RNA–Protein interactions for RNA: ENST00000487935.1

OPTN-212, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 511 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-212ENST00000487935 DSC3Q14574 896 aa13.76□□□□□ -0.21
OPTN-212ENST00000487935 PDE12Q6L8Q7 609 aaKnown RBP13.76□□□□□ -0.21
OPTN-212ENST00000487935 PIAS4Q8N2W9 510 aaPredicted RBP13.76□□□□□ -0.21
OPTN-212ENST00000487935 LRRC71Q8N4P6 559 aa13.76□□□□□ -0.21
OPTN-212ENST00000487935 LINC01465Q8N7H1 131 aa13.76□□□□□ -0.21
OPTN-212ENST00000487935 SMRP1Q8NCR6 262 aa13.76□□□□□ -0.21
OPTN-212ENST00000487935 RIT2Q99578 217 aa13.76□□□□□ -0.21
OPTN-212ENST00000487935 TEKT3Q9BXF9 490 aa13.76□□□□□ -0.21
OPTN-212ENST00000487935 SLKQ9H2G2 1235 aaPredicted RBP13.76□□□□□ -0.21
OPTN-212ENST00000487935 CWH43Q9H720 699 aa13.76□□□□□ -0.21
OPTN-212ENST00000487935 SH3GLB2Q9NR46 395 aa13.76□□□□□ -0.21
OPTN-212ENST00000487935 PCDHGC5Q9Y5F6 944 aa13.76□□□□□ -0.21
OPTN-212ENST00000487935 ZNF862O60290 1169 aa13.75□□□□□ -0.21
OPTN-212ENST00000487935 GAS7O60861 476 aa13.75□□□□□ -0.21
OPTN-212ENST00000487935 LARGE1O95461 756 aa13.75□□□□□ -0.21
OPTN-212ENST00000487935 GLP2RO95838 553 aa13.75□□□□□ -0.21
OPTN-212ENST00000487935 EIF4BP23588 611 aaKnown RBP13.75□□□□□ -0.21
OPTN-212ENST00000487935 SFNP31947 248 aa13.75□□□□□ -0.21
OPTN-212ENST00000487935 JAK3P52333 1124 aa13.75□□□□□ -0.21
OPTN-212ENST00000487935 HERC4Q5GLZ8 1057 aaPredicted RBP13.75□□□□□ -0.21
OPTN-212ENST00000487935 LRCH2Q5VUJ6 765 aa13.75□□□□□ -0.21
OPTN-212ENST00000487935 RNF135Q8IUD6 432 aa13.75□□□□□ -0.21
OPTN-212ENST00000487935 ZNF274Q96GC6 653 aaPredicted RBP13.75□□□□□ -0.21
OPTN-212ENST00000487935 CDCA3Q99618 268 aaPredicted RBP13.75□□□□□ -0.21
OPTN-212ENST00000487935 TMEM117Q9H0C3 514 aa13.75□□□□□ -0.21
OPTN-212ENST00000487935 ADAMTS10Q9H324 1103 aa13.75□□□□□ -0.21
OPTN-212ENST00000487935 NCOA5Q9HCD5 579 aaKnown RBP13.75□□□□□ -0.21
OPTN-212ENST00000487935 HCSTQ9UBK5 93 aa13.75□□□□□ -0.21
OPTN-212ENST00000487935 PUF60Q9UHX1 559 aaKnown RBP13.75□□□□□ -0.21
OPTN-212ENST00000487935 MUTYHQ9UIF7 546 aa13.75□□□□□ -0.21
OPTN-212ENST00000487935 BARX2Q9UMQ3 279 aaPredicted RBP13.75□□□□□ -0.21
OPTN-212ENST00000487935 LIMCH1Q9UPQ0 1083 aa13.75□□□□□ -0.21
OPTN-212ENST00000487935 CPLX1O14810 134 aa13.74□□□□□ -0.21
OPTN-212ENST00000487935 PER2O15055 1255 aa13.74□□□□□ -0.21
OPTN-212ENST00000487935 CHMP2AO43633 222 aa13.74□□□□□ -0.21
OPTN-212ENST00000487935 EDIL3O43854 480 aa13.74□□□□□ -0.21
OPTN-212ENST00000487935 ERVFC1P60507 584 aa13.74□□□□□ -0.21
OPTN-212ENST00000487935 PLCB3Q01970 1234 aa13.74□□□□□ -0.21
OPTN-212ENST00000487935 PRKCEQ02156 737 aa13.74□□□□□ -0.21
OPTN-212ENST00000487935 SSRP1Q08945 709 aaKnown RBP13.74□□□□□ -0.21
OPTN-212ENST00000487935 ME3Q16798 604 aa13.74□□□□□ -0.21
OPTN-212ENST00000487935 TRIM22Q8IYM9 498 aa13.74□□□□□ -0.21
OPTN-212ENST00000487935 ABI1Q8IZP0 508 aa13.74□□□□□ -0.21
OPTN-212ENST00000487935 TBCKQ8TEA7 893 aa13.74□□□□□ -0.21
OPTN-212ENST00000487935 MRPS27Q92552 414 aaKnown RBP13.74□□□□□ -0.21
OPTN-212ENST00000487935 SLC5A5Q92911 643 aa13.74□□□□□ -0.21
OPTN-212ENST00000487935 CASD1Q96PB1 797 aa13.74□□□□□ -0.21
OPTN-212ENST00000487935 UNC45AQ9H3U1 944 aa13.74□□□□□ -0.21
OPTN-212ENST00000487935 LZTS1Q9Y250 596 aa13.74□□□□□ -0.21
OPTN-212ENST00000487935 FSCN2O14926 492 aa13.73□□□□□ -0.21
OPTN-212ENST00000487935 PFKFB2O60825 505 aa13.73□□□□□ -0.21
OPTN-212ENST00000487935 CD2BP2O95400 341 aaKnown RBP13.73□□□□□ -0.21
OPTN-212ENST00000487935 SRGAP2BP0DMP2 458 aa13.73□□□□□ -0.21
OPTN-212ENST00000487935 MCM2P49736 904 aa13.73□□□□□ -0.21
OPTN-212ENST00000487935 GPC3P51654 580 aa13.73□□□□□ -0.21
OPTN-212ENST00000487935 TBC1D8BQ0IIM8 1120 aa13.73□□□□□ -0.21
OPTN-212ENST00000487935 SCRN1Q12765 414 aa13.73□□□□□ -0.21
OPTN-212ENST00000487935 UGCGQ16739 394 aa13.73□□□□□ -0.21
OPTN-212ENST00000487935 DUSP6Q16828 381 aa13.73□□□□□ -0.21
OPTN-212ENST00000487935 Q4G0T1 1027 aa13.73□□□□□ -0.21
OPTN-212ENST00000487935 CPLX2Q6PUV4 134 aaKnown RBP13.73□□□□□ -0.21
OPTN-212ENST00000487935 MIER3Q7Z3K6 550 aa13.73□□□□□ -0.21
OPTN-212ENST00000487935 ECHDC2Q86YB7 292 aa13.73□□□□□ -0.21
OPTN-212ENST00000487935 LRRC43Q8N309 656 aa13.73□□□□□ -0.21
OPTN-212ENST00000487935 NECAB1Q8N987 351 aa13.73□□□□□ -0.21
OPTN-212ENST00000487935 RDM1Q8NG50 284 aa13.73□□□□□ -0.21
OPTN-212ENST00000487935 ZNF668Q96K58 619 aaPredicted RBP13.73□□□□□ -0.21
OPTN-212ENST00000487935 ZSCAN31Q96LW9 406 aaPredicted RBP13.73□□□□□ -0.21
OPTN-212ENST00000487935 ZNF558Q96NG5 402 aa13.73□□□□□ -0.21
OPTN-212ENST00000487935 SCLT1Q96NL6 688 aa13.73□□□□□ -0.21
OPTN-212ENST00000487935 KCNH6Q9H252 994 aa13.73□□□□□ -0.21
OPTN-212ENST00000487935 RNF19AQ9NV58 838 aa13.73□□□□□ -0.21
OPTN-212ENST00000487935 PCDHA4Q9UN74 947 aa13.73□□□□□ -0.21
OPTN-212ENST00000487935 USP15Q9Y4E8 981 aaPredicted RBP13.73□□□□□ -0.21
OPTN-212ENST00000487935 LOC730098B7Z3J9 87 aa13.72□□□□□ -0.21
OPTN-212ENST00000487935 PSMD10O75832 226 aa13.72□□□□□ -0.21
OPTN-212ENST00000487935 DARSP14868 501 aaKnown RBP13.72□□□□□ -0.21
OPTN-212ENST00000487935 PPM1AP35813 382 aa13.72□□□□□ -0.21
OPTN-212ENST00000487935 CDC42EP1Q00587 391 aa13.72□□□□□ -0.21
OPTN-212ENST00000487935 KRT17Q04695 432 aa13.72□□□□□ -0.21
OPTN-212ENST00000487935 PLPP4Q5VZY2 271 aa13.72□□□□□ -0.21
OPTN-212ENST00000487935 KCNT2Q6UVM3 1135 aa13.72□□□□□ -0.21
OPTN-212ENST00000487935 LRRC55Q6ZSA7 311 aa13.72□□□□□ -0.21
OPTN-212ENST00000487935 HFE2Q6ZVN8 426 aa13.72□□□□□ -0.21
OPTN-212ENST00000487935 RNF169Q8NCN4 708 aa13.72□□□□□ -0.21
OPTN-212ENST00000487935 NLRP7Q8WX94 980 aa13.72□□□□□ -0.21
OPTN-212ENST00000487935 EDAQ92838 391 aa13.72□□□□□ -0.21
OPTN-212ENST00000487935 GTF3C6Q969F1 213 aa13.72□□□□□ -0.21
OPTN-212ENST00000487935 MFSD14AQ96MC6 490 aa13.72□□□□□ -0.21
OPTN-212ENST00000487935 PHF7Q9BWX1 381 aaPredicted RBP13.72□□□□□ -0.21
OPTN-212ENST00000487935 NGRNQ9NPE2 291 aaKnown RBP13.72□□□□□ -0.21
OPTN-212ENST00000487935 ENTPD7Q9NQZ7 604 aa13.72□□□□□ -0.21
OPTN-212ENST00000487935 SEPT9Q9UHD8 586 aaPredicted RBP13.72□□□□□ -0.21
OPTN-212ENST00000487935 CYP3A7-CYP3A51PA0A087WV96 503 aa13.71□□□□□ -0.21
OPTN-212ENST00000487935 A0A0U1RQF3 1178 aa13.71□□□□□ -0.21
OPTN-212ENST00000487935 DEXIO95424 95 aa13.71□□□□□ -0.21
OPTN-212ENST00000487935 EOMESO95936 686 aa13.71□□□□□ -0.21
OPTN-212ENST00000487935 ATF7P17544 494 aaPredicted RBP13.71□□□□□ -0.21
OPTN-212ENST00000487935 FGFR4P22455 802 aa13.71□□□□□ -0.21
OPTN-212ENST00000487935 CYP3A7P24462 503 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms