RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 GNA14O95837 355 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 GM2AP17900 193 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 ALDH3A1P30838 453 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 RPL21P46778 160 aaKnown RBP11.51□□□□□ -0.57
CCDC171-208ENST00000486641 NPEPPSP55786 919 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 LAMB3Q13751 1172 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 ZC3H12AQ5D1E8 599 aaKnown RBP11.51□□□□□ -0.57
CCDC171-208ENST00000486641 RNF220Q5VTB9 566 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 VSTM1Q6UX27 236 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 KRT25Q7Z3Z0 450 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 GDAP1Q8TB36 358 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 PIGOQ8TEQ8 1089 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 STK32AQ8WU08 396 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 RPS6KC1Q96S38 1066 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 IL17RBQ9NRM6 502 aa11.51□□□□□ -0.57
CCDC171-208ENST00000486641 DDX3XO00571 662 aaKnown RBP eCLIP11.5□□□□□ -0.57
CCDC171-208ENST00000486641 ABLIM1O14639 778 aa11.5□□□□□ -0.57
CCDC171-208ENST00000486641 RNF8O76064 485 aa11.5□□□□□ -0.57
CCDC171-208ENST00000486641 SKIV2L2P42285 1042 aaKnown RBP11.5□□□□□ -0.57
CCDC171-208ENST00000486641 PTGIRP43119 386 aa11.5□□□□□ -0.57
CCDC171-208ENST00000486641 GALCP54803 685 aa11.5□□□□□ -0.57
CCDC171-208ENST00000486641 MAPK7Q13164 816 aa11.5□□□□□ -0.57
CCDC171-208ENST00000486641 DHX34Q14147 1143 aaKnown RBP11.5□□□□□ -0.57
CCDC171-208ENST00000486641 GRM4Q14833 912 aa11.5□□□□□ -0.57
CCDC171-208ENST00000486641 LONRF1Q17RB8 773 aa11.5□□□□□ -0.57
CCDC171-208ENST00000486641 SGSM1Q2NKQ1 1148 aa11.5□□□□□ -0.57
CCDC171-208ENST00000486641 SLC4A8Q2Y0W8 1093 aa11.5□□□□□ -0.57
CCDC171-208ENST00000486641 ECHDC2Q86YB7 292 aa11.5□□□□□ -0.57
CCDC171-208ENST00000486641 ANKRD42Q8N9B4 389 aa11.5□□□□□ -0.57
CCDC171-208ENST00000486641 TBCKQ8TEA7 893 aa11.5□□□□□ -0.57
CCDC171-208ENST00000486641 U2AF1L4Q8WU68 220 aaKnown RBP11.5□□□□□ -0.57
CCDC171-208ENST00000486641 CKAP2Q8WWK9 683 aa11.5□□□□□ -0.57
CCDC171-208ENST00000486641 DNAJC19Q96DA6 116 aa11.5□□□□□ -0.57
CCDC171-208ENST00000486641 C18orf8Q96DM3 657 aa11.5□□□□□ -0.57
CCDC171-208ENST00000486641 PLCD4Q9BRC7 762 aa11.5□□□□□ -0.57
CCDC171-208ENST00000486641 CYP39A1Q9NYL5 469 aa11.5□□□□□ -0.57
CCDC171-208ENST00000486641 PCDH11XQ9BZA7 1347 aa11.5□□□□□ -0.57
CCDC171-208ENST00000486641 PCDH11YQ9BZA8 1340 aa11.5□□□□□ -0.57
CCDC171-208ENST00000486641 POTEMA6NI47 508 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 E7ENQ6 273 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 GH1P01241 217 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 SP100P23497 879 aaPredicted RBP11.49□□□□□ -0.57
CCDC171-208ENST00000486641 RFC5P40937 340 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 PRKCIP41743 596 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 ECM1Q16610 540 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 CMPK2Q5EBM0 449 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 RNF43Q68DV7 783 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 MFSD5Q6N075 450 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 AADACL2Q6P093 401 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 SLC35G2Q8TBE7 412 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 EZH1Q92800 747 aaPredicted RBP11.49□□□□□ -0.57
CCDC171-208ENST00000486641 ARHGEF2Q92974 986 aaKnown RBP11.49□□□□□ -0.57
CCDC171-208ENST00000486641 MTMR9Q96QG7 549 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 EPAS1Q99814 870 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 CPVLQ9H3G5 476 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 KCNK9Q9NPC2 374 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 RGL1Q9NZL6 768 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 KLHL14Q9P2G3 628 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 AJAP1Q9UKB5 411 aaPredicted RBP11.49□□□□□ -0.57
CCDC171-208ENST00000486641 CACNA1SQ13698 1873 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 LRP5O75197 1615 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 PAPPAQ13219 1627 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 TNS2Q63HR2 1409 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 FAM170AA1A519 330 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 SMCO2A6NFE2 343 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 WTIPA6NIX2 430 aaPredicted RBP11.49□□□□□ -0.57
CCDC171-208ENST00000486641 KRT13P13646 458 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 PON1P27169 355 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 GYG1P46976 350 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 NAPAP54920 295 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 TFAP4Q01664 338 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 KLC1Q07866 573 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 MPP2Q14168 576 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 PPP2R5EQ16537 467 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 PARP6Q2NL67 630 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 FAM26FQ5R3K3 315 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 SAMD1Q6SPF0 538 aaPredicted RBP11.49□□□□□ -0.57
CCDC171-208ENST00000486641 APLFQ8IW19 511 aaPredicted RBP11.49□□□□□ -0.57
CCDC171-208ENST00000486641 TMEM237Q96Q45 408 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 DDX23Q9BUQ8 820 aaKnown RBP11.49□□□□□ -0.57
CCDC171-208ENST00000486641 DCP1AQ9NPI6 582 aaPredicted RBP11.49□□□□□ -0.57
CCDC171-208ENST00000486641 DLGAP2Q9P1A6 1054 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 BIN2Q9UBW5 565 aaPredicted RBP11.49□□□□□ -0.57
CCDC171-208ENST00000486641 A0A1B0GUL6 1792 aa11.49□□□□□ -0.57
CCDC171-208ENST00000486641 AFPP02771 609 aaKnown RBP11.48□□□□□ -0.57
CCDC171-208ENST00000486641 PYGLP06737 847 aa11.48□□□□□ -0.57
CCDC171-208ENST00000486641 GOLGA8HP0CJ92 632 aa11.48□□□□□ -0.57
CCDC171-208ENST00000486641 RARGP13631 454 aa11.48□□□□□ -0.57
CCDC171-208ENST00000486641 PLCG2P16885 1265 aa11.48□□□□□ -0.57
CCDC171-208ENST00000486641 PTDSS1P48651 473 aaKnown RBP11.48□□□□□ -0.57
CCDC171-208ENST00000486641 RBM5P52756 815 aaKnown RBP eCLIP11.48□□□□□ -0.57
CCDC171-208ENST00000486641 PPATQ06203 517 aa11.48□□□□□ -0.57
CCDC171-208ENST00000486641 CALCRLQ16602 461 aa11.48□□□□□ -0.57
CCDC171-208ENST00000486641 LONP2Q86WA8 852 aa11.48□□□□□ -0.57
CCDC171-208ENST00000486641 FAM13CQ8NE31 585 aa11.48□□□□□ -0.57
CCDC171-208ENST00000486641 SUPT20HQ8NEM7 779 aa11.48□□□□□ -0.57
CCDC171-208ENST00000486641 ASAP3Q8TDY4 903 aa11.48□□□□□ -0.57
CCDC171-208ENST00000486641 SNX29Q8TEQ0 813 aa11.48□□□□□ -0.57
CCDC171-208ENST00000486641 FAM210AQ96ND0 272 aa11.48□□□□□ -0.57
CCDC171-208ENST00000486641 TGS1Q96RS0 853 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms