RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 TRIM9Q9C026 710 aa13.4□□□□□ -0.26
HLA-DOB-209ENST00000488325 FAM86C1Q9NVL1 165 aa13.4□□□□□ -0.26
HLA-DOB-209ENST00000488325 KIAA1024Q9UPX6 916 aa13.4□□□□□ -0.26
HLA-DOB-209ENST00000488325 NFASCO94856 1347 aa13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 CACNA1HO95180 2353 aa13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 DNAJC25-GNG10A0A024R161 153 aa13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 SOWAHBA6NEL2 793 aa13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 ASB14A6NK59 587 aa13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 DDX39AO00148 427 aaKnown RBP13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 EML1O00423 815 aa13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 B4GALT4O60513 344 aa13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 PLA2G4BP0C869 781 aa13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 EDNRBP24530 442 aa13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 ICAM3P32942 547 aa13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 PPP1R2P41236 205 aa13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 BEX3Q00994 111 aa13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 CNTN2Q02246 1040 aa13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 ZP2Q05996 745 aa13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 TCF15Q12870 199 aa13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 ITGA7Q13683 1181 aa13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 PUS10Q3MIT2 529 aaKnown RBP13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 ISM2Q6H9L7 571 aa13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 ZNF746Q6NUN9 644 aaPredicted RBP13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 CATSPER3Q86XQ3 398 aa13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 LRRC15Q8TF66 581 aa13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 EXOC1Q9NV70 894 aa13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 PKD2L1Q9P0L9 805 aa13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 GRIN2DO15399 1336 aa13.39□□□□□ -0.27
HLA-DOB-209ENST00000488325 DCHS1Q96JQ0 3298 aa13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 PVALEFA0A1B0GWK0 134 aa13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 WDR64B1ANS9 1081 aa13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 SPATA31C2B4DYI2 1134 aa13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 IKBKBO14920 756 aa13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 DHX15O43143 795 aaKnown RBP13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 DKC1O60832 514 aaKnown RBP eCLIP13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 SSBP05455 408 aaKnown RBP eCLIP13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 P4HBP07237 508 aaKnown RBP13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 SPATA31C1P0DKV0 1188 aa13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 ACTN1P12814 892 aa13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 CASP1P29466 404 aa13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 ITGB3BPQ13352 177 aaPredicted RBP13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 STIM1Q13586 685 aa13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 ACVR2BQ13705 512 aa13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 DHX8Q14562 1220 aaKnown RBP13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 IQCB1Q15051 598 aa13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 ECM1Q16610 540 aa13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 CCDC144BQ3MJ40 725 aa13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 ZNF658Q5TYW1 1059 aaPredicted RBP13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 MAMDC4Q6UXC1 1216 aa13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 LUZP1Q86V48 1076 aa13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 TPH2Q8IWU9 490 aa13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 SMAP1Q8IYB5 467 aaPredicted RBP13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 GIMAP8Q8ND71 665 aaPredicted RBP13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 DYDC2Q96IM9 177 aa13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 NACC1Q96RE7 527 aa13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 PRRX2Q99811 253 aa13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 HSD17B14Q9BPX1 270 aa13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 SENP7Q9BQF6 1050 aa13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 TECTAO75443 2155 aa13.38□□□□□ -0.27
HLA-DOB-209ENST00000488325 A0A087WWV3 80 aa13.37□□□□□ -0.27
HLA-DOB-209ENST00000488325 LCHNA4D1U4 455 aa13.37□□□□□ -0.27
HLA-DOB-209ENST00000488325 C19orf67A6NJJ6 358 aa13.37□□□□□ -0.27
HLA-DOB-209ENST00000488325 E9PMD0 336 aa13.37□□□□□ -0.27
HLA-DOB-209ENST00000488325 H3BQ06 376 aaPredicted RBP13.37□□□□□ -0.27
HLA-DOB-209ENST00000488325 SLITRK3O94933 977 aa13.37□□□□□ -0.27
HLA-DOB-209ENST00000488325 RHOBTB3O94955 611 aa13.37□□□□□ -0.27
HLA-DOB-209ENST00000488325 EYA4O95677 639 aa13.37□□□□□ -0.27
HLA-DOB-209ENST00000488325 KRT18P05783 430 aaKnown RBP13.37□□□□□ -0.27
HLA-DOB-209ENST00000488325 ERCC5P28715 1186 aaPredicted RBP13.37□□□□□ -0.27
HLA-DOB-209ENST00000488325 CYP4A11Q02928 519 aa13.37□□□□□ -0.27
HLA-DOB-209ENST00000488325 CCDC173Q0VFZ6 552 aa13.37□□□□□ -0.27
HLA-DOB-209ENST00000488325 KMT5BQ4FZB7 885 aa13.37□□□□□ -0.27
HLA-DOB-209ENST00000488325 KCNV1Q6PIU1 500 aa13.37□□□□□ -0.27
HLA-DOB-209ENST00000488325 POTEGQ6S5H5 508 aa13.37□□□□□ -0.27
HLA-DOB-209ENST00000488325 UNC13DQ70J99 1090 aa13.37□□□□□ -0.27
HLA-DOB-209ENST00000488325 KCNK18Q7Z418 384 aa13.37□□□□□ -0.27
HLA-DOB-209ENST00000488325 GPBP1Q86WP2 473 aa13.37□□□□□ -0.27
HLA-DOB-209ENST00000488325 AOPEPQ8N6M6 819 aa13.37□□□□□ -0.27
HLA-DOB-209ENST00000488325 SYT2Q8N9I0 419 aaPredicted RBP13.37□□□□□ -0.27
HLA-DOB-209ENST00000488325 ZSWIM4Q9H7M6 989 aa13.37□□□□□ -0.27
HLA-DOB-209ENST00000488325 RGL1Q9NZL6 768 aa13.37□□□□□ -0.27
HLA-DOB-209ENST00000488325 SAMM50Q9Y512 469 aa13.37□□□□□ -0.27
HLA-DOB-209ENST00000488325 LCTP09848 1927 aa13.37□□□□□ -0.27
HLA-DOB-209ENST00000488325 CACNA1GO43497 2377 aa13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 MYMKA6NI61 221 aa13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 KLRC4O43908 158 aa13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 CABYRO75952 493 aa13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 TGFB3P10600 412 aa13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 KCNA2P16389 499 aa13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 BMP6P22004 513 aa13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 IRS1P35568 1242 aa13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 SLC12A3P55017 1021 aa13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 NKX3-2P78367 333 aa13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 MYL5Q02045 173 aa13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 PSMD2Q13200 908 aa13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 CTTNQ14247 550 aaKnown RBP13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 NEDD9Q14511 834 aa13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 SEPT14Q6ZU15 432 aa13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 ZNF467Q7Z7K2 595 aaPredicted RBP13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 DHX40Q8IX18 779 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms