RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 SPATA31D4Q6ZUB0 917 aa6.79□□□□□ -1.32
COL4A3-206ENST00000487633 SLC24A5Q71RS6 500 aa6.79□□□□□ -1.32
COL4A3-206ENST00000487633 CABP7Q86V35 215 aa6.79□□□□□ -1.32
COL4A3-206ENST00000487633 ZNF687Q8N1G0 1237 aa6.79□□□□□ -1.32
COL4A3-206ENST00000487633 HELQQ8TDG4 1101 aa6.79□□□□□ -1.32
COL4A3-206ENST00000487633 PANK1Q8TE04 598 aa6.79□□□□□ -1.32
COL4A3-206ENST00000487633 ZNF668Q96K58 619 aaPredicted RBP6.79□□□□□ -1.32
COL4A3-206ENST00000487633 INPP4AQ96PE3 977 aaPredicted RBP6.79□□□□□ -1.32
COL4A3-206ENST00000487633 SFXN1Q9H9B4 322 aa6.79□□□□□ -1.32
COL4A3-206ENST00000487633 LTB4R2Q9NPC1 389 aa6.79□□□□□ -1.32
COL4A3-206ENST00000487633 PRMT8Q9NR22 394 aaPredicted RBP6.79□□□□□ -1.32
COL4A3-206ENST00000487633 SLC2A4RGQ9NR83 387 aa6.79□□□□□ -1.32
COL4A3-206ENST00000487633 SPG21Q9NZD8 308 aa6.79□□□□□ -1.32
COL4A3-206ENST00000487633 PUF60Q9UHX1 559 aaKnown RBP6.79□□□□□ -1.32
COL4A3-206ENST00000487633 GMEB2Q9UKD1 530 aa6.79□□□□□ -1.32
COL4A3-206ENST00000487633 UNC79Q9P2D8 2635 aa6.79□□□□□ -1.32
COL4A3-206ENST00000487633 NEDD4P46934 1319 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 ATG2BQ96BY7 2078 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 CCDC195A0A1B0GUA6 201 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 TBC1D4O60343 1298 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 LILRB3O75022 631 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 PRB1P04280 392 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 TGFB3P10600 412 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 CTSAP10619 480 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 LAMP2P13473 410 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 KCNA2P16389 499 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 FGFR4P22455 802 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 HAND2P61296 217 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 NTHL1P78549 312 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 GAS6Q14393 721 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 CSRP2Q16527 193 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 ZMYM1Q5SVZ6 1142 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 ZKSCAN2Q63HK3 967 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 ZSCAN25Q6NSZ9 544 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 PSAPL1Q6NUJ1 521 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 KCNV1Q6PIU1 500 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 GET4Q7L5D6 327 aaPredicted RBP6.78□□□□□ -1.32
COL4A3-206ENST00000487633 TAS1R1Q7RTX1 841 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 TBC1D10CQ8IV04 446 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 ADAM32Q8TC27 787 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 OSMRQ99650 979 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 PLA2G2FQ9BZM2 168 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 TMEM117Q9H0C3 514 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 ATP6V0A4Q9HBG4 840 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 WDR6Q9NNW5 1121 aaKnown RBP6.78□□□□□ -1.32
COL4A3-206ENST00000487633 TOMM22Q9NS69 142 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 TCP11L1Q9NUJ3 509 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 DZANK1Q9NVP4 752 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 TMEM161AQ9NX61 479 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 DNAJB4Q9UDY4 337 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 DACH1Q9UI36 760 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 ANAPC4Q9UJX5 808 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 MRPL11Q9Y3B7 192 aaKnown RBP6.78□□□□□ -1.32
COL4A3-206ENST00000487633 SQORQ9Y6N5 450 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 PDCD11Q14690 1871 aaKnown RBP6.78□□□□□ -1.32
COL4A3-206ENST00000487633 TENM4Q6N022 2769 aa6.78□□□□□ -1.32
COL4A3-206ENST00000487633 CLUHO75153 1309 aa6.77□□□□□ -1.32
COL4A3-206ENST00000487633 KDM3AQ9Y4C1 1321 aa6.77□□□□□ -1.32
COL4A3-206ENST00000487633 F5P12259 2224 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 SHROOM3Q8TF72 1996 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 DENND3A2RUS2 1198 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 F8W810 466 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 INPPL1O15357 1258 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 IPO8O15397 1037 aaKnown RBP6.77□□□□□ -1.33
COL4A3-206ENST00000487633 RPS6KA5O75582 802 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 RETP07949 1114 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 GNAT2P19087 354 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 CCND2P30279 289 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 AFF1P51825 1210 aaKnown RBP6.77□□□□□ -1.33
COL4A3-206ENST00000487633 KRT76Q01546 638 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 KRT17Q04695 432 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 MLF2Q15773 248 aaPredicted RBP6.77□□□□□ -1.33
COL4A3-206ENST00000487633 KIZQ2M2Z5 673 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 SLC44A4Q53GD3 710 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 WDR44Q5JSH3 913 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 IER5Q5VY09 327 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 TCEAL6Q6IPX3 200 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 MTHFD1LQ6UB35 978 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 RSPH3Q86UC2 560 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 ZNF598Q86UK7 904 aaKnown RBP6.77□□□□□ -1.33
COL4A3-206ENST00000487633 MCF2L2Q86YR7 1114 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 KIAA0319LQ8IZA0 1049 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 RNF169Q8NCN4 708 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 OTUD7AQ8TE49 926 aaPredicted RBP6.77□□□□□ -1.33
COL4A3-206ENST00000487633 ZCCHC14Q8WYQ9 949 aaKnown RBP6.77□□□□□ -1.33
COL4A3-206ENST00000487633 GLG1Q92896 1179 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 LPPQ93052 612 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 TCEAL3Q969E4 200 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 CLDN23Q96B33 292 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 BCO2Q9BYV7 579 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 ADAM33Q9BZ11 813 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 NRDE2Q9H7Z3 1164 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 MAN1C1Q9NR34 630 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 ZNF215Q9UL58 517 aaPredicted RBP6.77□□□□□ -1.33
COL4A3-206ENST00000487633 PCDHA2Q9Y5H9 948 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 PCDHA1Q9Y5I3 950 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 IRAK3Q9Y616 596 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 PLXNB3Q9ULL4 1909 aa6.77□□□□□ -1.33
COL4A3-206ENST00000487633 KIF26AQ9ULI4 1882 aaPredicted RBP6.77□□□□□ -1.33
COL4A3-206ENST00000487633 FRMPD4Q14CM0 1322 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms