RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 PDGFBP01127 241 aaPredicted RBP24.31■■□□□ 1.48
PFDN4-205ENST00000493356 PSAPP07602 524 aa24.31■■□□□ 1.48
PFDN4-205ENST00000493356 ZSCAN20P17040 1043 aaPredicted RBP24.31■■□□□ 1.48
PFDN4-205ENST00000493356 EIF4BP23588 611 aaKnown RBP24.31■■□□□ 1.48
PFDN4-205ENST00000493356 DHX32Q7L7V1 743 aaKnown RBP24.31■■□□□ 1.48
PFDN4-205ENST00000493356 CASP10Q92851 521 aa24.31■■□□□ 1.48
PFDN4-205ENST00000493356 MAP7D2Q96T17 732 aa24.31■■□□□ 1.48
PFDN4-205ENST00000493356 MYO10Q9HD67 2058 aa24.31■■□□□ 1.48
PFDN4-205ENST00000493356 KLF18A0A0U1RQI7 1052 aa24.3■■□□□ 1.48
PFDN4-205ENST00000493356 PFKFB3Q16875 520 aaPredicted RBP24.3■■□□□ 1.48
PFDN4-205ENST00000493356 CLLU1OSQ5K130 101 aa24.3■■□□□ 1.48
PFDN4-205ENST00000493356 EFCAB12Q6NXP0 572 aa24.3■■□□□ 1.48
PFDN4-205ENST00000493356 LRRC71Q8N4P6 559 aa24.3■■□□□ 1.48
PFDN4-205ENST00000493356 RIPOR3Q96MK2 946 aa24.3■■□□□ 1.48
PFDN4-205ENST00000493356 IRF2BPLQ9H1B7 796 aa24.3■■□□□ 1.48
PFDN4-205ENST00000493356 TSHZ2Q9NRE2 1034 aa24.3■■□□□ 1.48
PFDN4-205ENST00000493356 TCEAL9Q9UHQ7 104 aa24.3■■□□□ 1.48
PFDN4-205ENST00000493356 NR2E1Q9Y466 385 aa24.3■■□□□ 1.48
PFDN4-205ENST00000493356 HCFC2Q9Y5Z7 792 aa24.3■■□□□ 1.48
PFDN4-205ENST00000493356 ESYT2A0FGR8 921 aa24.29■■□□□ 1.48
PFDN4-205ENST00000493356 GFRA3O60609 400 aa24.29■■□□□ 1.48
PFDN4-205ENST00000493356 TMOD1P28289 359 aa24.29■■□□□ 1.48
PFDN4-205ENST00000493356 SMC1AQ14683 1233 aaKnown RBP24.29■■□□□ 1.48
PFDN4-205ENST00000493356 TPRNQ4KMQ1 711 aa24.29■■□□□ 1.48
PFDN4-205ENST00000493356 SLC39A11Q8N1S5 342 aa24.29■■□□□ 1.48
PFDN4-205ENST00000493356 MRPL43Q8N983 215 aaKnown RBP24.29■■□□□ 1.48
PFDN4-205ENST00000493356 RNF169Q8NCN4 708 aa24.29■■□□□ 1.48
PFDN4-205ENST00000493356 KREMEN2Q8NCW0 462 aa24.29■■□□□ 1.48
PFDN4-205ENST00000493356 FAM167AQ96KS9 214 aa24.29■■□□□ 1.48
PFDN4-205ENST00000493356 SNX27Q96L92 541 aa24.29■■□□□ 1.48
PFDN4-205ENST00000493356 ZMYND12Q9H0C1 365 aa24.29■■□□□ 1.48
PFDN4-205ENST00000493356 C2orf71A6NGG8 1288 aa24.28■■□□□ 1.48
PFDN4-205ENST00000493356 RCAN1P53805 252 aa24.28■■□□□ 1.48
PFDN4-205ENST00000493356 ADCK5Q3MIX3 580 aa24.28■■□□□ 1.48
PFDN4-205ENST00000493356 PRR16Q569H4 304 aa24.28■■□□□ 1.48
PFDN4-205ENST00000493356 MCTP2Q6DN12 878 aa24.28■■□□□ 1.48
PFDN4-205ENST00000493356 REXO1Q8N1G1 1221 aaKnown RBP24.28■■□□□ 1.48
PFDN4-205ENST00000493356 ZNF710Q8N1W2 664 aa24.28■■□□□ 1.48
PFDN4-205ENST00000493356 ATOH1Q92858 354 aaPredicted RBP24.28■■□□□ 1.48
PFDN4-205ENST00000493356 ZNF668Q96K58 619 aaPredicted RBP24.28■■□□□ 1.48
PFDN4-205ENST00000493356 ADAM7Q9H2U9 754 aa24.28■■□□□ 1.48
PFDN4-205ENST00000493356 POMKQ9H5K3 350 aa24.28■■□□□ 1.48
PFDN4-205ENST00000493356 SAMM50Q9Y512 469 aa24.28■■□□□ 1.48
PFDN4-205ENST00000493356 ZNF862O60290 1169 aa24.27■■□□□ 1.48
PFDN4-205ENST00000493356 ADD1P35611 737 aaKnown RBP24.27■■□□□ 1.48
PFDN4-205ENST00000493356 GPC3P51654 580 aa24.27■■□□□ 1.48
PFDN4-205ENST00000493356 IRX6P78412 446 aaPredicted RBP24.27■■□□□ 1.48
PFDN4-205ENST00000493356 ITIH3Q06033 890 aa24.27■■□□□ 1.48
PFDN4-205ENST00000493356 CES5AQ6NT32 575 aa24.27■■□□□ 1.48
PFDN4-205ENST00000493356 ZNF598Q86UK7 904 aaKnown RBP24.27■■□□□ 1.48
PFDN4-205ENST00000493356 RASEFQ8IZ41 740 aa24.27■■□□□ 1.48
PFDN4-205ENST00000493356 NECTIN4Q96NY8 510 aa24.27■■□□□ 1.48
PFDN4-205ENST00000493356 C6orf50Q9HD87 102 aa24.27■■□□□ 1.48
PFDN4-205ENST00000493356 SORCS3Q9UPU3 1222 aa24.27■■□□□ 1.48
PFDN4-205ENST00000493356 PLXNA3P51805 1871 aa24.27■■□□□ 1.48
PFDN4-205ENST00000493356 A0A0U1RQF3 1178 aa24.26■■□□□ 1.47
PFDN4-205ENST00000493356 WDR64B1ANS9 1081 aa24.26■■□□□ 1.47
PFDN4-205ENST00000493356 C2CD4DB7Z1M9 353 aa24.26■■□□□ 1.47
PFDN4-205ENST00000493356 H0Y858 1186 aa24.26■■□□□ 1.47
PFDN4-205ENST00000493356 OATP04181 439 aa24.26■■□□□ 1.47
PFDN4-205ENST00000493356 DARSP14868 501 aaKnown RBP24.26■■□□□ 1.47
PFDN4-205ENST00000493356 CIITAP33076 1130 aa24.26■■□□□ 1.47
PFDN4-205ENST00000493356 NUBP1P53384 320 aa24.26■■□□□ 1.47
PFDN4-205ENST00000493356 MTMR3Q13615 1198 aa24.26■■□□□ 1.47
PFDN4-205ENST00000493356 TSGA10IPQ3SY00 556 aa24.26■■□□□ 1.47
PFDN4-205ENST00000493356 UBALD2Q8IYN6 164 aa24.26■■□□□ 1.47
PFDN4-205ENST00000493356 HELQQ8TDG4 1101 aa24.26■■□□□ 1.47
PFDN4-205ENST00000493356 LENG9Q96B70 501 aa24.26■■□□□ 1.47
PFDN4-205ENST00000493356 MYO15AQ9UKN7 3530 aa24.26■■□□□ 1.47
PFDN4-205ENST00000493356 CLASP2O75122 1294 aaKnown RBP24.25■■□□□ 1.47
PFDN4-205ENST00000493356 BRD1O95696 1058 aa24.25■■□□□ 1.47
PFDN4-205ENST00000493356 EOMESO95936 686 aa24.25■■□□□ 1.47
PFDN4-205ENST00000493356 FGFR4P22455 802 aa24.25■■□□□ 1.47
PFDN4-205ENST00000493356 NRBP2Q9NSY0 501 aa24.25■■□□□ 1.47
PFDN4-205ENST00000493356 NAP1L2Q9ULW6 460 aaPredicted RBP24.25■■□□□ 1.47
PFDN4-205ENST00000493356 SPTBN4Q9H254 2564 aa24.25■■□□□ 1.47
PFDN4-205ENST00000493356 METAP2P50579 478 aaKnown RBP eCLIP24.24■■□□□ 1.47
PFDN4-205ENST00000493356 PRKCEQ02156 737 aa24.24■■□□□ 1.47
PFDN4-205ENST00000493356 CCDC12Q8WUD4 166 aaPredicted RBP24.24■■□□□ 1.47
PFDN4-205ENST00000493356 SCLT1Q96NL6 688 aa24.24■■□□□ 1.47
PFDN4-205ENST00000493356 MRPL9Q9BYD2 267 aaKnown RBP24.24■■□□□ 1.47
PFDN4-205ENST00000493356 DISC1Q9NRI5 854 aa24.24■■□□□ 1.47
PFDN4-205ENST00000493356 PTPRZ1P23471 2315 aaPredicted RBP24.23■■□□□ 1.47
PFDN4-205ENST00000493356 CCDC196A0A1B0GTZ2 297 aa24.23■■□□□ 1.47
PFDN4-205ENST00000493356 NT5C1B-RDH14C9J2C7 533 aa24.23■■□□□ 1.47
PFDN4-205ENST00000493356 GALR2O43603 387 aaPredicted RBP24.23■■□□□ 1.47
PFDN4-205ENST00000493356 MTHFRP42898 656 aa24.23■■□□□ 1.47
PFDN4-205ENST00000493356 ALDH7A1P49419 539 aaKnown RBP24.23■■□□□ 1.47
PFDN4-205ENST00000493356 BCAR1P56945 870 aa24.23■■□□□ 1.47
PFDN4-205ENST00000493356 UGCGQ16739 394 aa24.23■■□□□ 1.47
PFDN4-205ENST00000493356 DACT1Q9NYF0 836 aa24.23■■□□□ 1.47
PFDN4-205ENST00000493356 RIF1Q5UIP0 2472 aaKnown RBP24.22■■□□□ 1.47
PFDN4-205ENST00000493356 CXCL14O95715 111 aa24.22■■□□□ 1.47
PFDN4-205ENST00000493356 WEE2P0C1S8 567 aa24.22■■□□□ 1.47
PFDN4-205ENST00000493356 GNA11P29992 359 aa24.22■■□□□ 1.47
PFDN4-205ENST00000493356 CA8P35219 290 aa24.22■■□□□ 1.47
PFDN4-205ENST00000493356 KRT32Q14532 448 aa24.22■■□□□ 1.47
PFDN4-205ENST00000493356 NLRP7Q8WX94 980 aa24.22■■□□□ 1.47
PFDN4-205ENST00000493356 TMEM169Q96HH4 297 aa24.22■■□□□ 1.47
PFDN4-205ENST00000493356 SMOC2Q9H3U7 446 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms