RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 CLSTN1O94985 981 aa16.32■□□□□ 0.2
COL9A1-208ENST00000489611 UBXN2AP68543 259 aa16.32■□□□□ 0.2
COL9A1-208ENST00000489611 CETN1Q12798 172 aa16.32■□□□□ 0.2
COL9A1-208ENST00000489611 MTMR1Q13613 665 aa16.32■□□□□ 0.2
COL9A1-208ENST00000489611 PADI6Q6TGC4 694 aa16.32■□□□□ 0.2
COL9A1-208ENST00000489611 DRC1Q96MC2 740 aa16.32■□□□□ 0.2
COL9A1-208ENST00000489611 AGO4Q9HCK5 861 aaKnown RBP16.32■□□□□ 0.2
COL9A1-208ENST00000489611 PSD3Q9NYI0 1048 aa16.32■□□□□ 0.2
COL9A1-208ENST00000489611 PDE2AO00408 941 aaPredicted RBP16.31■□□□□ 0.2
COL9A1-208ENST00000489611 CLIC2O15247 247 aa16.31■□□□□ 0.2
COL9A1-208ENST00000489611 DHX15O43143 795 aaKnown RBP16.31■□□□□ 0.2
COL9A1-208ENST00000489611 TNFRSF8P28908 595 aa16.31■□□□□ 0.2
COL9A1-208ENST00000489611 FMO5P49326 533 aa16.31■□□□□ 0.2
COL9A1-208ENST00000489611 CASP4P49662 377 aa16.31■□□□□ 0.2
COL9A1-208ENST00000489611 NPEPPSP55786 919 aa16.31■□□□□ 0.2
COL9A1-208ENST00000489611 MEI1Q5TIA1 1274 aa16.31■□□□□ 0.2
COL9A1-208ENST00000489611 CCNI2Q6ZMN8 369 aaPredicted RBP16.31■□□□□ 0.2
COL9A1-208ENST00000489611 INTS8Q75QN2 995 aaKnown RBP16.31■□□□□ 0.2
COL9A1-208ENST00000489611 C4orf19Q8IY42 314 aa16.31■□□□□ 0.2
COL9A1-208ENST00000489611 SYCP3Q8IZU3 236 aa16.31■□□□□ 0.2
COL9A1-208ENST00000489611 FAM71BQ8TC56 605 aa16.31■□□□□ 0.2
COL9A1-208ENST00000489611 STK33Q9BYT3 514 aa16.31■□□□□ 0.2
COL9A1-208ENST00000489611 AS3MTQ9HBK9 375 aa16.31■□□□□ 0.2
COL9A1-208ENST00000489611 SIX2Q9NPC8 291 aa16.31■□□□□ 0.2
COL9A1-208ENST00000489611 NAGPAQ9UK23 515 aa16.31■□□□□ 0.2
COL9A1-208ENST00000489611 SFI1A8K8P3 1242 aa16.31■□□□□ 0.2
COL9A1-208ENST00000489611 HIP1RO75146 1068 aa16.31■□□□□ 0.2
COL9A1-208ENST00000489611 KRT13P13646 458 aa16.31■□□□□ 0.2
COL9A1-208ENST00000489611 KLRC1P26715 233 aa16.31■□□□□ 0.2
COL9A1-208ENST00000489611 AARSP49588 968 aaKnown RBP eCLIP16.31■□□□□ 0.2
COL9A1-208ENST00000489611 OAZ1P54368 228 aa16.31■□□□□ 0.2
COL9A1-208ENST00000489611 KRT76Q01546 638 aa16.31■□□□□ 0.2
COL9A1-208ENST00000489611 ARID5AQ03989 594 aa16.31■□□□□ 0.2
COL9A1-208ENST00000489611 KCNA1Q09470 495 aa16.31■□□□□ 0.2
COL9A1-208ENST00000489611 ALKBH5Q6P6C2 394 aaKnown RBP16.31■□□□□ 0.2
COL9A1-208ENST00000489611 SYTL5Q8TDW5 730 aaPredicted RBP16.31■□□□□ 0.2
COL9A1-208ENST00000489611 EXOC4Q96A65 974 aa16.31■□□□□ 0.2
COL9A1-208ENST00000489611 SALL4Q9UJQ4 1053 aa16.31■□□□□ 0.2
COL9A1-208ENST00000489611 DOCK1Q14185 1865 aa16.3■□□□□ 0.2
COL9A1-208ENST00000489611 GLTPD2A6NH11 291 aa16.3■□□□□ 0.2
COL9A1-208ENST00000489611 NFIBO00712 420 aa16.3■□□□□ 0.2
COL9A1-208ENST00000489611 DKC1O60832 514 aaKnown RBP eCLIP16.3■□□□□ 0.2
COL9A1-208ENST00000489611 PALMO75781 387 aa16.3■□□□□ 0.2
COL9A1-208ENST00000489611 ACTN1P12814 892 aa16.3■□□□□ 0.2
COL9A1-208ENST00000489611 ALAS1P13196 640 aa16.3■□□□□ 0.2
COL9A1-208ENST00000489611 PLS3P13797 630 aa16.3■□□□□ 0.2
COL9A1-208ENST00000489611 MAPK7Q13164 816 aa16.3■□□□□ 0.2
COL9A1-208ENST00000489611 ZC2HC1CQ53FD0 456 aaPredicted RBP16.3■□□□□ 0.2
COL9A1-208ENST00000489611 NFRKBQ6P4R8 1299 aa16.3■□□□□ 0.2
COL9A1-208ENST00000489611 ZNF571Q7Z3V5 609 aaPredicted RBP16.3■□□□□ 0.2
COL9A1-208ENST00000489611 SYCE1Q8N0S2 351 aa16.3■□□□□ 0.2
COL9A1-208ENST00000489611 COG1Q8WTW3 980 aa16.3■□□□□ 0.2
COL9A1-208ENST00000489611 L3MBTL3Q96JM7 780 aaPredicted RBP16.3■□□□□ 0.2
COL9A1-208ENST00000489611 CCDC43Q96MW1 224 aaKnown RBP16.3■□□□□ 0.2
COL9A1-208ENST00000489611 ACCSQ96QU6 501 aa16.3■□□□□ 0.2
COL9A1-208ENST00000489611 ANKEF1Q9NU02 776 aa16.3■□□□□ 0.2
COL9A1-208ENST00000489611 WRAP73Q9P2S5 460 aaPredicted RBP16.3■□□□□ 0.2
COL9A1-208ENST00000489611 ZHX2Q9Y6X8 837 aa16.3■□□□□ 0.2
COL9A1-208ENST00000489611 A0A0U1RQG5 324 aaPredicted RBP16.29■□□□□ 0.2
COL9A1-208ENST00000489611 ADM5C9JUS6 153 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 PMM2O15305 246 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 BUB1O43683 1085 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 CYP2C19P33261 490 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 ABCD1P33897 745 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 SOX5P35711 763 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 RARRES1P49788 294 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 BFSP1Q12934 665 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 ANKRD13CQ8N6S4 541 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 BANK1Q8NDB2 785 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.29■□□□□ 0.2
COL9A1-208ENST00000489611 TAF4BQ92750 862 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 HVCN1Q96D96 273 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 PBKQ96KB5 322 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 PDE11AQ9HCR9 933 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 NENFQ9UMX5 172 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 CCDC66A2RUB6 948 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 WDR64B1ANS9 1081 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 EXOC3O60645 756 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 H2AFZP0C0S5 128 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 MCCD1P59942 119 aaPredicted RBP16.29■□□□□ 0.2
COL9A1-208ENST00000489611 PSMC5P62195 406 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 PRKG1Q13976 671 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 PGM5Q15124 567 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 H2AFVQ71UI9 128 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 RBM46Q8TBY0 533 aaKnown RBP16.29■□□□□ 0.2
COL9A1-208ENST00000489611 DCPSQ96C86 337 aaKnown RBP16.29■□□□□ 0.2
COL9A1-208ENST00000489611 ST7Q9NRC1 585 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 COL20A1Q9P218 1284 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 STIM2Q9P246 746 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 APEX2Q9UBZ4 518 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 SAMM50Q9Y512 469 aa16.29■□□□□ 0.2
COL9A1-208ENST00000489611 K7ENM7 598 aa16.28■□□□□ 0.2
COL9A1-208ENST00000489611 POLR3GO15318 223 aaPredicted RBP16.28■□□□□ 0.2
COL9A1-208ENST00000489611 VCAM1P19320 739 aa16.28■□□□□ 0.2
COL9A1-208ENST00000489611 EPHX2P34913 555 aa16.28■□□□□ 0.2
COL9A1-208ENST00000489611 MRPS9P82933 396 aaKnown RBP16.28■□□□□ 0.2
COL9A1-208ENST00000489611 C2orf54Q08AI8 447 aa16.28■□□□□ 0.2
COL9A1-208ENST00000489611 C8orf74Q6P047 294 aa16.28■□□□□ 0.2
COL9A1-208ENST00000489611 EMBQ6PCB8 327 aa16.28■□□□□ 0.2
COL9A1-208ENST00000489611 SAMD1Q6SPF0 538 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms