RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 SRGAP2BP0DMP2 458 aa15.03■□□□□ -0
USF1-206ENST00000491629 ADCY7P51828 1080 aa15.03■□□□□ -0
USF1-206ENST00000491629 NLRP11P59045 1033 aaKnown RBP15.03■□□□□ -0
USF1-206ENST00000491629 MTMR3Q13615 1198 aa15.03■□□□□ -0
USF1-206ENST00000491629 NECTIN1Q15223 517 aa15.03■□□□□ -0
USF1-206ENST00000491629 ODR4Q5SWX8 454 aa15.03■□□□□ -0
USF1-206ENST00000491629 APOA5Q6Q788 366 aa15.03■□□□□ -0
USF1-206ENST00000491629 TMEM173Q86WV6 379 aaPredicted RBP15.03■□□□□ -0
USF1-206ENST00000491629 PLA2G4DQ86XP0 818 aa15.03■□□□□ -0
USF1-206ENST00000491629 UBALD2Q8IYN6 164 aa15.03■□□□□ -0
USF1-206ENST00000491629 LRRC43Q8N309 656 aa15.03■□□□□ -0
USF1-206ENST00000491629 METTL13Q8N6R0 699 aa15.03■□□□□ -0
USF1-206ENST00000491629 BBXQ8WY36 941 aaPredicted RBP15.03■□□□□ -0
USF1-206ENST00000491629 CASP10Q92851 521 aa15.03■□□□□ -0
USF1-206ENST00000491629 IRF2BPLQ9H1B7 796 aa15.03■□□□□ -0
USF1-206ENST00000491629 FAM217BQ9NTX9 383 aaPredicted RBP15.03■□□□□ -0
USF1-206ENST00000491629 RNF216Q9NWF9 866 aaPredicted RBP15.03■□□□□ -0
USF1-206ENST00000491629 SPG21Q9NZD8 308 aa15.03■□□□□ -0
USF1-206ENST00000491629 BRPF3Q9ULD4 1205 aa15.03■□□□□ -0
USF1-206ENST00000491629 NR2E1Q9Y466 385 aa15.03■□□□□ -0
USF1-206ENST00000491629 FANCMQ8IYD8 2048 aa15.03■□□□□ -0
USF1-206ENST00000491629 SMCO2A6NFE2 343 aa15.02■□□□□ -0
USF1-206ENST00000491629 IPO5O00410 1097 aaKnown RBP15.02■□□□□ -0
USF1-206ENST00000491629 FGFR4P22455 802 aa15.02■□□□□ -0
USF1-206ENST00000491629 ITIH3Q06033 890 aa15.02■□□□□ -0
USF1-206ENST00000491629 CREB3L3Q68CJ9 461 aa15.02■□□□□ -0
USF1-206ENST00000491629 PPP1R18Q6NYC8 613 aa15.02■□□□□ -0
USF1-206ENST00000491629 MIS18BP1Q6P0N0 1132 aa15.02■□□□□ -0
USF1-206ENST00000491629 LRRC71Q8N4P6 559 aa15.02■□□□□ -0
USF1-206ENST00000491629 HELQQ8TDG4 1101 aa15.02■□□□□ -0
USF1-206ENST00000491629 AUTS2Q8WXX7 1259 aa15.02■□□□□ -0
USF1-206ENST00000491629 LIMD1Q9UGP4 676 aa15.02■□□□□ -0
USF1-206ENST00000491629 V9GY48 417 aaPredicted RBP15.02■□□□□ -0
USF1-206ENST00000491629 MTCL1Q9Y4B5 1905 aaKnown RBP15.02□□□□□ -0.01
USF1-206ENST00000491629 CEP250Q9BV73 2442 aa15.01□□□□□ -0.01
USF1-206ENST00000491629 EDIL3O43854 480 aa15.01□□□□□ -0.01
USF1-206ENST00000491629 ZNF862O60290 1169 aa15.01□□□□□ -0.01
USF1-206ENST00000491629 CYP3A4P08684 503 aa15.01□□□□□ -0.01
USF1-206ENST00000491629 EPCAMP16422 314 aa15.01□□□□□ -0.01
USF1-206ENST00000491629 EIF4BP23588 611 aaKnown RBP15.01□□□□□ -0.01
USF1-206ENST00000491629 PPM1AP35813 382 aa15.01□□□□□ -0.01
USF1-206ENST00000491629 AP3B2Q13367 1082 aa15.01□□□□□ -0.01
USF1-206ENST00000491629 SMC1AQ14683 1233 aaKnown RBP15.01□□□□□ -0.01
USF1-206ENST00000491629 TPRNQ4KMQ1 711 aa15.01□□□□□ -0.01
USF1-206ENST00000491629 RARS2Q5T160 578 aaKnown RBP15.01□□□□□ -0.01
USF1-206ENST00000491629 JAKMIP3Q5VZ66 844 aa15.01□□□□□ -0.01
USF1-206ENST00000491629 CWF19L1Q69YN2 538 aaKnown RBP15.01□□□□□ -0.01
USF1-206ENST00000491629 ASTLQ6HA08 431 aaPredicted RBP15.01□□□□□ -0.01
USF1-206ENST00000491629 FRMD5Q7Z6J6 570 aa15.01□□□□□ -0.01
USF1-206ENST00000491629 BCL7CQ8WUZ0 217 aaPredicted RBP15.01□□□□□ -0.01
USF1-206ENST00000491629 TCEANC2Q96MN5 208 aa15.01□□□□□ -0.01
USF1-206ENST00000491629 ZBP1Q9H171 429 aa15.01□□□□□ -0.01
USF1-206ENST00000491629 BARHL2Q9NY43 387 aa15.01□□□□□ -0.01
USF1-206ENST00000491629 A0A0U1RQF3 1178 aa15□□□□□ -0.01
USF1-206ENST00000491629 HOXA2O43364 376 aa15□□□□□ -0.01
USF1-206ENST00000491629 PI15O43692 258 aa15□□□□□ -0.01
USF1-206ENST00000491629 B4GALT3O60512 393 aa15□□□□□ -0.01
USF1-206ENST00000491629 CSDE1O75534 798 aaKnown RBP15□□□□□ -0.01
USF1-206ENST00000491629 NPR3P17342 541 aa15□□□□□ -0.01
USF1-206ENST00000491629 CDC27P30260 824 aa15□□□□□ -0.01
USF1-206ENST00000491629 ZNF76P36508 570 aa15□□□□□ -0.01
USF1-206ENST00000491629 GPC3P51654 580 aa15□□□□□ -0.01
USF1-206ENST00000491629 BCAR1P56945 870 aa15□□□□□ -0.01
USF1-206ENST00000491629 EXOSC10Q01780 885 aaKnown RBP15□□□□□ -0.01
USF1-206ENST00000491629 KRT17Q04695 432 aa15□□□□□ -0.01
USF1-206ENST00000491629 ZNF746Q6NUN9 644 aaPredicted RBP15□□□□□ -0.01
USF1-206ENST00000491629 EFCAB12Q6NXP0 572 aa15□□□□□ -0.01
USF1-206ENST00000491629 TEX2Q8IWB9 1127 aa15□□□□□ -0.01
USF1-206ENST00000491629 ZDHHC14Q8IZN3 488 aa15□□□□□ -0.01
USF1-206ENST00000491629 RNF169Q8NCN4 708 aa15□□□□□ -0.01
USF1-206ENST00000491629 SLC22A17Q8WUG5 538 aa15□□□□□ -0.01
USF1-206ENST00000491629 LENG9Q96B70 501 aa15□□□□□ -0.01
USF1-206ENST00000491629 NECTIN4Q96NY8 510 aa15□□□□□ -0.01
USF1-206ENST00000491629 VN1R3Q9BXE9 311 aa15□□□□□ -0.01
USF1-206ENST00000491629 GABBR1Q9UBS5 961 aa15□□□□□ -0.01
USF1-206ENST00000491629 AKT3Q9Y243 479 aa15□□□□□ -0.01
USF1-206ENST00000491629 OTOGLQ3ZCN5 2332 aa15□□□□□ -0.01
USF1-206ENST00000491629 CACNA1IQ9P0X4 2223 aa15□□□□□ -0.01
USF1-206ENST00000491629 MEIS3P2A8K0S8 358 aa14.99□□□□□ -0.01
USF1-206ENST00000491629 CXCL14O95715 111 aa14.99□□□□□ -0.01
USF1-206ENST00000491629 DARSP14868 501 aaKnown RBP14.99□□□□□ -0.01
USF1-206ENST00000491629 MTHFRP42898 656 aa14.99□□□□□ -0.01
USF1-206ENST00000491629 METAP2P50579 478 aaKnown RBP eCLIP14.99□□□□□ -0.01
USF1-206ENST00000491629 DRP2Q13474 957 aa14.99□□□□□ -0.01
USF1-206ENST00000491629 UGCGQ16739 394 aa14.99□□□□□ -0.01
USF1-206ENST00000491629 KIAA1841Q6NSI8 718 aa14.99□□□□□ -0.01
USF1-206ENST00000491629 CES5AQ6NT32 575 aa14.99□□□□□ -0.01
USF1-206ENST00000491629 CKAP2LQ8IYA6 745 aa14.99□□□□□ -0.01
USF1-206ENST00000491629 ZNF577Q9BSK1 485 aa14.99□□□□□ -0.01
USF1-206ENST00000491629 PCDHA10Q9Y5I2 948 aa14.99□□□□□ -0.01
USF1-206ENST00000491629 EOMESO95936 686 aa14.98□□□□□ -0.01
USF1-206ENST00000491629 ZSCAN20P17040 1043 aaPredicted RBP14.98□□□□□ -0.01
USF1-206ENST00000491629 RTN1Q16799 776 aa14.98□□□□□ -0.01
USF1-206ENST00000491629 ABI1Q8IZP0 508 aa14.98□□□□□ -0.01
USF1-206ENST00000491629 VPS52Q8N1B4 723 aa14.98□□□□□ -0.01
USF1-206ENST00000491629 CEP89Q96ST8 783 aa14.98□□□□□ -0.01
USF1-206ENST00000491629 ESYT1Q9BSJ8 1104 aa14.98□□□□□ -0.01
USF1-206ENST00000491629 TBC1D22BQ9NU19 505 aa14.98□□□□□ -0.01
USF1-206ENST00000491629 RBM28Q9NW13 759 aaKnown RBP14.98□□□□□ -0.01
USF1-206ENST00000491629 IRAK3Q9Y616 596 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms