RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 SEPT1Q8WYJ6 367 aa17.36■□□□□ 0.37
UFD1-209ENST00000489406 SENP7Q9BQF6 1050 aa17.36■□□□□ 0.37
UFD1-209ENST00000489406 WDR6Q9NNW5 1121 aaKnown RBP17.36■□□□□ 0.37
UFD1-209ENST00000489406 SMIM35A0A1B0GVV1 85 aa17.35■□□□□ 0.37
UFD1-209ENST00000489406 SRRM3A6NNA2 597 aaPredicted RBP17.35■□□□□ 0.37
UFD1-209ENST00000489406 GPR182O15218 404 aa17.35■□□□□ 0.37
UFD1-209ENST00000489406 CLCN4P51793 760 aa17.35■□□□□ 0.37
UFD1-209ENST00000489406 BCAR1P56945 870 aa17.35■□□□□ 0.37
UFD1-209ENST00000489406 GPC5P78333 572 aa17.35■□□□□ 0.37
UFD1-209ENST00000489406 WTAPQ15007 396 aa17.35■□□□□ 0.37
UFD1-209ENST00000489406 PLCB4Q15147 1175 aa17.35■□□□□ 0.37
UFD1-209ENST00000489406 ODR4Q5SWX8 454 aa17.35■□□□□ 0.37
UFD1-209ENST00000489406 PRR23BQ6ZRT6 265 aa17.35■□□□□ 0.37
UFD1-209ENST00000489406 FAM43BQ6ZT52 329 aaPredicted RBP17.35■□□□□ 0.37
UFD1-209ENST00000489406 TMEM173Q86WV6 379 aaPredicted RBP17.35■□□□□ 0.37
UFD1-209ENST00000489406 SAMD3Q8N6K7 520 aa17.35■□□□□ 0.37
UFD1-209ENST00000489406 PNMA1Q8ND90 353 aa17.35■□□□□ 0.37
UFD1-209ENST00000489406 DDX23Q9BUQ8 820 aaKnown RBP17.35■□□□□ 0.37
UFD1-209ENST00000489406 LRRCC1Q9C099 1032 aa17.35■□□□□ 0.37
UFD1-209ENST00000489406 CLUHO75153 1309 aa17.35■□□□□ 0.37
UFD1-209ENST00000489406 NBEAQ8NFP9 2946 aa17.35■□□□□ 0.37
UFD1-209ENST00000489406 LAMP2P13473 410 aa17.34■□□□□ 0.37
UFD1-209ENST00000489406 NCLP19338 710 aaKnown RBP17.34■□□□□ 0.37
UFD1-209ENST00000489406 CD72P21854 359 aa17.34■□□□□ 0.37
UFD1-209ENST00000489406 KLRC2P26717 231 aa17.34■□□□□ 0.37
UFD1-209ENST00000489406 HTR4Q13639 388 aa17.34■□□□□ 0.37
UFD1-209ENST00000489406 ASPRV1Q53RT3 343 aa17.34■□□□□ 0.37
UFD1-209ENST00000489406 RNF169Q8NCN4 708 aa17.34■□□□□ 0.37
UFD1-209ENST00000489406 MYL10Q9BUA6 226 aa17.34■□□□□ 0.37
UFD1-209ENST00000489406 NUMBLQ9Y6R0 609 aa17.34■□□□□ 0.37
UFD1-209ENST00000489406 DSPP15924 2871 aaKnown RBP17.34■□□□□ 0.37
UFD1-209ENST00000489406 CCDC195A0A1B0GUA6 201 aa17.33■□□□□ 0.36
UFD1-209ENST00000489406 TRIM6-TRIM34B2RNG4 842 aa17.33■□□□□ 0.36
UFD1-209ENST00000489406 ANHXE9PGG2 379 aa17.33■□□□□ 0.36
UFD1-209ENST00000489406 ATP9AO75110 1047 aa17.33■□□□□ 0.36
UFD1-209ENST00000489406 MAGEA9P43362 315 aa17.33■□□□□ 0.36
UFD1-209ENST00000489406 POLGP54098 1239 aaPredicted RBP17.33■□□□□ 0.36
UFD1-209ENST00000489406 DSC3Q14574 896 aa17.33■□□□□ 0.36
UFD1-209ENST00000489406 CLLU1OSQ5K130 101 aa17.33■□□□□ 0.36
UFD1-209ENST00000489406 FAM228AQ86W67 206 aa17.33■□□□□ 0.36
UFD1-209ENST00000489406 CELF5Q8N6W0 485 aaKnown RBP17.33■□□□□ 0.36
UFD1-209ENST00000489406 GIMAP8Q8ND71 665 aaPredicted RBP17.33■□□□□ 0.36
UFD1-209ENST00000489406 KLHL5Q96PQ7 755 aa17.33■□□□□ 0.36
UFD1-209ENST00000489406 RPP25Q9BUL9 199 aaKnown RBP17.33■□□□□ 0.36
UFD1-209ENST00000489406 FAM126AQ9BYI3 521 aaPredicted RBP17.33■□□□□ 0.36
UFD1-209ENST00000489406 OSBPL6Q9BZF3 934 aa17.33■□□□□ 0.36
UFD1-209ENST00000489406 LAMA4Q16363 1823 aa17.33■□□□□ 0.36
UFD1-209ENST00000489406 TAF4O00268 1085 aa17.32■□□□□ 0.36
UFD1-209ENST00000489406 TM4SF5O14894 197 aa17.32■□□□□ 0.36
UFD1-209ENST00000489406 PARP1P09874 1014 aaKnown RBP17.32■□□□□ 0.36
UFD1-209ENST00000489406 MYBP10242 640 aa17.32■□□□□ 0.36
UFD1-209ENST00000489406 MLF2Q15773 248 aaPredicted RBP17.32■□□□□ 0.36
UFD1-209ENST00000489406 SLC44A4Q53GD3 710 aa17.32■□□□□ 0.36
UFD1-209ENST00000489406 DDX53Q86TM3 631 aaKnown RBP17.32■□□□□ 0.36
UFD1-209ENST00000489406 CMASQ8NFW8 434 aaPredicted RBP17.32■□□□□ 0.36
UFD1-209ENST00000489406 HELQQ8TDG4 1101 aa17.32■□□□□ 0.36
UFD1-209ENST00000489406 MAP4K1Q92918 833 aa17.32■□□□□ 0.36
UFD1-209ENST00000489406 PPP1R16BQ96T49 567 aa17.32■□□□□ 0.36
UFD1-209ENST00000489406 LTB4R2Q9NPC1 389 aa17.32■□□□□ 0.36
UFD1-209ENST00000489406 PRMT8Q9NR22 394 aaPredicted RBP17.32■□□□□ 0.36
UFD1-209ENST00000489406 DOCK8Q8NF50 2099 aa17.32■□□□□ 0.36
UFD1-209ENST00000489406 HAND2P61296 217 aa17.31■□□□□ 0.36
UFD1-209ENST00000489406 PRKCQQ04759 706 aa17.31■□□□□ 0.36
UFD1-209ENST00000489406 ZBTB41Q5SVQ8 909 aa17.31■□□□□ 0.36
UFD1-209ENST00000489406 MTHFD1LQ6UB35 978 aa17.31■□□□□ 0.36
UFD1-209ENST00000489406 DGKHQ86XP1 1220 aa17.31■□□□□ 0.36
UFD1-209ENST00000489406 PANK1Q8TE04 598 aa17.31■□□□□ 0.36
UFD1-209ENST00000489406 PCYT2Q99447 389 aa17.31■□□□□ 0.36
UFD1-209ENST00000489406 EMILIN2Q9BXX0 1053 aa17.31■□□□□ 0.36
UFD1-209ENST00000489406 KAT14Q9H8E8 782 aa17.31■□□□□ 0.36
UFD1-209ENST00000489406 MAN1C1Q9NR34 630 aa17.31■□□□□ 0.36
UFD1-209ENST00000489406 PKD2L1Q9P0L9 805 aa17.31■□□□□ 0.36
UFD1-209ENST00000489406 FRMPD4Q14CM0 1322 aa17.3■□□□□ 0.36
UFD1-209ENST00000489406 ZBTB5O15062 677 aa17.3■□□□□ 0.36
UFD1-209ENST00000489406 ZC3H11AO75152 810 aaKnown RBP eCLIP17.3■□□□□ 0.36
UFD1-209ENST00000489406 CNPP09543 421 aaKnown RBP17.3■□□□□ 0.36
UFD1-209ENST00000489406 KCNA2P16389 499 aa17.3■□□□□ 0.36
UFD1-209ENST00000489406 GET4Q7L5D6 327 aaPredicted RBP17.3■□□□□ 0.36
UFD1-209ENST00000489406 NLRX1Q86UT6 975 aa17.3■□□□□ 0.36
UFD1-209ENST00000489406 ECHDC2Q86YB7 292 aa17.3■□□□□ 0.36
UFD1-209ENST00000489406 BCL7CQ8WUZ0 217 aaPredicted RBP17.3■□□□□ 0.36
UFD1-209ENST00000489406 TNPO1Q92973 898 aaKnown RBP17.3■□□□□ 0.36
UFD1-209ENST00000489406 GPATCH3Q96I76 525 aa17.3■□□□□ 0.36
UFD1-209ENST00000489406 IGSF21Q96ID5 467 aa17.3■□□□□ 0.36
UFD1-209ENST00000489406 RALGAPA1Q6GYQ0 2036 aa17.3■□□□□ 0.36
UFD1-209ENST00000489406 INPPL1O15357 1258 aa17.29■□□□□ 0.36
UFD1-209ENST00000489406 RFPL2O75678 378 aa17.29■□□□□ 0.36
UFD1-209ENST00000489406 KCNK5O95279 499 aa17.29■□□□□ 0.36
UFD1-209ENST00000489406 FGAP02671 866 aa17.29■□□□□ 0.36
UFD1-209ENST00000489406 SSBP05455 408 aaKnown RBP eCLIP17.29■□□□□ 0.36
UFD1-209ENST00000489406 SPINK2P20155 84 aa17.29■□□□□ 0.36
UFD1-209ENST00000489406 TARSP26639 723 aaKnown RBP17.29■□□□□ 0.36
UFD1-209ENST00000489406 MTAPQ13126 283 aa17.29■□□□□ 0.36
UFD1-209ENST00000489406 ALX1Q15699 326 aa17.29■□□□□ 0.36
UFD1-209ENST00000489406 AASDHQ4L235 1098 aaPredicted RBP17.29■□□□□ 0.36
UFD1-209ENST00000489406 MFSD6Q6ZSS7 791 aa17.29■□□□□ 0.36
UFD1-209ENST00000489406 KIAA0319LQ8IZA0 1049 aa17.29■□□□□ 0.36
UFD1-209ENST00000489406 STAG2Q8N3U4 1231 aa17.29■□□□□ 0.36
UFD1-209ENST00000489406 SMG7Q92540 1137 aaKnown RBP17.29■□□□□ 0.36
UFD1-209ENST00000489406 CLDN23Q96B33 292 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms