RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 RFC5P40937 340 aa13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 PRPHP41219 470 aa13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 CRYBB1P53674 252 aaPredicted RBP13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 ZRSR1Q15695 479 aaKnown RBP13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 FOXD4L6Q3SYB3 417 aaPredicted RBP13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 HAUS3Q68CZ6 603 aa13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 FOXD4L3Q6VB84 417 aaPredicted RBP13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 MAEAQ7L5Y9 396 aa13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 OTUD6AQ7L8S5 288 aa13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 RTN4RL1Q86UN2 441 aaPredicted RBP13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 GUCD1Q96NT3 240 aa13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 PLIN2Q99541 437 aa13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 MTRQ99707 1265 aa13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 FDXACB1Q9BRP7 624 aaPredicted RBP13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 ZBED2Q9BTP6 218 aa13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 MMTAG2Q9BU76 263 aaKnown RBP13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 ANKEF1Q9NU02 776 aa13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 ST3GAL5Q9UNP4 418 aa13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 PCDHA11Q9Y5I1 949 aa13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 COL4A6Q14031 1691 aa13.68□□□□□ -0.22
SMARCD3-213ENST00000489503 COL4A4P53420 1690 aaPredicted RBP13.67□□□□□ -0.22
SMARCD3-213ENST00000489503 GJB5O95377 273 aa13.67□□□□□ -0.22
SMARCD3-213ENST00000489503 DNM2P50570 870 aa13.67□□□□□ -0.22
SMARCD3-213ENST00000489503 PPP2R2DQ66LE6 453 aa13.67□□□□□ -0.22
SMARCD3-213ENST00000489503 KCNK18Q7Z418 384 aa13.67□□□□□ -0.22
SMARCD3-213ENST00000489503 USP38Q8NB14 1042 aa13.67□□□□□ -0.22
SMARCD3-213ENST00000489503 PHOSPHO2Q8TCD6 241 aa13.67□□□□□ -0.22
SMARCD3-213ENST00000489503 ASAP3Q8TDY4 903 aa13.67□□□□□ -0.22
SMARCD3-213ENST00000489503 USP28Q96RU2 1077 aa13.67□□□□□ -0.22
SMARCD3-213ENST00000489503 SEMA6BQ9H3T3 888 aa13.67□□□□□ -0.22
SMARCD3-213ENST00000489503 CERS4Q9HA82 394 aa13.67□□□□□ -0.22
SMARCD3-213ENST00000489503 ATP6V0A4Q9HBG4 840 aa13.67□□□□□ -0.22
SMARCD3-213ENST00000489503 GPRC5CQ9NQ84 441 aa13.67□□□□□ -0.22
SMARCD3-213ENST00000489503 DDX19AQ9NUU7 478 aaKnown RBP13.67□□□□□ -0.22
SMARCD3-213ENST00000489503 MTMR10Q9NXD2 777 aa13.67□□□□□ -0.22
SMARCD3-213ENST00000489503 KIAA1024Q9UPX6 916 aa13.67□□□□□ -0.22
SMARCD3-213ENST00000489503 COL4A3BPQ9Y5P4 624 aa13.67□□□□□ -0.22
SMARCD3-213ENST00000489503 E9PMD0 336 aa13.66□□□□□ -0.22
SMARCD3-213ENST00000489503 ENPP3O14638 875 aa13.66□□□□□ -0.22
SMARCD3-213ENST00000489503 DARSP14868 501 aaKnown RBP13.66□□□□□ -0.22
SMARCD3-213ENST00000489503 MARCKSP29966 332 aaPredicted RBP13.66□□□□□ -0.22
SMARCD3-213ENST00000489503 LAMTOR4Q0VGL1 99 aa13.66□□□□□ -0.22
SMARCD3-213ENST00000489503 GRIN2CQ14957 1233 aa13.66□□□□□ -0.22
SMARCD3-213ENST00000489503 PTPAQ15257 358 aa13.66□□□□□ -0.22
SMARCD3-213ENST00000489503 GPR153Q6NV75 609 aa13.66□□□□□ -0.22
SMARCD3-213ENST00000489503 PRPF31Q8WWY3 499 aaKnown RBP13.66□□□□□ -0.22
SMARCD3-213ENST00000489503 PSPC1Q8WXF1 523 aaKnown RBP13.66□□□□□ -0.22
SMARCD3-213ENST00000489503 PNMA5Q96PV4 448 aa13.66□□□□□ -0.22
SMARCD3-213ENST00000489503 JPH2Q9BR39 696 aaPredicted RBP13.66□□□□□ -0.22
SMARCD3-213ENST00000489503 RAB34Q9BZG1 259 aa13.66□□□□□ -0.22
SMARCD3-213ENST00000489503 POLR3FQ9H1D9 316 aaPredicted RBP13.66□□□□□ -0.22
SMARCD3-213ENST00000489503 ZNF576Q9H609 170 aa13.66□□□□□ -0.22
SMARCD3-213ENST00000489503 POLD4Q9HCU8 107 aa13.66□□□□□ -0.22
SMARCD3-213ENST00000489503 PPME1Q9Y570 386 aa13.66□□□□□ -0.22
SMARCD3-213ENST00000489503 SQORQ9Y6N5 450 aa13.66□□□□□ -0.22
SMARCD3-213ENST00000489503 TTC3P53804 2025 aa13.66□□□□□ -0.22
SMARCD3-213ENST00000489503 ARHGEF35A5YM69 484 aa13.65□□□□□ -0.22
SMARCD3-213ENST00000489503 SRGAP2CP0DJJ0 459 aa13.65□□□□□ -0.22
SMARCD3-213ENST00000489503 EIF4BP23588 611 aaKnown RBP13.65□□□□□ -0.22
SMARCD3-213ENST00000489503 GATMP50440 423 aa13.65□□□□□ -0.22
SMARCD3-213ENST00000489503 PDIA5Q14554 519 aa13.65□□□□□ -0.22
SMARCD3-213ENST00000489503 KRT79Q5XKE5 535 aa13.65□□□□□ -0.22
SMARCD3-213ENST00000489503 ARL6IP4Q66PJ3 421 aaKnown RBP13.65□□□□□ -0.22
SMARCD3-213ENST00000489503 PADI6Q6TGC4 694 aa13.65□□□□□ -0.22
SMARCD3-213ENST00000489503 LRRC15Q8TF66 581 aa13.65□□□□□ -0.22
SMARCD3-213ENST00000489503 MYLIPQ8WY64 445 aa13.65□□□□□ -0.22
SMARCD3-213ENST00000489503 NACC1Q96RE7 527 aa13.65□□□□□ -0.22
SMARCD3-213ENST00000489503 ADAM2Q99965 735 aa13.65□□□□□ -0.22
SMARCD3-213ENST00000489503 GCOM2Q9BZD3 368 aaPredicted RBP13.65□□□□□ -0.22
SMARCD3-213ENST00000489503 TSPYL2Q9H2G4 693 aaPredicted RBP13.65□□□□□ -0.22
SMARCD3-213ENST00000489503 BHMT2Q9H2M3 363 aa13.65□□□□□ -0.22
SMARCD3-213ENST00000489503 MINDY3Q9H8M7 445 aa13.65□□□□□ -0.22
SMARCD3-213ENST00000489503 SLC28A3Q9HAS3 691 aa13.65□□□□□ -0.22
SMARCD3-213ENST00000489503 DBR1Q9UK59 544 aaKnown RBP13.65□□□□□ -0.22
SMARCD3-213ENST00000489503 MTUS1Q9ULD2 1270 aa13.65□□□□□ -0.22
SMARCD3-213ENST00000489503 MYO9BQ13459 2157 aa13.65□□□□□ -0.22
SMARCD3-213ENST00000489503 DENND3A2RUS2 1198 aa13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 EPOPA6NHQ4 379 aa13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 GPR182O15218 404 aa13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 DGAT1O75907 488 aa13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 SLC34A2O95436 690 aa13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 ZSCAN22P10073 491 aaPredicted RBP13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 GLRA2P23416 452 aa13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 TAP1Q03518 808 aa13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 GRB10Q13322 594 aa13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 CAPSQ13938 189 aa13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 DSC3Q14574 896 aa13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 SPECC1Q5M775 1068 aa13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 CABP7Q86V35 215 aa13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 ZNF410Q86VK4 478 aa13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 RNF149Q8NC42 400 aa13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 TCP11Q8WWU5 503 aa13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 BSNDQ8WZ55 320 aa13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 TOP1MTQ969P6 601 aa13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 CLIC6Q96NY7 704 aa13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 YME1L1Q96TA2 773 aa13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 CDX2Q99626 313 aaPredicted RBP13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 FTHL17Q9BXU8 183 aa13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 PRDM12Q9H4Q4 367 aa13.64□□□□□ -0.23
SMARCD3-213ENST00000489503 IFT122Q9HBG6 1241 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms