RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 PARD6AQ9NPB6 346 aa8.33□□□□□ -1.08
PDLIM1-203ENST00000490391 GPCPD1Q9NPB8 672 aa8.33□□□□□ -1.08
PDLIM1-203ENST00000490391 TMEM260Q9NX78 707 aa8.33□□□□□ -1.08
PDLIM1-203ENST00000490391 NCDNQ9UBB6 729 aa8.33□□□□□ -1.08
PDLIM1-203ENST00000490391 FBXL21Q9UKT6 434 aa8.33□□□□□ -1.08
PDLIM1-203ENST00000490391 LZTS1Q9Y250 596 aa8.33□□□□□ -1.08
PDLIM1-203ENST00000490391 PCDHB12Q9Y5F1 795 aa8.33□□□□□ -1.08
PDLIM1-203ENST00000490391 MYO18BQ8IUG5 2567 aa8.33□□□□□ -1.08
PDLIM1-203ENST00000490391 DOCK8Q8NF50 2099 aa8.33□□□□□ -1.08
PDLIM1-203ENST00000490391 FRMPD2Q68DX3 1309 aaPredicted RBP8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 TENM4Q6N022 2769 aa8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 SPTLC1O15269 473 aa8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 IPO8O15397 1037 aaKnown RBP8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 GPAA1O43292 621 aa8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 DCNP07585 359 aaKnown RBP8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 NR3C2P08235 984 aa8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 GNAT1P11488 350 aa8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 SCG2P13521 617 aa8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 EIF2AK2P19525 551 aaKnown RBP8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 PMLP29590 882 aa8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 PLCB3Q01970 1234 aa8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 DMWDQ09019 674 aa8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 NR5A1Q13285 461 aa8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 USH1GQ495M9 461 aa8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 ZSCAN25Q6NSZ9 544 aa8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 TRIM50Q86XT4 487 aa8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 IFNL3Q8IZI9 196 aa8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 CLASRPQ8N2M8 674 aaKnown RBP8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 C12orf76Q8N812 135 aaPredicted RBP8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 COLGALT1Q8NBJ5 622 aa8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 MRPS27Q92552 414 aaKnown RBP8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 GPKOWQ92917 476 aaPredicted RBP eCLIP8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 TCF25Q9BQ70 676 aa8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 TBC1D17Q9HA65 648 aa8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 NGRNQ9NPE2 291 aaKnown RBP8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 PXMP2Q9NR77 195 aa8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 WNT16Q9UBV4 365 aa8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 ANGPTL2Q9UKU9 493 aa8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 CFAP46Q8IYW2 2715 aa8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 DOCK5Q9H7D0 1870 aa8.32□□□□□ -1.08
PDLIM1-203ENST00000490391 C2orf16Q68DN1 1984 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 CCDC171Q6TFL3 1326 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 PATJQ8NI35 1801 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 M0R2C6 588 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 SLC30A4O14863 429 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 ITGB2P05107 769 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 IFIT2P09913 472 aaKnown RBP8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 STAG3L1P0CL83 205 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 SNHG28P0DPA3 235 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 PDHBP11177 359 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 SHC2P98077 582 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 ARHGAP4P98171 946 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 PPARAQ07869 468 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 ZNF528Q3MIS6 628 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 SPECC1Q5M775 1068 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 RARS2Q5T160 578 aaKnown RBP8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 SMYD5Q6GMV2 418 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 PHLDB3Q6NSJ2 640 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 TAF2Q6P1X5 1199 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 THNSL1Q8IYQ7 743 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 Q8N3U1 123 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 TMEM47Q9BQJ4 181 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 FTHL17Q9BXU8 183 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 TMX1Q9H3N1 280 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 CWH43Q9H720 699 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 ENTPD7Q9NQZ7 604 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 DBR1Q9UK59 544 aaKnown RBP8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 SMG5Q9UPR3 1016 aaKnown RBP8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 TELO2Q9Y4R8 837 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 CDY2AQ9Y6F7 541 aa8.31□□□□□ -1.08
PDLIM1-203ENST00000490391 NRCAMQ92823 1304 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 MBLAC1A4D2B0 266 aaPredicted RBP8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 C2orf71A6NGG8 1288 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 TSPY2A6NKD2 308 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 PATL2C9JE40 543 aaKnown RBP8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 CLASP2O75122 1294 aaKnown RBP8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 PROS1P07225 676 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 TGFB3P10600 412 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 GNAT2P19087 354 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 GHRHRQ02643 423 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 ZNF543Q08ER8 600 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 ATAT1Q5SQI0 421 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 ARHGEF16Q5VV41 709 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 XRRA1Q6P2D8 792 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 KCNV1Q6PIU1 500 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 KRTAP1-3Q8IUG1 177 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 ZBTB44Q8NCP5 570 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 IL31RAQ8NI17 732 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 APPBP2Q92624 585 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 NELL1Q92832 810 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 KIF1BPQ96EK5 621 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 BORCS6Q96GS4 357 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 PDCD2LQ9BRP1 358 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 USP26Q9BXU7 913 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 EPC1Q9H2F5 836 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 CPVLQ9H3G5 476 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 TYW1Q9NV66 732 aaKnown RBP8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 PADI3Q9ULW8 664 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 USP18Q9UMW8 372 aa8.3□□□□□ -1.08
PDLIM1-203ENST00000490391 PCDHGA2Q9Y5H1 932 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms