RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 CHST13Q8NET6 341 aa22.28■■□□□ 1.16
HPS3-206ENST00000486530 RABGGTAQ92696 567 aa22.28■■□□□ 1.16
HPS3-206ENST00000486530 ST6GALNAC4Q9H4F1 302 aa22.28■■□□□ 1.16
HPS3-206ENST00000486530 ANO9A1A5B4 782 aa22.28■■□□□ 1.16
HPS3-206ENST00000486530 BACH1O14867 736 aa22.28■■□□□ 1.16
HPS3-206ENST00000486530 DKC1O60832 514 aaKnown RBP eCLIP22.28■■□□□ 1.16
HPS3-206ENST00000486530 UCHL3P15374 230 aa22.28■■□□□ 1.16
HPS3-206ENST00000486530 APBA1Q02410 837 aa22.28■■□□□ 1.16
HPS3-206ENST00000486530 PPP2R5AQ15172 486 aa22.28■■□□□ 1.16
HPS3-206ENST00000486530 ASIC2Q16515 512 aa22.28■■□□□ 1.16
HPS3-206ENST00000486530 TEX35Q5T0J7 233 aa22.28■■□□□ 1.16
HPS3-206ENST00000486530 ERO1BQ86YB8 467 aa22.28■■□□□ 1.16
HPS3-206ENST00000486530 TMEM174Q8WUU8 243 aa22.28■■□□□ 1.16
HPS3-206ENST00000486530 ACCSQ96QU6 501 aa22.28■■□□□ 1.16
HPS3-206ENST00000486530 LUC7LQ9NQ29 371 aaKnown RBP22.28■■□□□ 1.16
HPS3-206ENST00000486530 ARGLU1Q9NWB6 273 aaPredicted RBP22.28■■□□□ 1.16
HPS3-206ENST00000486530 PJA2O43164 708 aa22.27■■□□□ 1.16
HPS3-206ENST00000486530 ACTN1P12814 892 aa22.27■■□□□ 1.16
HPS3-206ENST00000486530 MAGEA1P43355 309 aa22.27■■□□□ 1.16
HPS3-206ENST00000486530 CYP2J2P51589 502 aa22.27■■□□□ 1.16
HPS3-206ENST00000486530 GNPTABQ3T906 1256 aa22.27■■□□□ 1.16
HPS3-206ENST00000486530 TRAPPC11Q7Z392 1133 aa22.27■■□□□ 1.16
HPS3-206ENST00000486530 GCNT4Q9P109 453 aa22.27■■□□□ 1.16
HPS3-206ENST00000486530 MACROD2A1Z1Q3 448 aa22.26■■□□□ 1.15
HPS3-206ENST00000486530 IRF6O14896 467 aa22.26■■□□□ 1.15
HPS3-206ENST00000486530 RGS20O76081 388 aa22.26■■□□□ 1.15
HPS3-206ENST00000486530 XKR9Q5GH70 373 aa22.26■■□□□ 1.15
HPS3-206ENST00000486530 UTP14CQ5TAP6 766 aaKnown RBP22.26■■□□□ 1.15
HPS3-206ENST00000486530 PAPD7Q5XG87 772 aaKnown RBP22.26■■□□□ 1.15
HPS3-206ENST00000486530 TRIM58Q8NG06 486 aa22.26■■□□□ 1.15
HPS3-206ENST00000486530 ATP6V0A1Q93050 837 aa22.26■■□□□ 1.15
HPS3-206ENST00000486530 SPAG5Q96R06 1193 aa22.26■■□□□ 1.15
HPS3-206ENST00000486530 IWS1Q96ST2 819 aa22.26■■□□□ 1.15
HPS3-206ENST00000486530 SCN4AP35499 1836 aa22.26■■□□□ 1.15
HPS3-206ENST00000486530 A0A0G2JLL6 359 aaPredicted RBP22.26■■□□□ 1.15
HPS3-206ENST00000486530 GFPT1Q06210 699 aaPredicted RBP22.26■■□□□ 1.15
HPS3-206ENST00000486530 KLHL30Q0D2K2 578 aa22.26■■□□□ 1.15
HPS3-206ENST00000486530 PRRT2Q7Z6L0 340 aaPredicted RBP22.26■■□□□ 1.15
HPS3-206ENST00000486530 PNMA8AQ86V59 439 aaPredicted RBP22.26■■□□□ 1.15
HPS3-206ENST00000486530 C12orf56Q8IXR9 622 aa22.26■■□□□ 1.15
HPS3-206ENST00000486530 FAM133AQ8N9E0 248 aa22.26■■□□□ 1.15
HPS3-206ENST00000486530 JPH1Q9HDC5 661 aaPredicted RBP22.26■■□□□ 1.15
HPS3-206ENST00000486530 FHOD1Q9Y613 1164 aa22.26■■□□□ 1.15
HPS3-206ENST00000486530 DUSP10Q9Y6W6 482 aa22.26■■□□□ 1.15
HPS3-206ENST00000486530 SPDYE5A6NIY4 337 aa22.25■■□□□ 1.15
HPS3-206ENST00000486530 CXCL11O14625 94 aa22.25■■□□□ 1.15
HPS3-206ENST00000486530 EXOC3O60645 756 aa22.25■■□□□ 1.15
HPS3-206ENST00000486530 TACC1O75410 805 aa22.25■■□□□ 1.15
HPS3-206ENST00000486530 PSAPP07602 524 aa22.25■■□□□ 1.15
HPS3-206ENST00000486530 NCKAP1LP55160 1127 aa22.25■■□□□ 1.15
HPS3-206ENST00000486530 SNRPFP62306 86 aaKnown RBP22.25■■□□□ 1.15
HPS3-206ENST00000486530 GTF2BQ00403 316 aa22.25■■□□□ 1.15
HPS3-206ENST00000486530 TTLL12Q14166 644 aaPredicted RBP22.25■■□□□ 1.15
HPS3-206ENST00000486530 PLA2G4FQ68DD2 849 aa22.25■■□□□ 1.15
HPS3-206ENST00000486530 LBX2Q6XYB7 198 aa22.25■■□□□ 1.15
HPS3-206ENST00000486530 OTUD6AQ7L8S5 288 aa22.25■■□□□ 1.15
HPS3-206ENST00000486530 GPIHBP1Q8IV16 184 aa22.25■■□□□ 1.15
HPS3-206ENST00000486530 DNERQ8NFT8 737 aa22.25■■□□□ 1.15
HPS3-206ENST00000486530 OTUD5Q96G74 571 aa22.25■■□□□ 1.15
HPS3-206ENST00000486530 SIX2Q9NPC8 291 aa22.25■■□□□ 1.15
HPS3-206ENST00000486530 PUF60Q9UHX1 559 aaKnown RBP22.25■■□□□ 1.15
HPS3-206ENST00000486530 BZW2Q9Y6E2 419 aaKnown RBP22.25■■□□□ 1.15
HPS3-206ENST00000486530 MYH9P35579 1960 aaKnown RBP22.25■■□□□ 1.15
HPS3-206ENST00000486530 TMEM150BA6NC51 233 aa22.24■■□□□ 1.15
HPS3-206ENST00000486530 ATP1A1P05023 1023 aaKnown RBP22.24■■□□□ 1.15
HPS3-206ENST00000486530 FMO5P49326 533 aa22.24■■□□□ 1.15
HPS3-206ENST00000486530 SLC18A3Q16572 532 aa22.24■■□□□ 1.15
HPS3-206ENST00000486530 GABBR1Q9UBS5 961 aa22.24■■□□□ 1.15
HPS3-206ENST00000486530 FBXO40Q9UH90 709 aa22.24■■□□□ 1.15
HPS3-206ENST00000486530 SAR1BQ9Y6B6 198 aa22.24■■□□□ 1.15
HPS3-206ENST00000486530 PFASO15067 1338 aa22.24■■□□□ 1.15
HPS3-206ENST00000486530 ENC1O14682 589 aa22.24■■□□□ 1.15
HPS3-206ENST00000486530 ANO5Q75V66 913 aa22.24■■□□□ 1.15
HPS3-206ENST00000486530 HAUS6Q7Z4H7 955 aa22.24■■□□□ 1.15
HPS3-206ENST00000486530 ALS2CR12Q96Q35 445 aa22.24■■□□□ 1.15
HPS3-206ENST00000486530 SLC9A2Q9UBY0 812 aa22.24■■□□□ 1.15
HPS3-206ENST00000486530 CTAGE15A4D2H0 777 aa22.23■■□□□ 1.15
HPS3-206ENST00000486530 DCAF8L1A6NGE4 600 aa22.23■■□□□ 1.15
HPS3-206ENST00000486530 SPATA31C2B4DYI2 1134 aa22.23■■□□□ 1.15
HPS3-206ENST00000486530 CTAGE8P0CG41 777 aa22.23■■□□□ 1.15
HPS3-206ENST00000486530 NPEPPSP55786 919 aa22.23■■□□□ 1.15
HPS3-206ENST00000486530 BFSP1Q12934 665 aa22.23■■□□□ 1.15
HPS3-206ENST00000486530 FAM102BQ5T8I3 360 aa22.23■■□□□ 1.15
HPS3-206ENST00000486530 CTAGE6Q86UF2 777 aa22.23■■□□□ 1.15
HPS3-206ENST00000486530 CTAGE4Q8IX94 777 aa22.23■■□□□ 1.15
HPS3-206ENST00000486530 PROCA1Q8NCQ7 364 aaPredicted RBP22.23■■□□□ 1.15
HPS3-206ENST00000486530 HVCN1Q96D96 273 aa22.23■■□□□ 1.15
HPS3-206ENST00000486530 SH2D3AQ9BRG2 576 aa22.23■■□□□ 1.15
HPS3-206ENST00000486530 KCNH4Q9UQ05 1017 aa22.23■■□□□ 1.15
HPS3-206ENST00000486530 DAAM1Q9Y4D1 1078 aa22.23■■□□□ 1.15
HPS3-206ENST00000486530 MYH10P35580 1976 aa22.23■■□□□ 1.15
HPS3-206ENST00000486530 CLCN6P51797 869 aa22.22■■□□□ 1.15
HPS3-206ENST00000486530 PEX3P56589 373 aa22.22■■□□□ 1.15
HPS3-206ENST00000486530 JAM2P57087 298 aa22.22■■□□□ 1.15
HPS3-206ENST00000486530 ARID5AQ03989 594 aa22.22■■□□□ 1.15
HPS3-206ENST00000486530 LDLRAD1Q5T700 205 aa22.22■■□□□ 1.15
HPS3-206ENST00000486530 GADL1Q6ZQY3 521 aa22.22■■□□□ 1.15
HPS3-206ENST00000486530 ARMC9Q7Z3E5 817 aa22.22■■□□□ 1.15
HPS3-206ENST00000486530 RIOX2Q8IUF8 465 aa22.22■■□□□ 1.15
HPS3-206ENST00000486530 ANKRD35Q8N283 1001 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms