RNA–Protein interactions for RNA: ENST00000491052.5

LIMK1-207, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-207ENST00000491052 RPS6KA5O75582 802 aa14.28□□□□□ -0.12
LIMK1-207ENST00000491052 ATP2A2P16615 1042 aaKnown RBP14.28□□□□□ -0.12
LIMK1-207ENST00000491052 NASPP49321 788 aaPredicted RBP14.28□□□□□ -0.12
LIMK1-207ENST00000491052 WDR5P61964 334 aaKnown RBP14.28□□□□□ -0.12
LIMK1-207ENST00000491052 SLC39A14Q15043 492 aa14.28□□□□□ -0.12
LIMK1-207ENST00000491052 FAM109BQ6ICB4 259 aaPredicted RBP14.28□□□□□ -0.12
LIMK1-207ENST00000491052 KSR1Q8IVT5 923 aa14.28□□□□□ -0.12
LIMK1-207ENST00000491052 ZNF710Q8N1W2 664 aa14.28□□□□□ -0.12
LIMK1-207ENST00000491052 TMEM40Q8WWA1 233 aa14.28□□□□□ -0.12
LIMK1-207ENST00000491052 LRCH3Q96II8 777 aa14.28□□□□□ -0.12
LIMK1-207ENST00000491052 SLC9A7Q96T83 725 aa14.28□□□□□ -0.12
LIMK1-207ENST00000491052 BHMT2Q9H2M3 363 aa14.28□□□□□ -0.12
LIMK1-207ENST00000491052 ADAMTS10Q9H324 1103 aa14.28□□□□□ -0.12
LIMK1-207ENST00000491052 XPNPEP1Q9NQW7 623 aa14.28□□□□□ -0.12
LIMK1-207ENST00000491052 FBXO2Q9UK22 296 aaPredicted RBP14.28□□□□□ -0.12
LIMK1-207ENST00000491052 PADI3Q9ULW8 664 aa14.28□□□□□ -0.12
LIMK1-207ENST00000491052 NOC2LQ9Y3T9 749 aaKnown RBP14.28□□□□□ -0.12
LIMK1-207ENST00000491052 COL4A3BPQ9Y5P4 624 aa14.28□□□□□ -0.12
LIMK1-207ENST00000491052 SQORQ9Y6N5 450 aa14.28□□□□□ -0.12
LIMK1-207ENST00000491052 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.27□□□□□ -0.13
LIMK1-207ENST00000491052 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.27□□□□□ -0.13
LIMK1-207ENST00000491052 GRXCR1A8MXD5 290 aa14.27□□□□□ -0.13
LIMK1-207ENST00000491052 E9PMD0 336 aa14.27□□□□□ -0.13
LIMK1-207ENST00000491052 BRD1O95696 1058 aa14.27□□□□□ -0.13
LIMK1-207ENST00000491052 ANP32AP39687 249 aaKnown RBP14.27□□□□□ -0.13
LIMK1-207ENST00000491052 FXR1P51114 621 aaKnown RBP eCLIP14.27□□□□□ -0.13
LIMK1-207ENST00000491052 DEFB103AP81534 67 aa14.27□□□□□ -0.13
LIMK1-207ENST00000491052 NFX1Q12986 1120 aaKnown RBP14.27□□□□□ -0.13
LIMK1-207ENST00000491052 ODR4Q5SWX8 454 aa14.27□□□□□ -0.13
LIMK1-207ENST00000491052 PADI6Q6TGC4 694 aa14.27□□□□□ -0.13
LIMK1-207ENST00000491052 MAEAQ7L5Y9 396 aa14.27□□□□□ -0.13
LIMK1-207ENST00000491052 PRPF31Q8WWY3 499 aaKnown RBP14.27□□□□□ -0.13
LIMK1-207ENST00000491052 CALML4Q96GE6 196 aa14.27□□□□□ -0.13
LIMK1-207ENST00000491052 CLIC6Q96NY7 704 aa14.27□□□□□ -0.13
LIMK1-207ENST00000491052 PNMA5Q96PV4 448 aa14.27□□□□□ -0.13
LIMK1-207ENST00000491052 NT5C3AQ9H0P0 336 aa14.27□□□□□ -0.13
LIMK1-207ENST00000491052 CSRNP2Q9H175 543 aa14.27□□□□□ -0.13
LIMK1-207ENST00000491052 POLR3FQ9H1D9 316 aaPredicted RBP14.27□□□□□ -0.13
LIMK1-207ENST00000491052 DNM3Q9UQ16 869 aa14.27□□□□□ -0.13
LIMK1-207ENST00000491052 SRPRBQ9Y5M8 271 aaKnown RBP14.27□□□□□ -0.13
LIMK1-207ENST00000491052 RALGAPA2Q2PPJ7 1873 aa14.27□□□□□ -0.13
LIMK1-207ENST00000491052 A0A087WZ62 844 aa14.26□□□□□ -0.13
LIMK1-207ENST00000491052 GPR182O15218 404 aa14.26□□□□□ -0.13
LIMK1-207ENST00000491052 SPTLC2O15270 562 aa14.26□□□□□ -0.13
LIMK1-207ENST00000491052 YEATS4O95619 227 aa14.26□□□□□ -0.13
LIMK1-207ENST00000491052 EYA4O95677 639 aa14.26□□□□□ -0.13
LIMK1-207ENST00000491052 AMHP03971 560 aa14.26□□□□□ -0.13
LIMK1-207ENST00000491052 SSBP05455 408 aaKnown RBP eCLIP14.26□□□□□ -0.13
LIMK1-207ENST00000491052 SRGAP2CP0DJJ0 459 aa14.26□□□□□ -0.13
LIMK1-207ENST00000491052 DARSP14868 501 aaKnown RBP14.26□□□□□ -0.13
LIMK1-207ENST00000491052 SMAD3P84022 425 aaKnown RBP14.26□□□□□ -0.13
LIMK1-207ENST00000491052 CDC42EP1Q00587 391 aa14.26□□□□□ -0.13
LIMK1-207ENST00000491052 DNM1Q05193 864 aaKnown RBP14.26□□□□□ -0.13
LIMK1-207ENST00000491052 LAMTOR4Q0VGL1 99 aa14.26□□□□□ -0.13
LIMK1-207ENST00000491052 GRB10Q13322 594 aa14.26□□□□□ -0.13
LIMK1-207ENST00000491052 SPECC1Q5M775 1068 aa14.26□□□□□ -0.13
LIMK1-207ENST00000491052 HYIQ5T013 277 aa14.26□□□□□ -0.13
LIMK1-207ENST00000491052 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.26□□□□□ -0.13
LIMK1-207ENST00000491052 KCNK18Q7Z418 384 aa14.26□□□□□ -0.13
LIMK1-207ENST00000491052 ZNF410Q86VK4 478 aa14.26□□□□□ -0.13
LIMK1-207ENST00000491052 FAM228AQ86W67 206 aa14.26□□□□□ -0.13
LIMK1-207ENST00000491052 MYOCDQ8IZQ8 938 aa14.26□□□□□ -0.13
LIMK1-207ENST00000491052 KRI1Q8N9T8 703 aaKnown RBP14.26□□□□□ -0.13
LIMK1-207ENST00000491052 LINC00301Q8NCQ3 95 aa14.26□□□□□ -0.13
LIMK1-207ENST00000491052 MCPH1Q8NEM0 835 aa14.26□□□□□ -0.13
LIMK1-207ENST00000491052 FDXACB1Q9BRP7 624 aaPredicted RBP14.26□□□□□ -0.13
LIMK1-207ENST00000491052 GCOM2Q9BZD3 368 aaPredicted RBP14.26□□□□□ -0.13
LIMK1-207ENST00000491052 ERVK-5Q9HDB9 667 aa14.26□□□□□ -0.13
LIMK1-207ENST00000491052 ST3GAL5Q9UNP4 418 aa14.26□□□□□ -0.13
LIMK1-207ENST00000491052 ZDHHC9Q9Y397 364 aa14.26□□□□□ -0.13
LIMK1-207ENST00000491052 SLC26A4O43511 780 aa14.25□□□□□ -0.13
LIMK1-207ENST00000491052 NCLP19338 710 aaKnown RBP14.25□□□□□ -0.13
LIMK1-207ENST00000491052 IBSPP21815 317 aaPredicted RBP14.25□□□□□ -0.13
LIMK1-207ENST00000491052 EIF4BP23588 611 aaKnown RBP14.25□□□□□ -0.13
LIMK1-207ENST00000491052 TXLNAP40222 546 aa14.25□□□□□ -0.13
LIMK1-207ENST00000491052 RABGGTBP53611 331 aa14.25□□□□□ -0.13
LIMK1-207ENST00000491052 MXD4Q14582 209 aaPredicted RBP14.25□□□□□ -0.13
LIMK1-207ENST00000491052 KARSQ15046 597 aaKnown RBP14.25□□□□□ -0.13
LIMK1-207ENST00000491052 TMEM119Q4V9L6 283 aa14.25□□□□□ -0.13
LIMK1-207ENST00000491052 FAM102BQ5T8I3 360 aa14.25□□□□□ -0.13
LIMK1-207ENST00000491052 ATL3Q6DD88 541 aa14.25□□□□□ -0.13
LIMK1-207ENST00000491052 FAM117BQ6P1L5 589 aa14.25□□□□□ -0.13
LIMK1-207ENST00000491052 TMCO2Q7Z6W1 182 aaPredicted RBP14.25□□□□□ -0.13
LIMK1-207ENST00000491052 HERC6Q8IVU3 1022 aa14.25□□□□□ -0.13
LIMK1-207ENST00000491052 RNF149Q8NC42 400 aa14.25□□□□□ -0.13
LIMK1-207ENST00000491052 ASAP3Q8TDY4 903 aa14.25□□□□□ -0.13
LIMK1-207ENST00000491052 SYMPKQ92797 1274 aaKnown RBP14.25□□□□□ -0.13
LIMK1-207ENST00000491052 FTHL17Q9BXU8 183 aa14.25□□□□□ -0.13
LIMK1-207ENST00000491052 GPRC5CQ9NQ84 441 aa14.25□□□□□ -0.13
LIMK1-207ENST00000491052 MORC2Q9Y6X9 1032 aaPredicted RBP14.25□□□□□ -0.13
LIMK1-207ENST00000491052 COL4A4P53420 1690 aaPredicted RBP14.24□□□□□ -0.13
LIMK1-207ENST00000491052 TRIP11Q15643 1979 aa14.24□□□□□ -0.13
LIMK1-207ENST00000491052 TDRD15B5MCY1 1934 aaKnown RBP14.24□□□□□ -0.13
LIMK1-207ENST00000491052 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.24□□□□□ -0.13
LIMK1-207ENST00000491052 ASAP2O43150 1006 aa14.24□□□□□ -0.13
LIMK1-207ENST00000491052 CSDE1O75534 798 aaKnown RBP14.24□□□□□ -0.13
LIMK1-207ENST00000491052 CYP11B2P19099 503 aa14.24□□□□□ -0.13
LIMK1-207ENST00000491052 PLCG1P19174 1290 aa14.24□□□□□ -0.13
LIMK1-207ENST00000491052 FGFR4P22455 802 aa14.24□□□□□ -0.13
LIMK1-207ENST00000491052 SFPQP23246 707 aaKnown RBP eCLIP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms