RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 FSD2A1L4K1 749 aa14□□□□□ -0.17
CPSF3-204ENST00000489403 CHMP2AO43633 222 aa14□□□□□ -0.17
CPSF3-204ENST00000489403 EIF4BP23588 611 aaKnown RBP14□□□□□ -0.17
CPSF3-204ENST00000489403 PDIA3P30101 505 aaKnown RBP14□□□□□ -0.17
CPSF3-204ENST00000489403 GPC3P51654 580 aa14□□□□□ -0.17
CPSF3-204ENST00000489403 CCT2P78371 535 aaKnown RBP14□□□□□ -0.17
CPSF3-204ENST00000489403 KCNC3Q14003 757 aa14□□□□□ -0.17
CPSF3-204ENST00000489403 CBX2Q14781 532 aaPredicted RBP14□□□□□ -0.17
CPSF3-204ENST00000489403 PDE12Q6L8Q7 609 aaKnown RBP14□□□□□ -0.17
CPSF3-204ENST00000489403 ALYREFQ86V81 257 aaKnown RBP14□□□□□ -0.17
CPSF3-204ENST00000489403 ECHDC2Q86YB7 292 aa14□□□□□ -0.17
CPSF3-204ENST00000489403 MRPS27Q92552 414 aaKnown RBP14□□□□□ -0.17
CPSF3-204ENST00000489403 GJA10Q969M2 543 aa14□□□□□ -0.17
CPSF3-204ENST00000489403 CCDC136Q96JN2 1154 aa14□□□□□ -0.17
CPSF3-204ENST00000489403 FBXL18Q96ME1 805 aa14□□□□□ -0.17
CPSF3-204ENST00000489403 RIT2Q99578 217 aa14□□□□□ -0.17
CPSF3-204ENST00000489403 PHF7Q9BWX1 381 aaPredicted RBP14□□□□□ -0.17
CPSF3-204ENST00000489403 TEKT3Q9BXF9 490 aa14□□□□□ -0.17
CPSF3-204ENST00000489403 KCNH6Q9H252 994 aa14□□□□□ -0.17
CPSF3-204ENST00000489403 UNC45AQ9H3U1 944 aa14□□□□□ -0.17
CPSF3-204ENST00000489403 LZTS1Q9Y250 596 aa14□□□□□ -0.17
CPSF3-204ENST00000489403 TECTAO75443 2155 aa14□□□□□ -0.17
CPSF3-204ENST00000489403 HOXA2O43364 376 aa13.99□□□□□ -0.17
CPSF3-204ENST00000489403 GAS7O60861 476 aa13.99□□□□□ -0.17
CPSF3-204ENST00000489403 DARSP14868 501 aaKnown RBP13.99□□□□□ -0.17
CPSF3-204ENST00000489403 ZSCAN20P17040 1043 aaPredicted RBP13.99□□□□□ -0.17
CPSF3-204ENST00000489403 FGFR4P22455 802 aa13.99□□□□□ -0.17
CPSF3-204ENST00000489403 SFNP31947 248 aa13.99□□□□□ -0.17
CPSF3-204ENST00000489403 PBX3P40426 434 aa13.99□□□□□ -0.17
CPSF3-204ENST00000489403 USP11P51784 963 aa13.99□□□□□ -0.17
CPSF3-204ENST00000489403 JAK3P52333 1124 aa13.99□□□□□ -0.17
CPSF3-204ENST00000489403 EVCP57679 992 aa13.99□□□□□ -0.17
CPSF3-204ENST00000489403 NLRP5P59047 1200 aa13.99□□□□□ -0.17
CPSF3-204ENST00000489403 NHLH1Q02575 133 aa13.99□□□□□ -0.17
CPSF3-204ENST00000489403 LRCH2Q5VUJ6 765 aa13.99□□□□□ -0.17
CPSF3-204ENST00000489403 KCNT2Q6UVM3 1135 aa13.99□□□□□ -0.17
CPSF3-204ENST00000489403 LRRC43Q8N309 656 aa13.99□□□□□ -0.17
CPSF3-204ENST00000489403 TBCKQ8TEA7 893 aa13.99□□□□□ -0.17
CPSF3-204ENST00000489403 SUSD6Q92537 303 aa13.99□□□□□ -0.17
CPSF3-204ENST00000489403 SLC5A5Q92911 643 aa13.99□□□□□ -0.17
CPSF3-204ENST00000489403 TCF25Q9BQ70 676 aa13.99□□□□□ -0.17
CPSF3-204ENST00000489403 SH3GLB2Q9NR46 395 aa13.99□□□□□ -0.17
CPSF3-204ENST00000489403 NRBP2Q9NSY0 501 aa13.99□□□□□ -0.17
CPSF3-204ENST00000489403 ZNF318Q5VUA4 2279 aa13.99□□□□□ -0.17
CPSF3-204ENST00000489403 MUC6Q6W4X9 2439 aa13.99□□□□□ -0.17
CPSF3-204ENST00000489403 HIDE1A8MVS5 230 aa13.98□□□□□ -0.17
CPSF3-204ENST00000489403 ATF7P17544 494 aaPredicted RBP13.98□□□□□ -0.17
CPSF3-204ENST00000489403 PSMA5P28066 241 aa13.98□□□□□ -0.17
CPSF3-204ENST00000489403 TBC1D8BQ0IIM8 1120 aa13.98□□□□□ -0.17
CPSF3-204ENST00000489403 DRP2Q13474 957 aa13.98□□□□□ -0.17
CPSF3-204ENST00000489403 TOB2Q14106 344 aaPredicted RBP13.98□□□□□ -0.17
CPSF3-204ENST00000489403 TARBP2Q15633 366 aaKnown RBP13.98□□□□□ -0.17
CPSF3-204ENST00000489403 CLLU1OSQ5K130 101 aa13.98□□□□□ -0.17
CPSF3-204ENST00000489403 TMEM184AQ6ZMB5 413 aa13.98□□□□□ -0.17
CPSF3-204ENST00000489403 ZNF598Q86UK7 904 aaKnown RBP13.98□□□□□ -0.17
CPSF3-204ENST00000489403 ABI1Q8IZP0 508 aa13.98□□□□□ -0.17
CPSF3-204ENST00000489403 ZNF710Q8N1W2 664 aa13.98□□□□□ -0.17
CPSF3-204ENST00000489403 NLRP7Q8WX94 980 aa13.98□□□□□ -0.17
CPSF3-204ENST00000489403 RPGRIP1Q96KN7 1286 aa13.98□□□□□ -0.17
CPSF3-204ENST00000489403 MFSD14AQ96MC6 490 aa13.98□□□□□ -0.17
CPSF3-204ENST00000489403 ZNF558Q96NG5 402 aa13.98□□□□□ -0.17
CPSF3-204ENST00000489403 ENTPD7Q9NQZ7 604 aa13.98□□□□□ -0.17
CPSF3-204ENST00000489403 PUF60Q9UHX1 559 aaKnown RBP13.98□□□□□ -0.17
CPSF3-204ENST00000489403 A0A0U1RQF3 1178 aa13.97□□□□□ -0.17
CPSF3-204ENST00000489403 TMEM150BA6NC51 233 aa13.97□□□□□ -0.17
CPSF3-204ENST00000489403 TMEM221A6NGB7 291 aa13.97□□□□□ -0.17
CPSF3-204ENST00000489403 M0R296 226 aa13.97□□□□□ -0.17
CPSF3-204ENST00000489403 CSDE1O75534 798 aaKnown RBP13.97□□□□□ -0.17
CPSF3-204ENST00000489403 PSMD10O75832 226 aa13.97□□□□□ -0.17
CPSF3-204ENST00000489403 TDP2O95551 362 aa13.97□□□□□ -0.17
CPSF3-204ENST00000489403 PPM1AP35813 382 aa13.97□□□□□ -0.17
CPSF3-204ENST00000489403 TECP42680 631 aa13.97□□□□□ -0.17
CPSF3-204ENST00000489403 ZXDAP98168 799 aa13.97□□□□□ -0.17
CPSF3-204ENST00000489403 MTERF2Q49AM1 385 aa13.97□□□□□ -0.17
CPSF3-204ENST00000489403 Q4G0T1 1027 aa13.97□□□□□ -0.17
CPSF3-204ENST00000489403 ANKRD54Q6NXT1 300 aa13.97□□□□□ -0.17
CPSF3-204ENST00000489403 LLGL2Q6P1M3 1020 aa13.97□□□□□ -0.17
CPSF3-204ENST00000489403 B3GNT9Q6UX72 402 aa13.97□□□□□ -0.17
CPSF3-204ENST00000489403 TRIM67Q6ZTA4 783 aa13.97□□□□□ -0.17
CPSF3-204ENST00000489403 MIER3Q7Z3K6 550 aa13.97□□□□□ -0.17
CPSF3-204ENST00000489403 BMP8AQ7Z5Y6 402 aa13.97□□□□□ -0.17
CPSF3-204ENST00000489403 RNF169Q8NCN4 708 aa13.97□□□□□ -0.17
CPSF3-204ENST00000489403 RDM1Q8NG50 284 aa13.97□□□□□ -0.17
CPSF3-204ENST00000489403 SCLT1Q96NL6 688 aa13.97□□□□□ -0.17
CPSF3-204ENST00000489403 CEP89Q96ST8 783 aa13.97□□□□□ -0.17
CPSF3-204ENST00000489403 S1PR5Q9H228 398 aa13.97□□□□□ -0.17
CPSF3-204ENST00000489403 NGRNQ9NPE2 291 aaKnown RBP13.97□□□□□ -0.17
CPSF3-204ENST00000489403 SEPT9Q9UHD8 586 aaPredicted RBP13.97□□□□□ -0.17
CPSF3-204ENST00000489403 PCDHA4Q9UN74 947 aa13.97□□□□□ -0.17
CPSF3-204ENST00000489403 M0R2N6 131 aa13.96□□□□□ -0.17
CPSF3-204ENST00000489403 REC8O95072 547 aa13.96□□□□□ -0.17
CPSF3-204ENST00000489403 STBD1O95210 358 aa13.96□□□□□ -0.17
CPSF3-204ENST00000489403 SRGAP2BP0DMP2 458 aa13.96□□□□□ -0.17
CPSF3-204ENST00000489403 KRT17Q04695 432 aa13.96□□□□□ -0.17
CPSF3-204ENST00000489403 SSRP1Q08945 709 aaKnown RBP13.96□□□□□ -0.17
CPSF3-204ENST00000489403 NPY5RQ15761 445 aa13.96□□□□□ -0.17
CPSF3-204ENST00000489403 SYCE2Q6PIF2 218 aa13.96□□□□□ -0.17
CPSF3-204ENST00000489403 RUFY3Q7L099 469 aa13.96□□□□□ -0.17
CPSF3-204ENST00000489403 TMC7Q7Z402 723 aa13.96□□□□□ -0.17
CPSF3-204ENST00000489403 TRIM22Q8IYM9 498 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms