RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 A0A087WZ62 844 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 LINC01553A4QN01 128 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 PP2D1A8MPX8 630 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 GPR182O15218 404 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 LINC00271P0C7V0 271 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 XRCC6P12956 609 aaKnown RBP eCLIP8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 DARSP14868 501 aaKnown RBP8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 RPA1P27694 616 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 CDC25AP30304 524 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 RFC5P40937 340 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 PRPHP41219 470 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 RARRES1P49788 294 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 FAM189BP81408 668 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 ATP2C1P98194 919 aaPredicted RBP8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 NFX1Q12986 1120 aaKnown RBP8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 PDIA5Q14554 519 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 RILPL1Q5EBL4 403 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 XKR9Q5GH70 373 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 OTUD6AQ7L8S5 288 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 FERMT3Q86UX7 667 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 RHPN2Q8IUC4 686 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 PRPF31Q8WWY3 499 aaKnown RBP8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 ZNF689Q96CS4 500 aaPredicted RBP8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 MAP7D2Q96T17 732 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 ADAM2Q99965 735 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 FDXACB1Q9BRP7 624 aaPredicted RBP8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 ZBED2Q9BTP6 218 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 MMTAG2Q9BU76 263 aaKnown RBP8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 FTHL17Q9BXU8 183 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 IFT122Q9HBG6 1241 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 TUFT1Q9NNX1 390 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 RGS18Q9NS28 235 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 BMP2KQ9NSY1 1161 aaPredicted RBP8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 ANKEF1Q9NU02 776 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 MTMR6Q9Y217 621 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 INSL6Q9Y581 213 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 PTPRSQ13332 1948 aa8.03□□□□□ -1.12
PDLIM1-204ENST00000492511 TTC28Q96AY4 2481 aa8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 C9IYK1 514 aa8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 LAD1O00515 517 aa8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 LPXNO60711 386 aa8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 DGKIO75912 1065 aa8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 ARL2P36404 184 aa8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 GATMP50440 423 aa8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 DNM2P50570 870 aa8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 POLGP54098 1239 aaPredicted RBP8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 ERVK-21P61565 698 aa8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 CDC42EP1Q00587 391 aa8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 RESTQ13127 1097 aa8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 EMC2Q15006 297 aa8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 TJAP1Q5JTD0 557 aa8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 FAM173BQ6P4H8 233 aa8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 POTEGQ6S5H5 508 aa8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 ZNF710Q8N1W2 664 aa8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 ASAP3Q8TDY4 903 aa8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 NLRP7Q8WX94 980 aa8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 SLC7A3Q8WY07 619 aa8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 JPH2Q9BR39 696 aaPredicted RBP8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 MINDY3Q9H8M7 445 aa8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 LRWD1Q9UFC0 647 aa8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 DBR1Q9UK59 544 aaKnown RBP8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 COL4A3BPQ9Y5P4 624 aa8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 COL4A6Q14031 1691 aa8.02□□□□□ -1.13
PDLIM1-204ENST00000492511 VPS37CA5D8V6 355 aaPredicted RBP8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 SRGAP2CP0DJJ0 459 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 PDCP20941 246 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 MUTP22033 750 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 GLRA2P23416 452 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 CCT6AP40227 531 aaKnown RBP8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 SARSP49591 514 aaKnown RBP8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 GRIN1Q05586 938 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 LAMTOR4Q0VGL1 99 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 FAM102BQ5T8I3 360 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 DTHD1Q6ZMT9 781 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 SLC24A5Q71RS6 500 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 KCNK18Q7Z418 384 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 BRAPQ7Z569 592 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 ZNF410Q86VK4 478 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 NPAS4Q8IUM7 802 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 EXOC8Q8IYI6 725 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 ARNTL2Q8WYA1 636 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 PNMA5Q96PV4 448 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 NACC1Q96RE7 527 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 YME1L1Q96TA2 773 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 GAS2L1Q99501 681 aaPredicted RBP8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 MTRQ99707 1265 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 C17orf80Q9BSJ5 609 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 GCOM2Q9BZD3 368 aaPredicted RBP8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 POLD4Q9HCU8 107 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 GPRC5CQ9NQ84 441 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 RNF19AQ9NV58 838 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 CLIC4Q9Y696 253 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 VCANP13611 3396 aa8.01□□□□□ -1.13
PDLIM1-204ENST00000492511 VWA3AA6NCI4 1184 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 E9PMD0 336 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 TNFRSF10AO00220 468 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 ASAP2O43150 1006 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 STX6O43752 255 aa8□□□□□ -1.13
PDLIM1-204ENST00000492511 GAS2O43903 313 aaKnown RBP8□□□□□ -1.13
PDLIM1-204ENST00000492511 USO1O60763 962 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms