RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 IL27Q8NEV9 243 aa26.54■■□□□ 1.84
RNF38-208ENST00000488058 SLC7A3Q8WY07 619 aa26.54■■□□□ 1.84
RNF38-208ENST00000488058 C1orf112Q9NSG2 853 aa26.54■■□□□ 1.84
RNF38-208ENST00000488058 NOL7Q9UMY1 257 aaKnown RBP26.54■■□□□ 1.84
RNF38-208ENST00000488058 POTEMA6NI47 508 aa26.53■■□□□ 1.84
RNF38-208ENST00000488058 FGFR4P22455 802 aa26.53■■□□□ 1.84
RNF38-208ENST00000488058 CTNNB1P35222 781 aa26.53■■□□□ 1.84
RNF38-208ENST00000488058 MCM2P49736 904 aa26.53■■□□□ 1.84
RNF38-208ENST00000488058 XKR9Q5GH70 373 aa26.53■■□□□ 1.84
RNF38-208ENST00000488058 RC3H2Q9HBD1 1191 aaKnown RBP26.53■■□□□ 1.84
RNF38-208ENST00000488058 RGS18Q9NS28 235 aa26.53■■□□□ 1.84
RNF38-208ENST00000488058 PCDHB7Q9Y5E2 793 aa26.53■■□□□ 1.84
RNF38-208ENST00000488058 A0A087WZ62 844 aa26.52■■□□□ 1.84
RNF38-208ENST00000488058 ZBTB39O15060 712 aa26.52■■□□□ 1.84
RNF38-208ENST00000488058 SLITRK3O94933 977 aa26.52■■□□□ 1.84
RNF38-208ENST00000488058 DARSP14868 501 aaKnown RBP26.52■■□□□ 1.84
RNF38-208ENST00000488058 GATMP50440 423 aa26.52■■□□□ 1.84
RNF38-208ENST00000488058 PRRC2BQ5JSZ5 2229 aaKnown RBP26.52■■□□□ 1.84
RNF38-208ENST00000488058 NEK9Q8TD19 979 aa26.52■■□□□ 1.84
RNF38-208ENST00000488058 ZNF689Q96CS4 500 aaPredicted RBP26.52■■□□□ 1.84
RNF38-208ENST00000488058 FDXACB1Q9BRP7 624 aaPredicted RBP26.52■■□□□ 1.84
RNF38-208ENST00000488058 GCOM2Q9BZD3 368 aaPredicted RBP26.52■■□□□ 1.84
RNF38-208ENST00000488058 CSDE1O75534 798 aaKnown RBP26.51■■□□□ 1.83
RNF38-208ENST00000488058 OR52Z1P0C646 297 aa26.51■■□□□ 1.83
RNF38-208ENST00000488058 ZSCAN20P17040 1043 aaPredicted RBP26.51■■□□□ 1.83
RNF38-208ENST00000488058 RFC5P40937 340 aa26.51■■□□□ 1.83
RNF38-208ENST00000488058 GPM6BQ13491 265 aa26.51■■□□□ 1.83
RNF38-208ENST00000488058 MCTP1Q6DN14 999 aa26.51■■□□□ 1.83
RNF38-208ENST00000488058 SLC24A5Q71RS6 500 aa26.51■■□□□ 1.83
RNF38-208ENST00000488058 KSR1Q8IVT5 923 aa26.51■■□□□ 1.83
RNF38-208ENST00000488058 NLRP4Q96MN2 994 aa26.51■■□□□ 1.83
RNF38-208ENST00000488058 CCDC43Q96MW1 224 aaKnown RBP26.51■■□□□ 1.83
RNF38-208ENST00000488058 THEGQ9P2T0 379 aa26.51■■□□□ 1.83
RNF38-208ENST00000488058 C9IYK1 514 aa26.5■■□□□ 1.83
RNF38-208ENST00000488058 GJB2P29033 226 aa26.5■■□□□ 1.83
RNF38-208ENST00000488058 TECP42680 631 aa26.5■■□□□ 1.83
RNF38-208ENST00000488058 CDC42EP1Q00587 391 aa26.5■■□□□ 1.83
RNF38-208ENST00000488058 NBR1Q14596 966 aa26.5■■□□□ 1.83
RNF38-208ENST00000488058 FAM43BQ6ZT52 329 aaPredicted RBP26.5■■□□□ 1.83
RNF38-208ENST00000488058 CMTR2Q8IYT2 770 aaKnown RBP26.5■■□□□ 1.83
RNF38-208ENST00000488058 TMEM143Q96AN5 459 aa26.5■■□□□ 1.83
RNF38-208ENST00000488058 PPME1Q9Y570 386 aa26.5■■□□□ 1.83
RNF38-208ENST00000488058 EYSQ5T1H1 3165 aa26.5■■□□□ 1.83
RNF38-208ENST00000488058 ORC2Q13416 577 aaPredicted RBP26.49■■□□□ 1.83
RNF38-208ENST00000488058 DSC3Q14574 896 aa26.49■■□□□ 1.83
RNF38-208ENST00000488058 EMC2Q15006 297 aa26.49■■□□□ 1.83
RNF38-208ENST00000488058 EXOC8Q8IYI6 725 aa26.49■■□□□ 1.83
RNF38-208ENST00000488058 CRIPAKQ8N1N5 446 aa26.49■■□□□ 1.83
RNF38-208ENST00000488058 HSD17B14Q9BPX1 270 aa26.49■■□□□ 1.83
RNF38-208ENST00000488058 DHX33Q9H6R0 707 aaKnown RBP26.49■■□□□ 1.83
RNF38-208ENST00000488058 RNF216Q9NWF9 866 aaPredicted RBP26.49■■□□□ 1.83
RNF38-208ENST00000488058 LMCD1Q9NZU5 365 aa26.49■■□□□ 1.83
RNF38-208ENST00000488058 SMC3Q9UQE7 1217 aa26.49■■□□□ 1.83
RNF38-208ENST00000488058 RWDD3Q9Y3V2 267 aa26.49■■□□□ 1.83
RNF38-208ENST00000488058 MRPL42Q9Y6G3 142 aaKnown RBP26.49■■□□□ 1.83
RNF38-208ENST00000488058 KIAA1671Q9BY89 1806 aa26.49■■□□□ 1.83
RNF38-208ENST00000488058 H3BNC9 293 aa26.48■■□□□ 1.83
RNF38-208ENST00000488058 DLL1O00548 723 aa26.48■■□□□ 1.83
RNF38-208ENST00000488058 U2AF2P26368 475 aaKnown RBP eCLIP26.48■■□□□ 1.83
RNF38-208ENST00000488058 TRAPPC10P48553 1259 aa26.48■■□□□ 1.83
RNF38-208ENST00000488058 ZNF410Q86VK4 478 aa26.48■■□□□ 1.83
RNF38-208ENST00000488058 ATP6V0A4Q9HBG4 840 aa26.48■■□□□ 1.83
RNF38-208ENST00000488058 COL4A3BPQ9Y5P4 624 aa26.48■■□□□ 1.83
RNF38-208ENST00000488058 A0A087WWV3 80 aa26.47■■□□□ 1.83
RNF38-208ENST00000488058 H3BQV1 296 aa26.47■■□□□ 1.83
RNF38-208ENST00000488058 BMPR1AP36894 532 aa26.47■■□□□ 1.83
RNF38-208ENST00000488058 PSPC1Q8WXF1 523 aaKnown RBP26.47■■□□□ 1.83
RNF38-208ENST00000488058 MTRQ99707 1265 aa26.47■■□□□ 1.83
RNF38-208ENST00000488058 BACH2Q9BYV9 841 aa26.47■■□□□ 1.83
RNF38-208ENST00000488058 INO80BQ9C086 356 aaPredicted RBP26.47■■□□□ 1.83
RNF38-208ENST00000488058 TBKBP1A7MCY6 615 aa26.46■■□□□ 1.83
RNF38-208ENST00000488058 LYPLA2O95372 231 aa26.46■■□□□ 1.83
RNF38-208ENST00000488058 SFPQP23246 707 aaKnown RBP eCLIP26.46■■□□□ 1.83
RNF38-208ENST00000488058 PTPROQ16827 1216 aa26.46■■□□□ 1.83
RNF38-208ENST00000488058 SPOUT1Q5T280 376 aaKnown RBP26.46■■□□□ 1.83
RNF38-208ENST00000488058 FAM102BQ5T8I3 360 aa26.46■■□□□ 1.83
RNF38-208ENST00000488058 RNF169Q8NCN4 708 aa26.46■■□□□ 1.83
RNF38-208ENST00000488058 PIGOQ8TEQ8 1089 aa26.46■■□□□ 1.83
RNF38-208ENST00000488058 TCP11Q8WWU5 503 aa26.46■■□□□ 1.83
RNF38-208ENST00000488058 PRPF31Q8WWY3 499 aaKnown RBP26.46■■□□□ 1.83
RNF38-208ENST00000488058 TMEM161AQ9NX61 479 aa26.46■■□□□ 1.83
RNF38-208ENST00000488058 FNDC1Q4ZHG4 1894 aaPredicted RBP26.46■■□□□ 1.83
RNF38-208ENST00000488058 CSPG5O95196 566 aa26.45■■□□□ 1.82
RNF38-208ENST00000488058 LINC00271P0C7V0 271 aa26.45■■□□□ 1.82
RNF38-208ENST00000488058 SRGAP2CP0DJJ0 459 aa26.45■■□□□ 1.82
RNF38-208ENST00000488058 FGFR1P11362 822 aa26.45■■□□□ 1.82
RNF38-208ENST00000488058 ERMNQ8TAM6 284 aa26.45■■□□□ 1.82
RNF38-208ENST00000488058 CLP1Q92989 425 aaKnown RBP26.45■■□□□ 1.82
RNF38-208ENST00000488058 MRPL38Q96DV4 380 aaKnown RBP26.45■■□□□ 1.82
RNF38-208ENST00000488058 C11orf84Q9BUA3 381 aaPredicted RBP26.45■■□□□ 1.82
RNF38-208ENST00000488058 ANKEF1Q9NU02 776 aa26.45■■□□□ 1.82
RNF38-208ENST00000488058 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.45■■□□□ 1.82
RNF38-208ENST00000488058 PCDHB6Q9Y5E3 794 aa26.45■■□□□ 1.82
RNF38-208ENST00000488058 GAS2O43903 313 aaKnown RBP26.44■■□□□ 1.82
RNF38-208ENST00000488058 RB1P06400 928 aa26.44■■□□□ 1.82
RNF38-208ENST00000488058 LAMTOR4Q0VGL1 99 aa26.44■■□□□ 1.82
RNF38-208ENST00000488058 CATSPER4Q7RTX7 472 aa26.44■■□□□ 1.82
RNF38-208ENST00000488058 ELAC1Q9H777 363 aaKnown RBP26.44■■□□□ 1.82
RNF38-208ENST00000488058 TUFT1Q9NNX1 390 aa26.44■■□□□ 1.82
RNF38-208ENST00000488058 C5orf67F2Z3F1 127 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms