RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 WDR72Q3MJ13 1102 aa10.46□□□□□ -0.73
VPS8-225ENST00000492449 C10orf76Q5T2E6 689 aa10.46□□□□□ -0.73
VPS8-225ENST00000492449 INTS8Q75QN2 995 aaKnown RBP10.46□□□□□ -0.73
VPS8-225ENST00000492449 RRAGAQ7L523 313 aa10.46□□□□□ -0.73
VPS8-225ENST00000492449 ATG9AQ7Z3C6 839 aa10.46□□□□□ -0.73
VPS8-225ENST00000492449 SPATA24Q86W54 205 aa10.46□□□□□ -0.73
VPS8-225ENST00000492449 LRRC57Q8N9N7 239 aa10.46□□□□□ -0.73
VPS8-225ENST00000492449 FAM81BQ96LP2 452 aa10.46□□□□□ -0.73
VPS8-225ENST00000492449 MAGEB18Q96M61 343 aa10.46□□□□□ -0.73
VPS8-225ENST00000492449 PHF20Q9BVI0 1012 aa10.46□□□□□ -0.73
VPS8-225ENST00000492449 STX18Q9P2W9 335 aaKnown RBP10.46□□□□□ -0.73
VPS8-225ENST00000492449 UMODL1Q5DID0 1318 aa10.46□□□□□ -0.74
VPS8-225ENST00000492449 RPTORQ8N122 1335 aa10.46□□□□□ -0.74
VPS8-225ENST00000492449 BTBD11A6QL63 1104 aa10.46□□□□□ -0.74
VPS8-225ENST00000492449 KRIT1O00522 736 aa10.46□□□□□ -0.74
VPS8-225ENST00000492449 RGL2O15211 777 aa10.46□□□□□ -0.74
VPS8-225ENST00000492449 T-ENOLP0DO92 83 aa10.46□□□□□ -0.74
VPS8-225ENST00000492449 KRT2P35908 639 aa10.46□□□□□ -0.74
VPS8-225ENST00000492449 RNASE9P60153 205 aaKnown RBP10.46□□□□□ -0.74
VPS8-225ENST00000492449 SLC9C1Q4G0N8 1177 aa10.46□□□□□ -0.74
VPS8-225ENST00000492449 TMEM67Q5HYA8 995 aa10.46□□□□□ -0.74
VPS8-225ENST00000492449 PPFIBP2Q8ND30 876 aa10.46□□□□□ -0.74
VPS8-225ENST00000492449 TNFRSF25Q93038 417 aa10.46□□□□□ -0.74
VPS8-225ENST00000492449 DENND2AQ9ULE3 1009 aa10.46□□□□□ -0.74
VPS8-225ENST00000492449 CHMP2BQ9UQN3 213 aa10.46□□□□□ -0.74
VPS8-225ENST00000492449 FAM187AA6NFU0 413 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 H0Y3Z8 333 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 MAP3K7O43318 606 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 PTPN4P29074 926 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 CCNFP41002 786 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 SERPINB8P50452 374 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 TTLL12Q14166 644 aaPredicted RBP10.45□□□□□ -0.74
VPS8-225ENST00000492449 KHDC1Q4VXA5 237 aaKnown RBP10.45□□□□□ -0.74
VPS8-225ENST00000492449 VSTM1Q6UX27 236 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 TMC4Q7Z404 712 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 PROCA1Q8NCQ7 364 aaPredicted RBP10.45□□□□□ -0.74
VPS8-225ENST00000492449 ERMNQ8TAM6 284 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 AGBL1Q96MI9 1066 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 TUBGCP5Q96RT8 1024 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 METTL22Q9BUU2 404 aaPredicted RBP10.45□□□□□ -0.74
VPS8-225ENST00000492449 UTP6Q9NYH9 597 aaKnown RBP10.45□□□□□ -0.74
VPS8-225ENST00000492449 STARD13Q9Y3M8 1113 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 DCTN3O75935 186 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 HNRNPCP07910 306 aaKnown RBP eCLIP10.45□□□□□ -0.74
VPS8-225ENST00000492449 VCAM1P19320 739 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 EPHB2P29323 1055 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 LONP1P36776 959 aaKnown RBP10.45□□□□□ -0.74
VPS8-225ENST00000492449 RGS2P41220 211 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 PDIA6Q15084 440 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 CCDC6Q16204 474 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 CLPPQ16740 277 aaPredicted RBP10.45□□□□□ -0.74
VPS8-225ENST00000492449 RTN1Q16799 776 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 P3H1Q32P28 736 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 EARS2Q5JPH6 523 aaKnown RBP10.45□□□□□ -0.74
VPS8-225ENST00000492449 ARL6IP4Q66PJ3 421 aaKnown RBP10.45□□□□□ -0.74
VPS8-225ENST00000492449 ANKRD40Q6AI12 368 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 C3orf62Q6ZUJ4 267 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 TMTC2Q8N394 836 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 GFM2Q969S9 779 aaKnown RBP10.45□□□□□ -0.74
VPS8-225ENST00000492449 AP1M1Q9BXS5 423 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 KIAA1683Q9H0B3 1180 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 TIMMDC1Q9NPL8 285 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 INIPQ9NRY2 104 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 PITPNM2Q9BZ72 1349 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 ADAMTS13Q76LX8 1427 aa10.45□□□□□ -0.74
VPS8-225ENST00000492449 FAM205CA6NFA0 338 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 MAGEB2O15479 319 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 GPAA1O43292 621 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 ALDH2P05091 517 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 HARSP12081 509 aaKnown RBP10.44□□□□□ -0.74
VPS8-225ENST00000492449 ALOX15P16050 662 aaPredicted RBP10.44□□□□□ -0.74
VPS8-225ENST00000492449 MLH1P40692 756 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 TRAPPC10P48553 1259 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 PTENP60484 403 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 KCNMA1Q12791 1236 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 PTGDRQ13258 359 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 PRPF4BQ13523 1007 aaKnown RBP10.44□□□□□ -0.74
VPS8-225ENST00000492449 SLC29A2Q14542 456 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 R3HDM1Q15032 1099 aaKnown RBP10.44□□□□□ -0.74
VPS8-225ENST00000492449 PKN1Q16512 942 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 MAN2A1Q16706 1144 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 TTC38Q5R3I4 469 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 SLFN11Q7Z7L1 901 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 VSIG1Q86XK7 387 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 METTL13Q8N6R0 699 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 HAUS1Q96CS2 278 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 SHISA4Q96DD7 197 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 ERP44Q9BS26 406 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 MYL10Q9BUA6 226 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 RNF26Q9BY78 433 aaPredicted RBP10.44□□□□□ -0.74
VPS8-225ENST00000492449 PUS7LQ9H0K6 701 aaKnown RBP10.44□□□□□ -0.74
VPS8-225ENST00000492449 CUEDC2Q9H467 287 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 HAO1Q9UJM8 370 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 CHKBQ9Y259 395 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 STXBP5LQ9Y2K9 1186 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 USH1CQ9Y6N9 552 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 AKAP11Q9UKA4 1901 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.44□□□□□ -0.74
VPS8-225ENST00000492449 B4E1Z4 1266 aa10.44□□□□□ -0.74
VPS8-225ENST00000492449 RASGRF2O14827 1237 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms