 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 EDRF1Q3B7T1 1238 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 TBC1D10BQ4KMP7 808 aaPredicted RBP11.08□□□□□ -0.64
PRPF3-206ENST00000493553 LRCH2Q5VUJ6 765 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 NCAPH2Q6IBW4 605 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 CYP26C1Q6V0L0 522 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 MB21D1Q8N884 522 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 SYT2Q8N9I0 419 aaPredicted RBP11.08□□□□□ -0.64
PRPF3-206ENST00000493553 RDM1Q8NG50 284 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 LENG9Q96B70 501 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 DNAJC19Q96DA6 116 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 HSH2DQ96JZ2 352 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 TUBGCP2Q9BSJ2 902 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 TUBB2BQ9BVA1 445 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 TIPINQ9BVW5 301 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 TANGO6Q9C0B7 1094 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 INTS13Q9NVM9 706 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 HOXC10Q9NYD6 342 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 KLF15Q9UIH9 416 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 FAM184BQ9ULE4 1060 aa11.08□□□□□ -0.64
PRPF3-206ENST00000493553 NOVA2Q9UNW9 492 aaKnown RBP11.08□□□□□ -0.64
PRPF3-206ENST00000493553 LUC7L2Q9Y383 392 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms