RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 ZBTB43O43298 467 aa12.46□□□□□ -0.41
SNRNP200-207ENST00000493271 VTNP04004 478 aa12.46□□□□□ -0.41
SNRNP200-207ENST00000493271 FAM86B2P0C5J1 330 aa12.46□□□□□ -0.41
SNRNP200-207ENST00000493271 ATP4AP20648 1035 aa12.46□□□□□ -0.41
SNRNP200-207ENST00000493271 APOBRQ0VD83 1088 aa12.46□□□□□ -0.41
SNRNP200-207ENST00000493271 NECTIN1Q15223 517 aa12.46□□□□□ -0.41
SNRNP200-207ENST00000493271 CREB3L3Q68CJ9 461 aa12.46□□□□□ -0.41
SNRNP200-207ENST00000493271 TYW1BQ6NUM6 668 aa12.46□□□□□ -0.41
SNRNP200-207ENST00000493271 ECHDC2Q86YB7 292 aa12.46□□□□□ -0.41
SNRNP200-207ENST00000493271 ZDHHC14Q8IZN3 488 aa12.46□□□□□ -0.41
SNRNP200-207ENST00000493271 SLC39A11Q8N1S5 342 aa12.46□□□□□ -0.41
SNRNP200-207ENST00000493271 CRYGNQ8WXF5 182 aa12.46□□□□□ -0.41
SNRNP200-207ENST00000493271 PGBD1Q96JS3 809 aa12.46□□□□□ -0.41
SNRNP200-207ENST00000493271 ZNF577Q9BSK1 485 aa12.46□□□□□ -0.41
SNRNP200-207ENST00000493271 C2orf71A6NGG8 1288 aa12.45□□□□□ -0.42
SNRNP200-207ENST00000493271 NBL1P41271 181 aa12.45□□□□□ -0.42
SNRNP200-207ENST00000493271 ALDH7A1P49419 539 aaKnown RBP12.45□□□□□ -0.42
SNRNP200-207ENST00000493271 POLGP54098 1239 aaPredicted RBP12.45□□□□□ -0.42
SNRNP200-207ENST00000493271 NLRP11P59045 1033 aaKnown RBP12.45□□□□□ -0.42
SNRNP200-207ENST00000493271 FUT2Q10981 343 aa12.45□□□□□ -0.42
SNRNP200-207ENST00000493271 KIAA1841Q6NSI8 718 aa12.45□□□□□ -0.42
SNRNP200-207ENST00000493271 LLGL2Q6P1M3 1020 aa12.45□□□□□ -0.42
SNRNP200-207ENST00000493271 LRRC55Q6ZSA7 311 aa12.45□□□□□ -0.42
SNRNP200-207ENST00000493271 RAB11FIP4Q86YS3 637 aa12.45□□□□□ -0.42
SNRNP200-207ENST00000493271 TMEM169Q96HH4 297 aa12.45□□□□□ -0.42
SNRNP200-207ENST00000493271 TSHZ2Q9NRE2 1034 aa12.45□□□□□ -0.42
SNRNP200-207ENST00000493271 NRBP2Q9NSY0 501 aa12.45□□□□□ -0.42
SNRNP200-207ENST00000493271 FAM86C1Q9NVL1 165 aa12.45□□□□□ -0.42
SNRNP200-207ENST00000493271 HCSTQ9UBK5 93 aa12.45□□□□□ -0.42
SNRNP200-207ENST00000493271 AKT3Q9Y243 479 aa12.45□□□□□ -0.42
SNRNP200-207ENST00000493271 IRAK3Q9Y616 596 aa12.45□□□□□ -0.42
SNRNP200-207ENST00000493271 V9GY48 417 aaPredicted RBP12.45□□□□□ -0.42
SNRNP200-207ENST00000493271 CFAP54Q96N23 3096 aa12.45□□□□□ -0.42
SNRNP200-207ENST00000493271 CCDC196A0A1B0GTZ2 297 aa12.44□□□□□ -0.42
SNRNP200-207ENST00000493271 WDR64B1ANS9 1081 aa12.44□□□□□ -0.42
SNRNP200-207ENST00000493271 H0Y858 1186 aa12.44□□□□□ -0.42
SNRNP200-207ENST00000493271 SKIP12755 728 aa12.44□□□□□ -0.42
SNRNP200-207ENST00000493271 GNA11P29992 359 aa12.44□□□□□ -0.42
SNRNP200-207ENST00000493271 CLCN5P51795 746 aa12.44□□□□□ -0.42
SNRNP200-207ENST00000493271 ATAT1Q5SQI0 421 aa12.44□□□□□ -0.42
SNRNP200-207ENST00000493271 EFCAB12Q6NXP0 572 aa12.44□□□□□ -0.42
SNRNP200-207ENST00000493271 PPFIBP1Q86W92 1011 aa12.44□□□□□ -0.42
SNRNP200-207ENST00000493271 REXO1Q8N1G1 1221 aaKnown RBP12.44□□□□□ -0.42
SNRNP200-207ENST00000493271 LINC01465Q8N7H1 131 aa12.44□□□□□ -0.42
SNRNP200-207ENST00000493271 TDRD5Q8NAT2 981 aaKnown RBP12.44□□□□□ -0.42
SNRNP200-207ENST00000493271 TMEM87AQ8NBN3 555 aa12.44□□□□□ -0.42
SNRNP200-207ENST00000493271 ESYT1Q9BSJ8 1104 aa12.44□□□□□ -0.42
SNRNP200-207ENST00000493271 TRAIPQ9BWF2 469 aa12.44□□□□□ -0.42
SNRNP200-207ENST00000493271 LRRC2Q9BYS8 371 aa12.44□□□□□ -0.42
SNRNP200-207ENST00000493271 ADAMTS10Q9H324 1103 aa12.44□□□□□ -0.42
SNRNP200-207ENST00000493271 POMKQ9H5K3 350 aa12.44□□□□□ -0.42
SNRNP200-207ENST00000493271 C6orf50Q9HD87 102 aa12.44□□□□□ -0.42
SNRNP200-207ENST00000493271 CHST12Q9NRB3 414 aa12.44□□□□□ -0.42
SNRNP200-207ENST00000493271 RNF19AQ9NV58 838 aa12.44□□□□□ -0.42
SNRNP200-207ENST00000493271 SAMM50Q9Y512 469 aa12.44□□□□□ -0.42
SNRNP200-207ENST00000493271 ZFHX2Q9C0A1 2572 aaPredicted RBP12.44□□□□□ -0.42
SNRNP200-207ENST00000493271 GOLGA8AA7E2F4 631 aa12.43□□□□□ -0.42
SNRNP200-207ENST00000493271 GOLGA8BA8MQT2 603 aa12.43□□□□□ -0.42
SNRNP200-207ENST00000493271 C2CD4DB7Z1M9 353 aa12.43□□□□□ -0.42
SNRNP200-207ENST00000493271 CLASP2O75122 1294 aaKnown RBP12.43□□□□□ -0.42
SNRNP200-207ENST00000493271 BRD1O95696 1058 aa12.43□□□□□ -0.42
SNRNP200-207ENST00000493271 OATP04181 439 aa12.43□□□□□ -0.42
SNRNP200-207ENST00000493271 HMGB1P09429 215 aaKnown RBP12.43□□□□□ -0.42
SNRNP200-207ENST00000493271 DARSP14868 501 aaKnown RBP12.43□□□□□ -0.42
SNRNP200-207ENST00000493271 CIITAP33076 1130 aa12.43□□□□□ -0.42
SNRNP200-207ENST00000493271 GPC3P51654 580 aa12.43□□□□□ -0.42
SNRNP200-207ENST00000493271 CLCN3P51790 818 aa12.43□□□□□ -0.42
SNRNP200-207ENST00000493271 PFKFB3Q16875 520 aaPredicted RBP12.43□□□□□ -0.42
SNRNP200-207ENST00000493271 ASTLQ6HA08 431 aaPredicted RBP12.43□□□□□ -0.42
SNRNP200-207ENST00000493271 DHX32Q7L7V1 743 aaKnown RBP12.43□□□□□ -0.42
SNRNP200-207ENST00000493271 ZNF598Q86UK7 904 aaKnown RBP12.43□□□□□ -0.42
SNRNP200-207ENST00000493271 BICD2Q8TD16 824 aa12.43□□□□□ -0.42
SNRNP200-207ENST00000493271 PPP1R16BQ96T49 567 aa12.43□□□□□ -0.42
SNRNP200-207ENST00000493271 APOL5Q9BWW9 433 aa12.43□□□□□ -0.42
SNRNP200-207ENST00000493271 ZMYND12Q9H0C1 365 aa12.43□□□□□ -0.42
SNRNP200-207ENST00000493271 MFSD1Q9H3U5 465 aa12.43□□□□□ -0.42
SNRNP200-207ENST00000493271 ANO2Q9NQ90 1003 aa12.43□□□□□ -0.42
SNRNP200-207ENST00000493271 GABBR1Q9UBS5 961 aa12.43□□□□□ -0.42
SNRNP200-207ENST00000493271 EVPLQ92817 2033 aa12.42□□□□□ -0.42
SNRNP200-207ENST00000493271 PDGFBP01127 241 aaPredicted RBP12.42□□□□□ -0.42
SNRNP200-207ENST00000493271 SFNP31947 248 aa12.42□□□□□ -0.42
SNRNP200-207ENST00000493271 EXOSC10Q01780 885 aaKnown RBP12.42□□□□□ -0.42
SNRNP200-207ENST00000493271 KRT32Q14532 448 aa12.42□□□□□ -0.42
SNRNP200-207ENST00000493271 TSGA10IPQ3SY00 556 aa12.42□□□□□ -0.42
SNRNP200-207ENST00000493271 CLLU1OSQ5K130 101 aa12.42□□□□□ -0.42
SNRNP200-207ENST00000493271 JAKMIP3Q5VZ66 844 aa12.42□□□□□ -0.42
SNRNP200-207ENST00000493271 TMEM105Q8N8V8 129 aa12.42□□□□□ -0.42
SNRNP200-207ENST00000493271 RNF169Q8NCN4 708 aa12.42□□□□□ -0.42
SNRNP200-207ENST00000493271 RDM1Q8NG50 284 aa12.42□□□□□ -0.42
SNRNP200-207ENST00000493271 ACSF2Q96CM8 615 aaPredicted RBP12.42□□□□□ -0.42
SNRNP200-207ENST00000493271 SCLT1Q96NL6 688 aa12.42□□□□□ -0.42
SNRNP200-207ENST00000493271 GCOM2Q9BZD3 368 aaPredicted RBP12.42□□□□□ -0.42
SNRNP200-207ENST00000493271 INO80BQ9C086 356 aaPredicted RBP12.42□□□□□ -0.42
SNRNP200-207ENST00000493271 ZBP1Q9H171 429 aa12.42□□□□□ -0.42
SNRNP200-207ENST00000493271 DBR1Q9UK59 544 aaKnown RBP12.42□□□□□ -0.42
SNRNP200-207ENST00000493271 MYO15AQ9UKN7 3530 aa12.42□□□□□ -0.42
SNRNP200-207ENST00000493271 MYH9P35579 1960 aaKnown RBP12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 PRR23AA6NEV1 266 aa12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 CXCL14O95715 111 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms