RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 SMC3Q9UQE7 1217 aa14.26□□□□□ -0.13
SEC61A1-206ENST00000491668 FNDC1Q4ZHG4 1894 aaPredicted RBP14.25□□□□□ -0.13
SEC61A1-206ENST00000491668 BTBD18B2RXH4 712 aa14.25□□□□□ -0.13
SEC61A1-206ENST00000491668 GPR182O15218 404 aa14.25□□□□□ -0.13
SEC61A1-206ENST00000491668 CSDE1O75534 798 aaKnown RBP14.25□□□□□ -0.13
SEC61A1-206ENST00000491668 MMP1P03956 469 aa14.25□□□□□ -0.13
SEC61A1-206ENST00000491668 RB1P06400 928 aa14.25□□□□□ -0.13
SEC61A1-206ENST00000491668 GCFC2P16383 781 aaKnown RBP14.25□□□□□ -0.13
SEC61A1-206ENST00000491668 EIF4BP23588 611 aaKnown RBP14.25□□□□□ -0.13
SEC61A1-206ENST00000491668 DNAJB1P25685 340 aa14.25□□□□□ -0.13
SEC61A1-206ENST00000491668 KRT2P35908 639 aa14.25□□□□□ -0.13
SEC61A1-206ENST00000491668 FOSBP53539 338 aa14.25□□□□□ -0.13
SEC61A1-206ENST00000491668 TBC1D8BQ0IIM8 1120 aa14.25□□□□□ -0.13
SEC61A1-206ENST00000491668 MTERF2Q49AM1 385 aa14.25□□□□□ -0.13
SEC61A1-206ENST00000491668 TCEAL5Q5H9L2 206 aa14.25□□□□□ -0.13
SEC61A1-206ENST00000491668 PLA2G4FQ68DD2 849 aa14.25□□□□□ -0.13
SEC61A1-206ENST00000491668 SLC24A5Q71RS6 500 aa14.25□□□□□ -0.13
SEC61A1-206ENST00000491668 UHRF1Q96T88 793 aaPredicted RBP14.25□□□□□ -0.13
SEC61A1-206ENST00000491668 RNF19AQ9NV58 838 aa14.25□□□□□ -0.13
SEC61A1-206ENST00000491668 AKT3Q9Y243 479 aa14.25□□□□□ -0.13
SEC61A1-206ENST00000491668 DENND3A2RUS2 1198 aa14.24□□□□□ -0.13
SEC61A1-206ENST00000491668 DDX11L8A8MPP1 907 aa14.24□□□□□ -0.13
SEC61A1-206ENST00000491668 TNFRSF10AO00220 468 aa14.24□□□□□ -0.13
SEC61A1-206ENST00000491668 TBX3O15119 743 aa14.24□□□□□ -0.13
SEC61A1-206ENST00000491668 MAFO75444 373 aaPredicted RBP14.24□□□□□ -0.13
SEC61A1-206ENST00000491668 DARSP14868 501 aaKnown RBP14.24□□□□□ -0.13
SEC61A1-206ENST00000491668 IBSPP21815 317 aaPredicted RBP14.24□□□□□ -0.13
SEC61A1-206ENST00000491668 FGFR4P22455 802 aa14.24□□□□□ -0.13
SEC61A1-206ENST00000491668 NPEPPSP55786 919 aa14.24□□□□□ -0.13
SEC61A1-206ENST00000491668 PSMC5P62195 406 aa14.24□□□□□ -0.13
SEC61A1-206ENST00000491668 TRIM29Q14134 588 aa14.24□□□□□ -0.13
SEC61A1-206ENST00000491668 PTPROQ16827 1216 aa14.24□□□□□ -0.13
SEC61A1-206ENST00000491668 AAK1Q2M2I8 961 aa14.24□□□□□ -0.13
SEC61A1-206ENST00000491668 FAM43BQ6ZT52 329 aaPredicted RBP14.24□□□□□ -0.13
SEC61A1-206ENST00000491668 MAP7D2Q96T17 732 aa14.24□□□□□ -0.13
SEC61A1-206ENST00000491668 C11orf84Q9BUA3 381 aaPredicted RBP14.24□□□□□ -0.13
SEC61A1-206ENST00000491668 UBE2ZQ9H832 354 aaPredicted RBP14.24□□□□□ -0.13
SEC61A1-206ENST00000491668 ALG13Q9NP73 1137 aaKnown RBP14.24□□□□□ -0.13
SEC61A1-206ENST00000491668 TSHZ2Q9NRE2 1034 aa14.24□□□□□ -0.13
SEC61A1-206ENST00000491668 C1orf112Q9NSG2 853 aa14.24□□□□□ -0.13
SEC61A1-206ENST00000491668 FOXD4L1Q9NU39 408 aa14.24□□□□□ -0.13
SEC61A1-206ENST00000491668 RGL1Q9NZL6 768 aa14.24□□□□□ -0.13
SEC61A1-206ENST00000491668 PLAGL2Q9UPG8 496 aa14.24□□□□□ -0.13
SEC61A1-206ENST00000491668 ZBTB39O15060 712 aa14.23□□□□□ -0.13
SEC61A1-206ENST00000491668 ITGB1P05556 798 aa14.23□□□□□ -0.13
SEC61A1-206ENST00000491668 STAG3L1P0CL83 205 aa14.23□□□□□ -0.13
SEC61A1-206ENST00000491668 FGFR1P11362 822 aa14.23□□□□□ -0.13
SEC61A1-206ENST00000491668 TMOD1P28289 359 aa14.23□□□□□ -0.13
SEC61A1-206ENST00000491668 QARSP47897 775 aaKnown RBP14.23□□□□□ -0.13
SEC61A1-206ENST00000491668 CUL4AQ13619 759 aa14.23□□□□□ -0.13
SEC61A1-206ENST00000491668 TIGD5Q53EQ6 642 aa14.23□□□□□ -0.13
SEC61A1-206ENST00000491668 KSR1Q8IVT5 923 aa14.23□□□□□ -0.13
SEC61A1-206ENST00000491668 DIS3L2Q8IYB7 885 aaKnown RBP14.23□□□□□ -0.13
SEC61A1-206ENST00000491668 SPRYD3Q8NCJ5 442 aa14.23□□□□□ -0.13
SEC61A1-206ENST00000491668 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.23□□□□□ -0.13
SEC61A1-206ENST00000491668 SPPL3Q8TCT6 385 aa14.23□□□□□ -0.13
SEC61A1-206ENST00000491668 PLVAPQ9BX97 442 aa14.23□□□□□ -0.13
SEC61A1-206ENST00000491668 CYP26B1Q9NR63 512 aa14.23□□□□□ -0.13
SEC61A1-206ENST00000491668 RWDD3Q9Y3V2 267 aa14.23□□□□□ -0.13
SEC61A1-206ENST00000491668 PCDHB7Q9Y5E2 793 aa14.23□□□□□ -0.13
SEC61A1-206ENST00000491668 ATF7P17544 494 aaPredicted RBP14.22□□□□□ -0.13
SEC61A1-206ENST00000491668 KCNA5P22460 613 aa14.22□□□□□ -0.13
SEC61A1-206ENST00000491668 GJB2P29033 226 aa14.22□□□□□ -0.13
SEC61A1-206ENST00000491668 LTBRP36941 435 aa14.22□□□□□ -0.13
SEC61A1-206ENST00000491668 EPHA7Q15375 998 aa14.22□□□□□ -0.13
SEC61A1-206ENST00000491668 LRRC55Q6ZSA7 311 aa14.22□□□□□ -0.13
SEC61A1-206ENST00000491668 KLHL23Q8NBE8 558 aa14.22□□□□□ -0.13
SEC61A1-206ENST00000491668 NEK9Q8TD19 979 aa14.22□□□□□ -0.13
SEC61A1-206ENST00000491668 P2RX5Q93086 422 aa14.22□□□□□ -0.13
SEC61A1-206ENST00000491668 INTS4Q96HW7 963 aaKnown RBP14.22□□□□□ -0.13
SEC61A1-206ENST00000491668 MTMR9Q96QG7 549 aa14.22□□□□□ -0.13
SEC61A1-206ENST00000491668 LXNQ9BS40 222 aa14.22□□□□□ -0.13
SEC61A1-206ENST00000491668 NSUN3Q9H649 340 aaKnown RBP14.22□□□□□ -0.13
SEC61A1-206ENST00000491668 TMEM161AQ9NX61 479 aa14.22□□□□□ -0.13
SEC61A1-206ENST00000491668 LRFN2Q9ULH4 789 aa14.22□□□□□ -0.13
SEC61A1-206ENST00000491668 RBM19Q9Y4C8 960 aaKnown RBP14.22□□□□□ -0.13
SEC61A1-206ENST00000491668 PLXNA4Q9HCM2 1894 aa14.22□□□□□ -0.13
SEC61A1-206ENST00000491668 TRIOO75962 3097 aa14.22□□□□□ -0.13
SEC61A1-206ENST00000491668 A0A087WZ62 844 aa14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 TBKBP1A7MCY6 615 aa14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 SLITRK3O94933 977 aa14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 P4HBP07237 508 aaKnown RBP14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 GTF2F1P35269 517 aaKnown RBP eCLIP14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 IRS1P35568 1242 aa14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 GUCY1B3Q02153 619 aa14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 HYAL1Q12794 435 aa14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 CTTNQ14247 550 aaKnown RBP14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 CTC1Q2NKJ3 1217 aa14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 LEXMQ3ZCV2 418 aa14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 CLLU1OSQ5K130 101 aa14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 ODR4Q5SWX8 454 aa14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 NCAPH2Q6IBW4 605 aa14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 ZNF598Q86UK7 904 aaKnown RBP14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 C4orf19Q8IY42 314 aa14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 ZNF710Q8N1W2 664 aa14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 NLRP7Q8WX94 980 aa14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 DYDC2Q96IM9 177 aa14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 CASD1Q96PB1 797 aa14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 NAP1L4Q99733 375 aaKnown RBP14.21□□□□□ -0.13
SEC61A1-206ENST00000491668 HSD17B14Q9BPX1 270 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms