RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 MAFO75444 373 aaPredicted RBP16.81■□□□□ 0.28
TOM1-215ENST00000491987 CSPG5O95196 566 aa16.81■□□□□ 0.28
TOM1-215ENST00000491987 DARSP14868 501 aaKnown RBP16.81■□□□□ 0.28
TOM1-215ENST00000491987 FGFR4P22455 802 aa16.81■□□□□ 0.28
TOM1-215ENST00000491987 DNM2P50570 870 aa16.81■□□□□ 0.28
TOM1-215ENST00000491987 NPEPPSP55786 919 aa16.81■□□□□ 0.28
TOM1-215ENST00000491987 SPIRE1Q08AE8 756 aa16.81■□□□□ 0.28
TOM1-215ENST00000491987 CALCRLQ16602 461 aa16.81■□□□□ 0.28
TOM1-215ENST00000491987 ZNF710Q8N1W2 664 aa16.81■□□□□ 0.28
TOM1-215ENST00000491987 DYDC2Q96IM9 177 aa16.81■□□□□ 0.28
TOM1-215ENST00000491987 ZSCAN31Q96LW9 406 aaPredicted RBP16.81■□□□□ 0.28
TOM1-215ENST00000491987 LLPHQ9BRT6 129 aaKnown RBP16.81■□□□□ 0.28
TOM1-215ENST00000491987 CYP26B1Q9NR63 512 aa16.81■□□□□ 0.28
TOM1-215ENST00000491987 CUL9Q8IWT3 2517 aa16.8■□□□□ 0.28
TOM1-215ENST00000491987 KIAA1671Q9BY89 1806 aa16.8■□□□□ 0.28
TOM1-215ENST00000491987 NEMFO60524 1076 aa16.8■□□□□ 0.28
TOM1-215ENST00000491987 BMP1P13497 986 aa16.8■□□□□ 0.28
TOM1-215ENST00000491987 CYP4A11Q02928 519 aa16.8■□□□□ 0.28
TOM1-215ENST00000491987 SAFBQ15424 915 aaKnown RBP eCLIP16.8■□□□□ 0.28
TOM1-215ENST00000491987 TCEAL5Q5H9L2 206 aa16.8■□□□□ 0.28
TOM1-215ENST00000491987 FAM102BQ5T8I3 360 aa16.8■□□□□ 0.28
TOM1-215ENST00000491987 RHPN2Q8IUC4 686 aa16.8■□□□□ 0.28
TOM1-215ENST00000491987 ZNF579Q8NAF0 562 aaKnown RBP16.8■□□□□ 0.28
TOM1-215ENST00000491987 C8orf76Q96K31 380 aa16.8■□□□□ 0.28
TOM1-215ENST00000491987 CEP170P1Q96L14 293 aa16.8■□□□□ 0.28
TOM1-215ENST00000491987 UHRF1Q96T88 793 aaPredicted RBP16.8■□□□□ 0.28
TOM1-215ENST00000491987 LMAN2LQ9H0V9 348 aa16.8■□□□□ 0.28
TOM1-215ENST00000491987 UBE2ZQ9H832 354 aaPredicted RBP16.8■□□□□ 0.28
TOM1-215ENST00000491987 ATP6V0A4Q9HBG4 840 aa16.8■□□□□ 0.28
TOM1-215ENST00000491987 ALG13Q9NP73 1137 aaKnown RBP16.8■□□□□ 0.28
TOM1-215ENST00000491987 BMP2KQ9NSY1 1161 aaPredicted RBP16.8■□□□□ 0.28
TOM1-215ENST00000491987 RNF216Q9NWF9 866 aaPredicted RBP16.8■□□□□ 0.28
TOM1-215ENST00000491987 TMEM161AQ9NX61 479 aa16.8■□□□□ 0.28
TOM1-215ENST00000491987 SUCLA2Q9P2R7 463 aaPredicted RBP16.8■□□□□ 0.28
TOM1-215ENST00000491987 A0A087WZ62 844 aa16.79■□□□□ 0.28
TOM1-215ENST00000491987 TBKBP1A7MCY6 615 aa16.79■□□□□ 0.28
TOM1-215ENST00000491987 CSDE1O75534 798 aaKnown RBP16.79■□□□□ 0.28
TOM1-215ENST00000491987 FGFR1P11362 822 aa16.79■□□□□ 0.28
TOM1-215ENST00000491987 ZSCAN20P17040 1043 aaPredicted RBP16.79■□□□□ 0.28
TOM1-215ENST00000491987 ATP2B1P20020 1258 aa16.79■□□□□ 0.28
TOM1-215ENST00000491987 YWHABP31946 246 aaKnown RBP16.79■□□□□ 0.28
TOM1-215ENST00000491987 RBM25P49756 843 aaKnown RBP16.79■□□□□ 0.28
TOM1-215ENST00000491987 POLGP54098 1239 aaPredicted RBP16.79■□□□□ 0.28
TOM1-215ENST00000491987 FAM189BP81408 668 aa16.79■□□□□ 0.28
TOM1-215ENST00000491987 CTTNQ14247 550 aaKnown RBP16.79■□□□□ 0.28
TOM1-215ENST00000491987 KSR1Q8IVT5 923 aa16.79■□□□□ 0.28
TOM1-215ENST00000491987 C4orf19Q8IY42 314 aa16.79■□□□□ 0.28
TOM1-215ENST00000491987 NLRP4Q96MN2 994 aa16.79■□□□□ 0.28
TOM1-215ENST00000491987 NECAB3Q96P71 396 aaPredicted RBP16.79■□□□□ 0.28
TOM1-215ENST00000491987 JPH2Q9BR39 696 aaPredicted RBP16.79■□□□□ 0.28
TOM1-215ENST00000491987 FDXACB1Q9BRP7 624 aaPredicted RBP16.79■□□□□ 0.28
TOM1-215ENST00000491987 PLVAPQ9BX97 442 aa16.79■□□□□ 0.28
TOM1-215ENST00000491987 GCOM2Q9BZD3 368 aaPredicted RBP16.79■□□□□ 0.28
TOM1-215ENST00000491987 NSUN3Q9H649 340 aaKnown RBP16.79■□□□□ 0.28
TOM1-215ENST00000491987 SH2B1Q9NRF2 756 aaPredicted RBP16.79■□□□□ 0.28
TOM1-215ENST00000491987 PCDHA12Q9UN75 941 aa16.79■□□□□ 0.28
TOM1-215ENST00000491987 TNFRSF10AO00220 468 aa16.78■□□□□ 0.28
TOM1-215ENST00000491987 TXKP42681 527 aa16.78■□□□□ 0.28
TOM1-215ENST00000491987 SPOUT1Q5T280 376 aaKnown RBP16.78■□□□□ 0.28
TOM1-215ENST00000491987 ZNF410Q86VK4 478 aa16.78■□□□□ 0.28
TOM1-215ENST00000491987 TPH2Q8IWU9 490 aa16.78■□□□□ 0.28
TOM1-215ENST00000491987 FAM184AQ8NB25 1140 aa16.78■□□□□ 0.28
TOM1-215ENST00000491987 RNF169Q8NCN4 708 aa16.78■□□□□ 0.28
TOM1-215ENST00000491987 SLC7A3Q8WY07 619 aa16.78■□□□□ 0.28
TOM1-215ENST00000491987 EIF2AK1Q9BQI3 630 aaKnown RBP16.78■□□□□ 0.28
TOM1-215ENST00000491987 ELAC1Q9H777 363 aaKnown RBP16.78■□□□□ 0.28
TOM1-215ENST00000491987 ZSWIM4Q9H7M6 989 aa16.78■□□□□ 0.28
TOM1-215ENST00000491987 TTC12Q9H892 705 aaPredicted RBP16.78■□□□□ 0.28
TOM1-215ENST00000491987 HCSTQ9UBK5 93 aa16.78■□□□□ 0.28
TOM1-215ENST00000491987 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.77■□□□□ 0.28
TOM1-215ENST00000491987 ZBTB39O15060 712 aa16.77■□□□□ 0.28
TOM1-215ENST00000491987 SLITRK3O94933 977 aa16.77■□□□□ 0.28
TOM1-215ENST00000491987 ITGB1P05556 798 aa16.77■□□□□ 0.28
TOM1-215ENST00000491987 KCNA5P22460 613 aa16.77■□□□□ 0.28
TOM1-215ENST00000491987 MCM7P33993 719 aa16.77■□□□□ 0.28
TOM1-215ENST00000491987 HMGN5P82970 282 aaKnown RBP16.77■□□□□ 0.28
TOM1-215ENST00000491987 CDC42EP1Q00587 391 aa16.77■□□□□ 0.28
TOM1-215ENST00000491987 XKR9Q5GH70 373 aa16.77■□□□□ 0.28
TOM1-215ENST00000491987 OTUD6AQ7L8S5 288 aa16.77■□□□□ 0.28
TOM1-215ENST00000491987 ECHDC2Q86YB7 292 aa16.77■□□□□ 0.28
TOM1-215ENST00000491987 KLHL23Q8NBE8 558 aa16.77■□□□□ 0.28
TOM1-215ENST00000491987 P2RX5Q93086 422 aa16.77■□□□□ 0.28
TOM1-215ENST00000491987 TMEM60Q9H2L4 133 aa16.77■□□□□ 0.28
TOM1-215ENST00000491987 DHX33Q9H6R0 707 aaKnown RBP16.77■□□□□ 0.28
TOM1-215ENST00000491987 PLAGL2Q9UPG8 496 aa16.77■□□□□ 0.28
TOM1-215ENST00000491987 PPME1Q9Y570 386 aa16.77■□□□□ 0.28
TOM1-215ENST00000491987 ATG2AQ2TAZ0 1938 aa16.76■□□□□ 0.27
TOM1-215ENST00000491987 SFPQP23246 707 aaKnown RBP eCLIP16.76■□□□□ 0.27
TOM1-215ENST00000491987 DNAJB1P25685 340 aa16.76■□□□□ 0.27
TOM1-215ENST00000491987 RFC5P40937 340 aa16.76■□□□□ 0.27
TOM1-215ENST00000491987 NAALADL2Q58DX5 795 aa16.76■□□□□ 0.27
TOM1-215ENST00000491987 EP400NLQ6ZTU2 488 aa16.76■□□□□ 0.27
TOM1-215ENST00000491987 TMEM143Q96AN5 459 aa16.76■□□□□ 0.27
TOM1-215ENST00000491987 MTMR9Q96QG7 549 aa16.76■□□□□ 0.27
TOM1-215ENST00000491987 RNF19AQ9NV58 838 aa16.76■□□□□ 0.27
TOM1-215ENST00000491987 TYW1Q9NV66 732 aaKnown RBP16.76■□□□□ 0.27
TOM1-215ENST00000491987 COL4A3BPQ9Y5P4 624 aa16.76■□□□□ 0.27
TOM1-215ENST00000491987 FNDC1Q4ZHG4 1894 aaPredicted RBP16.76■□□□□ 0.27
TOM1-215ENST00000491987 ARID2Q68CP9 1835 aa16.75■□□□□ 0.27
TOM1-215ENST00000491987 POTEMA6NI47 508 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms