RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-206ENST00000490101 ZSWIM4Q9H7M6 989 aa20.21■□□□□ 0.83
SRM-206ENST00000490101 SAMM50Q9Y512 469 aa20.21■□□□□ 0.83
SRM-206ENST00000490101 MUC3AQ02505 3323 aa20.2■□□□□ 0.82
SRM-206ENST00000490101 BAIAP3O94812 1187 aa20.2■□□□□ 0.82
SRM-206ENST00000490101 PSAPP07602 524 aa20.2■□□□□ 0.82
SRM-206ENST00000490101 PRR29P0C7W0 189 aa20.2■□□□□ 0.82
SRM-206ENST00000490101 CKBP12277 381 aa20.2■□□□□ 0.82
SRM-206ENST00000490101 QARSP47897 775 aaKnown RBP20.2■□□□□ 0.82
SRM-206ENST00000490101 ZNF200P98182 395 aaPredicted RBP20.2■□□□□ 0.82
SRM-206ENST00000490101 AMPD3Q01432 767 aa20.2■□□□□ 0.82
SRM-206ENST00000490101 DPYDQ12882 1025 aa20.2■□□□□ 0.82
SRM-206ENST00000490101 CTTNQ14247 550 aaKnown RBP20.2■□□□□ 0.82
SRM-206ENST00000490101 MCM6Q14566 821 aa20.2■□□□□ 0.82
SRM-206ENST00000490101 NT5DC1Q5TFE4 455 aa20.2■□□□□ 0.82
SRM-206ENST00000490101 MIS18BP1Q6P0N0 1132 aa20.2■□□□□ 0.82
SRM-206ENST00000490101 TMCO2Q7Z6W1 182 aaPredicted RBP20.2■□□□□ 0.82
SRM-206ENST00000490101 NACC1Q96RE7 527 aa20.2■□□□□ 0.82
SRM-206ENST00000490101 LXNQ9BS40 222 aa20.2■□□□□ 0.82
SRM-206ENST00000490101 FUCA2Q9BTY2 467 aa20.2■□□□□ 0.82
SRM-206ENST00000490101 LRRC27Q9C0I9 530 aa20.2■□□□□ 0.82
SRM-206ENST00000490101 MLXIPQ9HAP2 919 aa20.2■□□□□ 0.82
SRM-206ENST00000490101 PCDHA5Q9Y5H7 936 aa20.2■□□□□ 0.82
SRM-206ENST00000490101 XIRP2A4UGR9 3374 aa20.2■□□□□ 0.82
SRM-206ENST00000490101 E9PMD0 336 aa20.19■□□□□ 0.82
SRM-206ENST00000490101 HAS3O00219 553 aa20.19■□□□□ 0.82
SRM-206ENST00000490101 ARHGEF15O94989 841 aa20.19■□□□□ 0.82
SRM-206ENST00000490101 SMC2O95347 1197 aa20.19■□□□□ 0.82
SRM-206ENST00000490101 EYA4O95677 639 aa20.19■□□□□ 0.82
SRM-206ENST00000490101 SARSP49591 514 aaKnown RBP20.19■□□□□ 0.82
SRM-206ENST00000490101 PSMC5P62195 406 aa20.19■□□□□ 0.82
SRM-206ENST00000490101 PTK7Q13308 1070 aa20.19■□□□□ 0.82
SRM-206ENST00000490101 GPNMBQ14956 572 aa20.19■□□□□ 0.82
SRM-206ENST00000490101 CNNM4Q6P4Q7 775 aa20.19■□□□□ 0.82
SRM-206ENST00000490101 ATXN2LQ8WWM7 1075 aaKnown RBP20.19■□□□□ 0.82
SRM-206ENST00000490101 ARNTL2Q8WYA1 636 aa20.19■□□□□ 0.82
SRM-206ENST00000490101 STAMQ92783 540 aa20.19■□□□□ 0.82
SRM-206ENST00000490101 WNT8BQ93098 351 aa20.19■□□□□ 0.82
SRM-206ENST00000490101 C7orf25Q9BPX7 421 aa20.19■□□□□ 0.82
SRM-206ENST00000490101 WRAP73Q9P2S5 460 aaPredicted RBP20.19■□□□□ 0.82
SRM-206ENST00000490101 DOCK5Q9H7D0 1870 aa20.19■□□□□ 0.82
SRM-206ENST00000490101 IGKV6D-21A0A0A0MT36 114 aa20.18■□□□□ 0.82
SRM-206ENST00000490101 GSTTP1A0A1W2PQM5 241 aa20.18■□□□□ 0.82
SRM-206ENST00000490101 EPOPA6NHQ4 379 aa20.18■□□□□ 0.82
SRM-206ENST00000490101 TLL1O43897 1013 aa20.18■□□□□ 0.82
SRM-206ENST00000490101 DKC1O60832 514 aaKnown RBP eCLIP20.18■□□□□ 0.82
SRM-206ENST00000490101 NBNO60934 754 aa20.18■□□□□ 0.82
SRM-206ENST00000490101 PPFIA4O75335 1185 aa20.18■□□□□ 0.82
SRM-206ENST00000490101 PLA2G4BP0C869 781 aa20.18■□□□□ 0.82
SRM-206ENST00000490101 XRCC6P12956 609 aaKnown RBP eCLIP20.18■□□□□ 0.82
SRM-206ENST00000490101 WDR5P61964 334 aaKnown RBP20.18■□□□□ 0.82
SRM-206ENST00000490101 TAP1Q03518 808 aa20.18■□□□□ 0.82
SRM-206ENST00000490101 CNKSR3Q6P9H4 555 aa20.18■□□□□ 0.82
SRM-206ENST00000490101 SASS6Q6UVJ0 657 aa20.18■□□□□ 0.82
SRM-206ENST00000490101 C4orf19Q8IY42 314 aa20.18■□□□□ 0.82
SRM-206ENST00000490101 BANK1Q8NDB2 785 aa20.18■□□□□ 0.82
SRM-206ENST00000490101 SEPT1Q8WYJ6 367 aa20.18■□□□□ 0.82
SRM-206ENST00000490101 ERCC4Q92889 916 aaPredicted RBP20.18■□□□□ 0.82
SRM-206ENST00000490101 SMARCE1Q969G3 411 aa20.18■□□□□ 0.82
SRM-206ENST00000490101 ASB2Q96Q27 587 aa20.18■□□□□ 0.82
SRM-206ENST00000490101 TELO2Q9Y4R8 837 aa20.18■□□□□ 0.82
SRM-206ENST00000490101 PTPRSQ13332 1948 aa20.17■□□□□ 0.82
SRM-206ENST00000490101 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.17■□□□□ 0.82
SRM-206ENST00000490101 CCDC192P0DO97 292 aa20.17■□□□□ 0.82
SRM-206ENST00000490101 HOXD8P13378 290 aaPredicted RBP20.17■□□□□ 0.82
SRM-206ENST00000490101 SLC12A3P55017 1021 aa20.17■□□□□ 0.82
SRM-206ENST00000490101 DEFB103AP81534 67 aa20.17■□□□□ 0.82
SRM-206ENST00000490101 MRPS5P82675 430 aaKnown RBP20.17■□□□□ 0.82
SRM-206ENST00000490101 SP4Q02446 784 aa20.17■□□□□ 0.82
SRM-206ENST00000490101 RBL2Q08999 1139 aa20.17■□□□□ 0.82
SRM-206ENST00000490101 CUL4BQ13620 913 aa20.17■□□□□ 0.82
SRM-206ENST00000490101 HIC1Q14526 733 aa20.17■□□□□ 0.82
SRM-206ENST00000490101 SKIV2LQ15477 1246 aaKnown RBP20.17■□□□□ 0.82
SRM-206ENST00000490101 TCTN1Q2MV58 587 aa20.17■□□□□ 0.82
SRM-206ENST00000490101 ZNF618Q5T7W0 954 aa20.17■□□□□ 0.82
SRM-206ENST00000490101 SYT2Q8N9I0 419 aaPredicted RBP20.17■□□□□ 0.82
SRM-206ENST00000490101 ATP6V0A1Q93050 837 aa20.17■□□□□ 0.82
SRM-206ENST00000490101 GSDMAQ96QA5 445 aa20.17■□□□□ 0.82
SRM-206ENST00000490101 ZBED2Q9BTP6 218 aa20.17■□□□□ 0.82
SRM-206ENST00000490101 TRIM9Q9C026 710 aa20.17■□□□□ 0.82
SRM-206ENST00000490101 TSPYL2Q9H2G4 693 aaPredicted RBP20.17■□□□□ 0.82
SRM-206ENST00000490101 PRRC2BQ5JSZ5 2229 aaKnown RBP20.17■□□□□ 0.82
SRM-206ENST00000490101 TYRO3Q06418 890 aa20.16■□□□□ 0.82
SRM-206ENST00000490101 UGCGQ16739 394 aa20.16■□□□□ 0.82
SRM-206ENST00000490101 TRIM71Q2Q1W2 868 aaKnown RBP20.16■□□□□ 0.82
SRM-206ENST00000490101 SWSAP1Q6NVH7 229 aa20.16■□□□□ 0.82
SRM-206ENST00000490101 SPRED2Q7Z698 418 aa20.16■□□□□ 0.82
SRM-206ENST00000490101 GPR20Q99678 358 aa20.16■□□□□ 0.82
SRM-206ENST00000490101 C16orf70Q9BSU1 422 aa20.16■□□□□ 0.82
SRM-206ENST00000490101 GABBR1Q9UBS5 961 aa20.16■□□□□ 0.82
SRM-206ENST00000490101 DBR1Q9UK59 544 aaKnown RBP20.16■□□□□ 0.82
SRM-206ENST00000490101 A0A087WWV3 80 aa20.15■□□□□ 0.82
SRM-206ENST00000490101 LCHNA4D1U4 455 aa20.15■□□□□ 0.82
SRM-206ENST00000490101 MYMKA6NI61 221 aa20.15■□□□□ 0.82
SRM-206ENST00000490101 NOP56O00567 594 aaKnown RBP20.15■□□□□ 0.82
SRM-206ENST00000490101 PARNO95453 639 aaKnown RBP20.15■□□□□ 0.82
SRM-206ENST00000490101 CXCL10P02778 98 aa20.15■□□□□ 0.82
SRM-206ENST00000490101 CASP1P29466 404 aa20.15■□□□□ 0.82
SRM-206ENST00000490101 DHX8Q14562 1220 aaKnown RBP20.15■□□□□ 0.82
SRM-206ENST00000490101 FAM117BQ6P1L5 589 aa20.15■□□□□ 0.82
SRM-206ENST00000490101 CCDC60Q8IWA6 550 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms