RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 ATP1A3P13637 1013 aa17.45■□□□□ 0.38
BRAT1-206ENST00000493232 QARSP47897 775 aaKnown RBP17.45■□□□□ 0.38
BRAT1-206ENST00000493232 ESRRGP62508 458 aa17.45■□□□□ 0.38
BRAT1-206ENST00000493232 COASYQ13057 564 aa17.45■□□□□ 0.38
BRAT1-206ENST00000493232 NR1H3Q13133 447 aa17.45■□□□□ 0.38
BRAT1-206ENST00000493232 ENAHQ8N8S7 591 aaPredicted RBP17.45■□□□□ 0.38
BRAT1-206ENST00000493232 BPIFA3Q9BQP9 254 aa17.45■□□□□ 0.38
BRAT1-206ENST00000493232 FAM96AQ9H5X1 160 aa17.45■□□□□ 0.38
BRAT1-206ENST00000493232 FAF1Q9UNN5 650 aaPredicted RBP17.45■□□□□ 0.38
BRAT1-206ENST00000493232 PRDM15P57071 1507 aaPredicted RBP17.45■□□□□ 0.38
BRAT1-206ENST00000493232 CDR2Q01850 454 aa17.44■□□□□ 0.38
BRAT1-206ENST00000493232 PDCD2Q16342 344 aaPredicted RBP17.44■□□□□ 0.38
BRAT1-206ENST00000493232 PPP6R3Q5H9R7 873 aaPredicted RBP17.44■□□□□ 0.38
BRAT1-206ENST00000493232 ZBTB18Q99592 522 aa17.44■□□□□ 0.38
BRAT1-206ENST00000493232 CYP26B1Q9NR63 512 aa17.44■□□□□ 0.38
BRAT1-206ENST00000493232 KLHL8Q9P2G9 620 aaPredicted RBP17.44■□□□□ 0.38
BRAT1-206ENST00000493232 KRT38O76015 456 aa17.44■□□□□ 0.38
BRAT1-206ENST00000493232 TMCO4Q5TGY1 634 aa17.44■□□□□ 0.38
BRAT1-206ENST00000493232 TRIM15Q9C019 465 aa17.44■□□□□ 0.38
BRAT1-206ENST00000493232 SLC13A4Q9UKG4 626 aa17.44■□□□□ 0.38
BRAT1-206ENST00000493232 EPHA10Q5JZY3 1008 aa17.44■□□□□ 0.38
BRAT1-206ENST00000493232 TWF2Q6IBS0 349 aaKnown RBP17.44■□□□□ 0.38
BRAT1-206ENST00000493232 ELMOD1Q8N336 334 aa17.44■□□□□ 0.38
BRAT1-206ENST00000493232 FBXL13Q8NEE6 735 aa17.44■□□□□ 0.38
BRAT1-206ENST00000493232 DYDC2Q96IM9 177 aa17.44■□□□□ 0.38
BRAT1-206ENST00000493232 STAP1Q9ULZ2 295 aa17.44■□□□□ 0.38
BRAT1-206ENST00000493232 UBE4BO95155 1302 aa17.44■□□□□ 0.38
BRAT1-206ENST00000493232 GCKP35557 465 aa17.44■□□□□ 0.38
BRAT1-206ENST00000493232 KNOP1Q1ED39 458 aaKnown RBP17.44■□□□□ 0.38
BRAT1-206ENST00000493232 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.44■□□□□ 0.38
BRAT1-206ENST00000493232 MB21D2Q8IYB1 491 aaPredicted RBP17.44■□□□□ 0.38
BRAT1-206ENST00000493232 URGCPQ8TCY9 931 aa17.44■□□□□ 0.38
BRAT1-206ENST00000493232 EXOC4Q96A65 974 aa17.44■□□□□ 0.38
BRAT1-206ENST00000493232 CEP95Q96GE4 821 aa17.44■□□□□ 0.38
BRAT1-206ENST00000493232 UPF3AQ9H1J1 476 aaKnown RBP17.44■□□□□ 0.38
BRAT1-206ENST00000493232 CPDO75976 1380 aa17.44■□□□□ 0.38
BRAT1-206ENST00000493232 TSPOAP1O95153 1857 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 A2ML1A8K2U0 1454 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 C1orf228Q6PIY5 440 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 CYB5R4Q7L1T6 521 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 CRLF3Q8IUI8 442 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 ZBED2Q9BTP6 218 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 MAGEB5Q9BZ81 275 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 SAYSD1Q9NPB0 183 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 ANGPTL2Q9UKU9 493 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 USP17L15C9J2P7 530 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 USP17L13C9JLJ4 530 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 USP17L11C9JVI0 530 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 USP17L18D6R9N7 530 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 USP17L22D6RA61 530 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 USP17L17D6RBQ6 530 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 USP17L19D6RCP7 530 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 USP17L20D6RJB6 530 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 MX2P20592 715 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 YWHAHQ04917 246 aaPredicted RBP17.43■□□□□ 0.38
BRAT1-206ENST00000493232 USP17L24Q0WX57 530 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 CASP8Q14790 479 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 USP17L6PQ6QN14 398 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 CCDC138Q96M89 665 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 SLITRK6Q9H5Y7 841 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 LY9Q9HBG7 655 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 IRAK4Q9NWZ3 460 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 BARHL2Q9NY43 387 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 DENND3A2RUS2 1198 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 HSPA4LO95757 839 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 ESRRAP11474 423 aaPredicted RBP17.43■□□□□ 0.38
BRAT1-206ENST00000493232 NCF2P19878 526 aaPredicted RBP17.43■□□□□ 0.38
BRAT1-206ENST00000493232 GCLMP48507 274 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 PSMC5P62195 406 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 KRT33BQ14525 404 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 KIAA1755Q5JYT7 1200 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 ENOSF1Q7L5Y1 443 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 ABHD10Q9NUJ1 306 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 SUN2Q9UH99 717 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 E9PMD0 336 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 SLC16A4O15374 487 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 PALMO75781 387 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 AP3M2P53677 418 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 OCRLQ01968 901 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 KYAT1Q16773 422 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 GANCQ8TET4 914 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 FAM213AQ9BRX8 229 aa17.43■□□□□ 0.38
BRAT1-206ENST00000493232 COPEO14579 308 aa17.42■□□□□ 0.38
BRAT1-206ENST00000493232 MAPK13O15264 365 aa17.42■□□□□ 0.38
BRAT1-206ENST00000493232 ZNF189O75820 626 aaPredicted RBP17.42■□□□□ 0.38
BRAT1-206ENST00000493232 MYBL1P10243 752 aa17.42■□□□□ 0.38
BRAT1-206ENST00000493232 SPARCL1Q14515 664 aa17.42■□□□□ 0.38
BRAT1-206ENST00000493232 TMEM270Q6UE05 265 aa17.42■□□□□ 0.38
BRAT1-206ENST00000493232 MORC4Q8TE76 937 aa17.42■□□□□ 0.38
BRAT1-206ENST00000493232 ACAD9Q9H845 621 aa17.42■□□□□ 0.38
BRAT1-206ENST00000493232 HPCAL4Q9UM19 191 aa17.42■□□□□ 0.38
BRAT1-206ENST00000493232 SDC4P31431 198 aa17.42■□□□□ 0.38
BRAT1-206ENST00000493232 ACAP3Q96P50 834 aa17.42■□□□□ 0.38
BRAT1-206ENST00000493232 SUGT1Q9Y2Z0 365 aa17.42■□□□□ 0.38
BRAT1-206ENST00000493232 KCNH2Q12809 1159 aa17.42■□□□□ 0.38
BRAT1-206ENST00000493232 KLHL38Q2WGJ6 581 aa17.42■□□□□ 0.38
BRAT1-206ENST00000493232 MRPL4Q9BYD3 311 aaKnown RBP17.42■□□□□ 0.38
BRAT1-206ENST00000493232 SUCLA2Q9P2R7 463 aaPredicted RBP17.42■□□□□ 0.38
BRAT1-206ENST00000493232 ACSL3O95573 720 aa17.42■□□□□ 0.38
BRAT1-206ENST00000493232 VAMP7P51809 220 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms