RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 PBX1P40424 430 aa16.1■□□□□ 0.17
POLR2J3-204ENST00000486319 PSMC5P62195 406 aa16.1■□□□□ 0.17
POLR2J3-204ENST00000486319 TMEM63BQ5T3F8 832 aa16.1■□□□□ 0.17
POLR2J3-204ENST00000486319 ARMCX5Q6P1M9 558 aa16.1■□□□□ 0.17
POLR2J3-204ENST00000486319 PPP4R3CPQ6ZMV5 832 aa16.1■□□□□ 0.17
POLR2J3-204ENST00000486319 C4orf19Q8IY42 314 aa16.1■□□□□ 0.17
POLR2J3-204ENST00000486319 VPS16Q9H269 839 aa16.1■□□□□ 0.17
POLR2J3-204ENST00000486319 OLFML3Q9NRN5 406 aa16.1■□□□□ 0.17
POLR2J3-204ENST00000486319 TAB2Q9NYJ8 693 aa16.1■□□□□ 0.17
POLR2J3-204ENST00000486319 TBC1D7Q9P0N9 293 aa16.1■□□□□ 0.17
POLR2J3-204ENST00000486319 SEL1LQ9UBV2 794 aa16.1■□□□□ 0.17
POLR2J3-204ENST00000486319 PYCARDQ9ULZ3 195 aa16.1■□□□□ 0.17
POLR2J3-204ENST00000486319 PCDHA10Q9Y5I2 948 aa16.1■□□□□ 0.17
POLR2J3-204ENST00000486319 MCM3APO60318 1980 aa16.1■□□□□ 0.17
POLR2J3-204ENST00000486319 ARID2Q68CP9 1835 aa16.1■□□□□ 0.17
POLR2J3-204ENST00000486319 A0A1W2PQ45 241 aaPredicted RBP16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 A0A1W2PQY0 241 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 TEX33O43247 280 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 CCNE2O96020 404 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 ASGR1P07306 291 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 SKILP12757 684 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 NKX3-2P78367 333 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 BEX3Q00994 111 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 ARID5BQ14865 1188 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 FSCN1Q16658 493 aaKnown RBP16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 SEPT14Q6ZU15 432 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 SFR1Q86XK3 245 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 GLIS3Q8NEA6 775 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 CCDC112Q8NEF3 446 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 SCFD1Q8WVM8 642 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 CNOT6LQ96LI5 555 aaKnown RBP16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 GLT1D1Q96MS3 346 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 ZEB2O60315 1214 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 TXNP10599 105 aaKnown RBP16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 RTP1P59025 263 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 CCZ1BP86790 482 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 CCZ1P86791 482 aaPredicted RBP16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 FKBP3Q00688 224 aaKnown RBP16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 TTLL4Q14679 1199 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 NOLC1Q14978 699 aaKnown RBP eCLIP16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 ZCWPW2Q504Y3 356 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 EPM2AIP1Q7L775 607 aaPredicted RBP16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 VTI1AQ96AJ9 217 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 CCDC43Q96MW1 224 aaKnown RBP16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 TUBGCP2Q9BSJ2 902 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 TIPINQ9BVW5 301 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 PARVGQ9HBI0 331 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 JPH1Q9HDC5 661 aaPredicted RBP16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 STARD7Q9NQZ5 370 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 ANKEF1Q9NU02 776 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 SLC9A2Q9UBY0 812 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 ZMYND8Q9ULU4 1186 aaPredicted RBP16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 ATP11BQ9Y2G3 1177 aa16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.09■□□□□ 0.17
POLR2J3-204ENST00000486319 FRMPD3Q5JV73 1810 aa16.08■□□□□ 0.16
POLR2J3-204ENST00000486319 LGALS16A8MUM7 142 aa16.08■□□□□ 0.16
POLR2J3-204ENST00000486319 RSPH10B2B2RC85 870 aa16.08■□□□□ 0.16
POLR2J3-204ENST00000486319 ZBTB39O15060 712 aa16.08■□□□□ 0.16
POLR2J3-204ENST00000486319 NKRFO15226 690 aaKnown RBP eCLIP16.08■□□□□ 0.16
POLR2J3-204ENST00000486319 PSAPP07602 524 aa16.08■□□□□ 0.16
POLR2J3-204ENST00000486319 RSPH10BP0C881 870 aa16.08■□□□□ 0.16
POLR2J3-204ENST00000486319 SYN1P17600 705 aa16.08■□□□□ 0.16
POLR2J3-204ENST00000486319 YWHABP31946 246 aaKnown RBP16.08■□□□□ 0.16
POLR2J3-204ENST00000486319 MTIF2P46199 727 aaKnown RBP16.08■□□□□ 0.16
POLR2J3-204ENST00000486319 RARRES1P49788 294 aa16.08■□□□□ 0.16
POLR2J3-204ENST00000486319 DNM2P50570 870 aa16.08■□□□□ 0.16
POLR2J3-204ENST00000486319 ZNF131P52739 623 aa16.08■□□□□ 0.16
POLR2J3-204ENST00000486319 TRIM14Q14142 442 aa16.08■□□□□ 0.16
POLR2J3-204ENST00000486319 BMT2Q1RMZ1 405 aa16.08■□□□□ 0.16
POLR2J3-204ENST00000486319 TRIM60Q495X7 471 aa16.08■□□□□ 0.16
POLR2J3-204ENST00000486319 C1orf53Q5VUE5 145 aa16.08■□□□□ 0.16
POLR2J3-204ENST00000486319 PADI6Q6TGC4 694 aa16.08■□□□□ 0.16
POLR2J3-204ENST00000486319 STXBP4Q6ZWJ1 553 aa16.08■□□□□ 0.16
POLR2J3-204ENST00000486319 PPFIBP1Q86W92 1011 aa16.08■□□□□ 0.16
POLR2J3-204ENST00000486319 ATP6V0A1Q93050 837 aa16.08■□□□□ 0.16
POLR2J3-204ENST00000486319 CEP63Q96MT8 703 aa16.08■□□□□ 0.16
POLR2J3-204ENST00000486319 MRPL44Q9H9J2 332 aaKnown RBP16.08■□□□□ 0.16
POLR2J3-204ENST00000486319 EIF3DO15371 548 aaKnown RBP eCLIP16.07■□□□□ 0.16
POLR2J3-204ENST00000486319 GNA14O95837 355 aa16.07■□□□□ 0.16
POLR2J3-204ENST00000486319 TPM1P09493 284 aa16.07■□□□□ 0.16
POLR2J3-204ENST00000486319 PRKCSHP14314 528 aaPredicted RBP16.07■□□□□ 0.16
POLR2J3-204ENST00000486319 UBXN1Q04323 297 aa16.07■□□□□ 0.16
POLR2J3-204ENST00000486319 SNX17Q15036 470 aa16.07■□□□□ 0.16
POLR2J3-204ENST00000486319 EDRF1Q3B7T1 1238 aa16.07■□□□□ 0.16
POLR2J3-204ENST00000486319 MYCT1Q8N699 235 aa16.07■□□□□ 0.16
POLR2J3-204ENST00000486319 OR6J1Q8NGC5 347 aa16.07■□□□□ 0.16
POLR2J3-204ENST00000486319 ZNF507Q8TCN5 953 aa16.07■□□□□ 0.16
POLR2J3-204ENST00000486319 FGFBP2Q9BYJ0 223 aa16.07■□□□□ 0.16
POLR2J3-204ENST00000486319 KCTD10Q9H3F6 313 aa16.07■□□□□ 0.16
POLR2J3-204ENST00000486319 SPTLC3Q9NUV7 552 aa16.07■□□□□ 0.16
POLR2J3-204ENST00000486319 UBE4BO95155 1302 aa16.07■□□□□ 0.16
POLR2J3-204ENST00000486319 A0A1W2PQC6 194 aa16.06■□□□□ 0.16
POLR2J3-204ENST00000486319 CALUO43852 315 aaPredicted RBP16.06■□□□□ 0.16
POLR2J3-204ENST00000486319 ARIH2O95376 493 aa16.06■□□□□ 0.16
POLR2J3-204ENST00000486319 KCNJ6P48051 423 aa16.06■□□□□ 0.16
POLR2J3-204ENST00000486319 CPT1AP50416 773 aa16.06■□□□□ 0.16
POLR2J3-204ENST00000486319 PTPN21Q16825 1174 aa16.06■□□□□ 0.16
POLR2J3-204ENST00000486319 LY6KQ17RY6 165 aa16.06■□□□□ 0.16
POLR2J3-204ENST00000486319 KNOP1Q1ED39 458 aaKnown RBP16.06■□□□□ 0.16
POLR2J3-204ENST00000486319 CCDC62Q6P9F0 684 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms