RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 SLC17A8Q8NDX2 589 aa23.04■■□□□ 1.28
SND1-214ENST00000489417 SAMSN1Q9NSI8 373 aaKnown RBP23.04■■□□□ 1.28
SND1-214ENST00000489417 PCDHB13Q9Y5F0 798 aa23.04■■□□□ 1.28
SND1-214ENST00000489417 COL1A2P08123 1366 aa23.03■■□□□ 1.28
SND1-214ENST00000489417 DMP1Q13316 513 aaPredicted RBP23.03■■□□□ 1.28
SND1-214ENST00000489417 ALCAMQ13740 583 aa23.03■■□□□ 1.28
SND1-214ENST00000489417 FSCN1Q16658 493 aaKnown RBP23.03■■□□□ 1.28
SND1-214ENST00000489417 CDKAL1Q5VV42 579 aa23.03■■□□□ 1.28
SND1-214ENST00000489417 NOC3LQ8WTT2 800 aaKnown RBP23.03■■□□□ 1.28
SND1-214ENST00000489417 SPIRE2Q8WWL2 714 aa23.03■■□□□ 1.28
SND1-214ENST00000489417 BSNDQ8WZ55 320 aa23.03■■□□□ 1.28
SND1-214ENST00000489417 TMEM143Q96AN5 459 aa23.03■■□□□ 1.28
SND1-214ENST00000489417 JPH2Q9BR39 696 aaPredicted RBP23.03■■□□□ 1.28
SND1-214ENST00000489417 KCTD10Q9H3F6 313 aa23.03■■□□□ 1.28
SND1-214ENST00000489417 MYH11P35749 1972 aa23.02■■□□□ 1.28
SND1-214ENST00000489417 GAS2O43903 313 aaKnown RBP23.02■■□□□ 1.28
SND1-214ENST00000489417 PPP1R37O75864 691 aa23.02■■□□□ 1.28
SND1-214ENST00000489417 F2P00734 622 aa23.02■■□□□ 1.28
SND1-214ENST00000489417 ATP1A3P13637 1013 aa23.02■■□□□ 1.28
SND1-214ENST00000489417 INSRRP14616 1297 aa23.02■■□□□ 1.28
SND1-214ENST00000489417 CCND3P30281 292 aaPredicted RBP23.02■■□□□ 1.28
SND1-214ENST00000489417 ARL2P36404 184 aa23.02■■□□□ 1.28
SND1-214ENST00000489417 NCKAP1LP55160 1127 aa23.02■■□□□ 1.28
SND1-214ENST00000489417 GJA9P57773 515 aa23.02■■□□□ 1.28
SND1-214ENST00000489417 IRX5P78411 483 aaPredicted RBP23.02■■□□□ 1.28
SND1-214ENST00000489417 BEX3Q00994 111 aa23.02■■□□□ 1.28
SND1-214ENST00000489417 KNOP1Q1ED39 458 aaKnown RBP23.02■■□□□ 1.28
SND1-214ENST00000489417 ZCWPW2Q504Y3 356 aa23.02■■□□□ 1.28
SND1-214ENST00000489417 ZC2HC1CQ53FD0 456 aaPredicted RBP23.02■■□□□ 1.28
SND1-214ENST00000489417 MAP3K21Q5TCX8 1036 aa23.02■■□□□ 1.28
SND1-214ENST00000489417 CSGALNACT2Q8N6G5 542 aa23.02■■□□□ 1.28
SND1-214ENST00000489417 TRAPPC12Q8WVT3 735 aa23.02■■□□□ 1.28
SND1-214ENST00000489417 IFT74Q96LB3 600 aa23.02■■□□□ 1.28
SND1-214ENST00000489417 STRA6Q9BX79 667 aa23.02■■□□□ 1.28
SND1-214ENST00000489417 UPF3AQ9H1J1 476 aaKnown RBP23.02■■□□□ 1.28
SND1-214ENST00000489417 ST6GALNAC4Q9H4F1 302 aa23.02■■□□□ 1.28
SND1-214ENST00000489417 IGKV6-21A0A0C4DH24 114 aa23.01■■□□□ 1.27
SND1-214ENST00000489417 CCDC169A6NNP5 214 aa23.01■■□□□ 1.27
SND1-214ENST00000489417 ADCY5O95622 1261 aa23.01■■□□□ 1.27
SND1-214ENST00000489417 MYL3P08590 195 aa23.01■■□□□ 1.27
SND1-214ENST00000489417 RARBP10826 455 aa23.01■■□□□ 1.27
SND1-214ENST00000489417 CDK11BP21127 795 aaKnown RBP23.01■■□□□ 1.27
SND1-214ENST00000489417 HOXD13P35453 343 aa23.01■■□□□ 1.27
SND1-214ENST00000489417 NPTX2P47972 431 aa23.01■■□□□ 1.27
SND1-214ENST00000489417 SMTNP53814 917 aa23.01■■□□□ 1.27
SND1-214ENST00000489417 HSP90AA4PQ58FG1 418 aa23.01■■□□□ 1.27
SND1-214ENST00000489417 SLAIN1Q8ND83 568 aa23.01■■□□□ 1.27
SND1-214ENST00000489417 SRRTQ9BXP5 876 aaKnown RBP23.01■■□□□ 1.27
SND1-214ENST00000489417 TRIM5Q9C035 493 aa23.01■■□□□ 1.27
SND1-214ENST00000489417 THAP9Q9H5L6 903 aa23.01■■□□□ 1.27
SND1-214ENST00000489417 WBP1LQ9NX94 342 aa23.01■■□□□ 1.27
SND1-214ENST00000489417 KCNG1Q9UIX4 513 aa23.01■■□□□ 1.27
SND1-214ENST00000489417 SLC16A4O15374 487 aa23■■□□□ 1.27
SND1-214ENST00000489417 FANCCQ00597 558 aa23■■□□□ 1.27
SND1-214ENST00000489417 IER5Q5VY09 327 aa23■■□□□ 1.27
SND1-214ENST00000489417 PPP4R3CPQ6ZMV5 832 aa23■■□□□ 1.27
SND1-214ENST00000489417 HAUS6Q7Z4H7 955 aa23■■□□□ 1.27
SND1-214ENST00000489417 ASAP3Q8TDY4 903 aa23■■□□□ 1.27
SND1-214ENST00000489417 TCP11Q8WWU5 503 aa23■■□□□ 1.27
SND1-214ENST00000489417 KAT2BQ92831 832 aa23■■□□□ 1.27
SND1-214ENST00000489417 NTPCRQ9BSD7 190 aaKnown RBP23■■□□□ 1.27
SND1-214ENST00000489417 SPC25Q9HBM1 224 aa23■■□□□ 1.27
SND1-214ENST00000489417 KMT5AQ9NQR1 393 aa23■■□□□ 1.27
SND1-214ENST00000489417 TRIM17Q9Y577 477 aa23■■□□□ 1.27
SND1-214ENST00000489417 C22orf31O95567 290 aa22.99■■□□□ 1.27
SND1-214ENST00000489417 C6orf222P0C671 652 aaPredicted RBP22.99■■□□□ 1.27
SND1-214ENST00000489417 ZNF75DP51815 510 aa22.99■■□□□ 1.27
SND1-214ENST00000489417 IGBP1P78318 339 aa22.99■■□□□ 1.27
SND1-214ENST00000489417 NKX3-2P78367 333 aa22.99■■□□□ 1.27
SND1-214ENST00000489417 SPAG1Q07617 926 aa22.99■■□□□ 1.27
SND1-214ENST00000489417 PPFIA1Q13136 1202 aa22.99■■□□□ 1.27
SND1-214ENST00000489417 PPP2R5AQ15172 486 aa22.99■■□□□ 1.27
SND1-214ENST00000489417 HVCN1Q96D96 273 aa22.99■■□□□ 1.27
SND1-214ENST00000489417 TYW1Q9NV66 732 aaKnown RBP22.99■■□□□ 1.27
SND1-214ENST00000489417 MYADML2A6NDP7 307 aa22.99■■□□□ 1.27
SND1-214ENST00000489417 PDXKO00764 312 aa22.99■■□□□ 1.27
SND1-214ENST00000489417 MAGEB2O15479 319 aa22.99■■□□□ 1.27
SND1-214ENST00000489417 CALUO43852 315 aaPredicted RBP22.99■■□□□ 1.27
SND1-214ENST00000489417 KPNA6O60684 536 aa22.99■■□□□ 1.27
SND1-214ENST00000489417 FGFR1OPO95684 399 aaKnown RBP22.99■■□□□ 1.27
SND1-214ENST00000489417 GLRA2P23416 452 aa22.99■■□□□ 1.27
SND1-214ENST00000489417 PSEN2P49810 448 aa22.99■■□□□ 1.27
SND1-214ENST00000489417 GTF2BQ00403 316 aa22.99■■□□□ 1.27
SND1-214ENST00000489417 KCNA1Q09470 495 aa22.99■■□□□ 1.27
SND1-214ENST00000489417 MFSD10Q14728 455 aa22.99■■□□□ 1.27
SND1-214ENST00000489417 KSR1Q8IVT5 923 aa22.99■■□□□ 1.27
SND1-214ENST00000489417 TMEM161BQ8NDZ6 487 aa22.99■■□□□ 1.27
SND1-214ENST00000489417 ACCSQ96QU6 501 aa22.99■■□□□ 1.27
SND1-214ENST00000489417 SUGCTQ9HAC7 445 aa22.99■■□□□ 1.27
SND1-214ENST00000489417 TRAF3IP3Q9Y228 551 aa22.99■■□□□ 1.27
SND1-214ENST00000489417 ZMYM2Q9UBW7 1377 aa22.98■■□□□ 1.27
SND1-214ENST00000489417 H0YCG3 227 aa22.98■■□□□ 1.27
SND1-214ENST00000489417 HAS3O00219 553 aa22.98■■□□□ 1.27
SND1-214ENST00000489417 SERPINC1P01008 464 aa22.98■■□□□ 1.27
SND1-214ENST00000489417 INHAP05111 366 aa22.98■■□□□ 1.27
SND1-214ENST00000489417 NAMPTP43490 491 aa22.98■■□□□ 1.27
SND1-214ENST00000489417 CCDC173Q0VFZ6 552 aa22.98■■□□□ 1.27
SND1-214ENST00000489417 DRP2Q13474 957 aa22.98■■□□□ 1.27
SND1-214ENST00000489417 GRIK4Q16099 956 aa22.98■■□□□ 1.27
SND1-214ENST00000489417 KIAA0753Q2KHM9 967 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms